RNA–Protein interactions for RNA: ENST00000621036.4

CYFIP1-212, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 3

Gene CYFIP1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-212ENST00000621036 KCNQ4P56696 695 aa13.67□□□□□ -0.22
CYFIP1-212ENST00000621036 YBX3P16989 372 aaKnown RBP eCLIP13.66□□□□□ -0.222e-8■□□□□ 9
CYFIP1-212ENST00000621036 TFCP2L1Q9NZI6 479 aa13.66□□□□□ -0.22
CYFIP1-212ENST00000621036 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
CYFIP1-212ENST00000621036 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
CYFIP1-212ENST00000621036 SLC27A3Q5K4L6 730 aa13.65□□□□□ -0.22
CYFIP1-212ENST00000621036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
CYFIP1-212ENST00000621036 ANKRD24Q8TF21 1146 aa13.65□□□□□ -0.22
CYFIP1-212ENST00000621036 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
CYFIP1-212ENST00000621036 BTAF1O14981 1849 aa13.64□□□□□ -0.23
CYFIP1-212ENST00000621036 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
CYFIP1-212ENST00000621036 GRIN3BO60391 1043 aa13.63□□□□□ -0.23
CYFIP1-212ENST00000621036 NME9Q86XW9 330 aa13.63□□□□□ -0.23
CYFIP1-212ENST00000621036 DDX54Q8TDD1 881 aaKnown RBP13.63□□□□□ -0.23
CYFIP1-212ENST00000621036 USP31Q70CQ4 1352 aa13.62□□□□□ -0.23
CYFIP1-212ENST00000621036 SYTL4Q96C24 671 aaPredicted RBP13.62□□□□□ -0.23
CYFIP1-212ENST00000621036 PRIM1P49642 420 aaKnown RBP13.61□□□□□ -0.23
CYFIP1-212ENST00000621036 ATP10DQ9P241 1426 aa13.61□□□□□ -0.23
CYFIP1-212ENST00000621036 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
CYFIP1-212ENST00000621036 L3MBTL2Q969R5 705 aa13.6□□□□□ -0.23
CYFIP1-212ENST00000621036 COL24A1Q17RW2 1714 aa13.59□□□□□ -0.23
CYFIP1-212ENST00000621036 COL23A1Q86Y22 540 aaPredicted RBP13.59□□□□□ -0.23
CYFIP1-212ENST00000621036 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.23
CYFIP1-212ENST00000621036 MSL1Q68DK7 614 aa13.58□□□□□ -0.24
CYFIP1-212ENST00000621036 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
CYFIP1-212ENST00000621036 GPBP1L1Q9HC44 474 aaPredicted RBP13.58□□□□□ -0.24
CYFIP1-212ENST00000621036 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
CYFIP1-212ENST00000621036 QSER1Q2KHR3 1735 aa13.58□□□□□ -0.24
CYFIP1-212ENST00000621036 NSD2O96028 1365 aa13.58□□□□□ -0.24
CYFIP1-212ENST00000621036 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
CYFIP1-212ENST00000621036 HSPA6P17066 643 aa13.57□□□□□ -0.24
CYFIP1-212ENST00000621036 ZNF526Q8TF50 670 aaPredicted RBP13.57□□□□□ -0.24
CYFIP1-212ENST00000621036 ROCK2O75116 1388 aaKnown RBP13.57□□□□□ -0.24
CYFIP1-212ENST00000621036 IP6K1Q92551 441 aa13.56□□□□□ -0.24
CYFIP1-212ENST00000621036 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
CYFIP1-212ENST00000621036 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
CYFIP1-212ENST00000621036 TMC1Q8TDI8 760 aa13.55□□□□□ -0.24
CYFIP1-212ENST00000621036 MON2Q7Z3U7 1717 aa13.54□□□□□ -0.24
CYFIP1-212ENST00000621036 HDGFL2Q7Z4V5 671 aaPredicted RBP13.54□□□□□ -0.24
CYFIP1-212ENST00000621036 CD2APQ9Y5K6 639 aa13.54□□□□□ -0.24
CYFIP1-212ENST00000621036 ADCY9O60503 1353 aa13.54□□□□□ -0.24
CYFIP1-212ENST00000621036 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
CYFIP1-212ENST00000621036 LTN1O94822 1766 aa13.53□□□□□ -0.24
CYFIP1-212ENST00000621036 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
CYFIP1-212ENST00000621036 SLC12A5Q9H2X9 1139 aa13.53□□□□□ -0.24
CYFIP1-212ENST00000621036 USP47Q96K76 1375 aa13.52□□□□□ -0.25
CYFIP1-212ENST00000621036 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
CYFIP1-212ENST00000621036 EDC4Q6P2E9 1401 aaKnown RBP13.51□□□□□ -0.25
CYFIP1-212ENST00000621036 FKBP8Q14318 412 aa13.51□□□□□ -0.25
CYFIP1-212ENST00000621036 SIN3AQ96ST3 1273 aa13.51□□□□□ -0.25
CYFIP1-212ENST00000621036 WWC3Q9ULE0 1092 aa13.51□□□□□ -0.25
CYFIP1-212ENST00000621036 LY75O60449 1722 aa13.5□□□□□ -0.25
CYFIP1-212ENST00000621036 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
CYFIP1-212ENST00000621036 MEGF6O75095 1541 aa13.5□□□□□ -0.25
CYFIP1-212ENST00000621036 FBLN1P23142 703 aa13.5□□□□□ -0.25
CYFIP1-212ENST00000621036 HOXC9P31274 260 aa13.5□□□□□ -0.25
CYFIP1-212ENST00000621036 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
CYFIP1-212ENST00000621036 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
CYFIP1-212ENST00000621036 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
CYFIP1-212ENST00000621036 IGSF1Q8N6C5 1336 aa13.48□□□□□ -0.25
CYFIP1-212ENST00000621036 KIF3CO14782 793 aa13.48□□□□□ -0.25
CYFIP1-212ENST00000621036 AMPHP49418 695 aa13.48□□□□□ -0.25
CYFIP1-212ENST00000621036 FLAD1Q8NFF5 587 aa13.48□□□□□ -0.25
CYFIP1-212ENST00000621036 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
CYFIP1-212ENST00000621036 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
CYFIP1-212ENST00000621036 USHBP1Q8N6Y0 703 aa13.47□□□□□ -0.25
CYFIP1-212ENST00000621036 FAM208AQ9UK61 1670 aaKnown RBP13.47□□□□□ -0.25
CYFIP1-212ENST00000621036 NBPF6Q5VWK0 638 aa13.46□□□□□ -0.25
CYFIP1-212ENST00000621036 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
CYFIP1-212ENST00000621036 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
CYFIP1-212ENST00000621036 COG3Q96JB2 828 aa13.46□□□□□ -0.25
CYFIP1-212ENST00000621036 NBPF4Q96M43 638 aa13.46□□□□□ -0.25
CYFIP1-212ENST00000621036 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
CYFIP1-212ENST00000621036 GOLGB1Q14789 3259 aaKnown RBP13.45□□□□□ -0.26
CYFIP1-212ENST00000621036 PITPNM1O00562 1244 aa13.45□□□□□ -0.26
CYFIP1-212ENST00000621036 PHF14O94880 888 aa13.44□□□□□ -0.26
CYFIP1-212ENST00000621036 MPRIPQ6WCQ1 1025 aa13.44□□□□□ -0.26
CYFIP1-212ENST00000621036 RAPGEF4Q8WZA2 1011 aa13.44□□□□□ -0.26
CYFIP1-212ENST00000621036 AK7Q96M32 723 aa13.44□□□□□ -0.26
CYFIP1-212ENST00000621036 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
CYFIP1-212ENST00000621036 APLP1P51693 650 aa13.43□□□□□ -0.26
CYFIP1-212ENST00000621036 CGNL1Q0VF96 1302 aa13.42□□□□□ -0.26
CYFIP1-212ENST00000621036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
CYFIP1-212ENST00000621036 TATP17735 454 aaPredicted RBP13.42□□□□□ -0.26
CYFIP1-212ENST00000621036 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
CYFIP1-212ENST00000621036 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
CYFIP1-212ENST00000621036 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
CYFIP1-212ENST00000621036 DNAJC5GQ8N7S2 189 aa13.42□□□□□ -0.26
CYFIP1-212ENST00000621036 C5P01031 1676 aa13.42□□□□□ -0.26
CYFIP1-212ENST00000621036 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
CYFIP1-212ENST00000621036 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
CYFIP1-212ENST00000621036 PCDH11XQ9BZA7 1347 aa13.4□□□□□ -0.26
CYFIP1-212ENST00000621036 PCDH11YQ9BZA8 1340 aa13.4□□□□□ -0.26
CYFIP1-212ENST00000621036 CYP27B1O15528 508 aa13.4□□□□□ -0.26
CYFIP1-212ENST00000621036 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
CYFIP1-212ENST00000621036 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
CYFIP1-212ENST00000621036 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
CYFIP1-212ENST00000621036 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
CYFIP1-212ENST00000621036 TOMM70O94826 608 aa13.39□□□□□ -0.27
CYFIP1-212ENST00000621036 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms