RNA–Protein interactions for RNA: ENST00000622250.4

CNTNAP4-209, Transcript of contactin associated protein like 4, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP4, Length 3,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4-209ENST00000622250 KIF2CQ99661 725 aa8.4□□□□□ -1.07
CNTNAP4-209ENST00000622250 CCDC61Q9Y6R9 512 aa8.4□□□□□ -1.07
CNTNAP4-209ENST00000622250 MCM2P49736 904 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 PDCL3Q9H2J4 239 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 NLRP1Q9C000 1473 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 VPS37CA5D8V6 355 aaPredicted RBP8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 LMBRD1Q9NUN5 540 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 SMC3Q9UQE7 1217 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 MYOM2P54296 1465 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 GNAI3P08754 354 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 UBTFL1P0CB47 393 aaPredicted RBP8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 NUTM1Q86Y26 1132 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 BCL11BQ9C0K0 894 aaPredicted RBP8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 TAOK2Q9UL54 1235 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 ASXL2Q76L83 1435 aa8.39□□□□□ -1.07
CNTNAP4-209ENST00000622250 MX1P20591 662 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 CCT4P50991 539 aaKnown RBP8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 PDE1AP54750 535 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 FGD1P98174 961 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 OFD1O75665 1012 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 LMOD2Q6P5Q4 547 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 IL13P35225 146 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 HSP90AB2PQ58FF8 381 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 LRSAM1Q6UWE0 723 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 ZNF830Q96NB3 372 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 DIAPH3Q9NSV4 1193 aa8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 NAP1L2Q9ULW6 460 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP4-209ENST00000622250 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 OSCARQ8IYS5 282 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 CYB5RLQ6IPT4 315 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 DDX54Q8TDD1 881 aaKnown RBP8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 MAP3K4Q9Y6R4 1608 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 DTNBO60941 627 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 CCDC30Q5VVM6 783 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 SPC24Q8NBT2 197 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 USP25Q9UHP3 1055 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 ATP6V1DQ9Y5K8 247 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 ABCC4O15439 1325 aa8.37□□□□□ -1.07
CNTNAP4-209ENST00000622250 ZNF445P59923 1031 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 G2E3Q7L622 706 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 WDR33Q9C0J8 1336 aaKnown RBP8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 ZFYVE16Q7Z3T8 1539 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 IQGAP1P46940 1657 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 FOXO3O43524 673 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 CWC27Q6UX04 472 aaKnown RBP8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 PPP1R9BQ96SB3 815 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 GPT2Q8TD30 523 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 ZKSCAN5Q9Y2L8 839 aa8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 LRRFIP2Q9Y608 721 aaKnown RBP8.36□□□□□ -1.07
CNTNAP4-209ENST00000622250 EIF4A2Q14240 407 aaKnown RBP8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 MAP7D2Q96T17 732 aa8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 SPHKAPQ2M3C7 1700 aa8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 ABCA6Q8N139 1617 aa8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 RNF17Q9BXT8 1623 aaKnown RBP8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 PTPRCP08575 1304 aa8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 PDIA4P13667 645 aaKnown RBP8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 ESYT1Q9BSJ8 1104 aa8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 NOL7Q9UMY1 257 aaKnown RBP8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 YTHDC2Q9H6S0 1430 aaKnown RBP8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 SRGAP3O43295 1099 aa8.35□□□□□ -1.07
CNTNAP4-209ENST00000622250 IQSEC2Q5JU85 1478 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 MSH6P52701 1360 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 NLRP6P59044 892 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 HDGFL1Q5TGJ6 251 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 USP48Q86UV5 1035 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 C9orf78Q9NZ63 289 aaPredicted RBP8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 GOLGA6L6A8MZA4 724 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 DDIT3P35638 169 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 FLIIQ13045 1269 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 CCDC9Q9Y3X0 531 aaKnown RBP8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 TET3O43151 1660 aa8.34□□□□□ -1.07
CNTNAP4-209ENST00000622250 HCLS1P14317 486 aaPredicted RBP8.34□□□□□ -1.08
CNTNAP4-209ENST00000622250 ZKSCAN1P17029 563 aaPredicted RBP8.34□□□□□ -1.08
CNTNAP4-209ENST00000622250 FAM69CQ0P6D2 419 aa8.34□□□□□ -1.08
CNTNAP4-209ENST00000622250 CNTROBQ8N137 903 aa8.34□□□□□ -1.08
CNTNAP4-209ENST00000622250 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.08
CNTNAP4-209ENST00000622250 SPG7Q9UQ90 795 aa8.34□□□□□ -1.08
CNTNAP4-209ENST00000622250 IFIT2P09913 472 aaKnown RBP8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 BRPF1P55201 1214 aaPredicted RBP8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 GPATCH3Q96I76 525 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 TTC12Q9H892 705 aaPredicted RBP8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 SASS6Q6UVJ0 657 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 FERMT3Q86UX7 667 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 CCDC83Q8IWF9 413 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 RUFY2Q8WXA3 655 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 GADD45BO75293 160 aaPredicted RBP8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 ADCY5O95622 1261 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 CASTP20810 708 aaKnown RBP8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 ZRSR1Q15695 479 aaKnown RBP8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 SLC26A8Q96RN1 970 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 SRCIN1Q9C0H9 1055 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 PALD1Q9ULE6 856 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 CNPY2Q9Y2B0 182 aa8.33□□□□□ -1.08
CNTNAP4-209ENST00000622250 ZFYVE9O95405 1425 aa8.32□□□□□ -1.08
CNTNAP4-209ENST00000622250 RIMS2Q9UQ26 1411 aa8.32□□□□□ -1.08
CNTNAP4-209ENST00000622250 CHL1O00533 1208 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms