RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 PANK2Q9BZ23 570 aa10.07□□□□□ -0.8
GDNF-208ENST00000620847 TTC21BQ7Z4L5 1316 aa10.07□□□□□ -0.8
GDNF-208ENST00000620847 ISY1Q9ULR0 285 aaKnown RBP10.07□□□□□ -0.8
GDNF-208ENST00000620847 FMN2Q9NZ56 1722 aa10.07□□□□□ -0.8
GDNF-208ENST00000620847 CHL1O00533 1208 aa10.07□□□□□ -0.8
GDNF-208ENST00000620847 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
GDNF-208ENST00000620847 DCTPP1Q9H773 170 aa10.07□□□□□ -0.8
GDNF-208ENST00000620847 KIAA0232Q92628 1395 aa10.06□□□□□ -0.8
GDNF-208ENST00000620847 ATP10DQ9P241 1426 aa10.06□□□□□ -0.8
GDNF-208ENST00000620847 TRIM44Q96DX7 344 aaPredicted RBP10.06□□□□□ -0.8
GDNF-208ENST00000620847 ESF1Q9H501 851 aaKnown RBP10.06□□□□□ -0.8
GDNF-208ENST00000620847 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
GDNF-208ENST00000620847 USP6P35125 1406 aa10.06□□□□□ -0.8
GDNF-208ENST00000620847 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
GDNF-208ENST00000620847 PLEKHM2Q8IWE5 1019 aa10.06□□□□□ -0.8
GDNF-208ENST00000620847 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
GDNF-208ENST00000620847 ACEP12821 1306 aa10.06□□□□□ -0.8
GDNF-208ENST00000620847 USP31Q70CQ4 1352 aa10.06□□□□□ -0.8
GDNF-208ENST00000620847 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
GDNF-208ENST00000620847 ESPNB1AK53 854 aa10.05□□□□□ -0.8
GDNF-208ENST00000620847 CDC45O75419 566 aa10.05□□□□□ -0.8
GDNF-208ENST00000620847 GSPT1P15170 499 aaKnown RBP10.05□□□□□ -0.8
GDNF-208ENST00000620847 CD2BP2O95400 341 aaKnown RBP10.05□□□□□ -0.8
GDNF-208ENST00000620847 CRB1P82279 1406 aa10.05□□□□□ -0.8
GDNF-208ENST00000620847 SSH2Q76I76 1423 aa10.05□□□□□ -0.8
GDNF-208ENST00000620847 ANKRD44Q8N8A2 993 aa10.05□□□□□ -0.8
GDNF-208ENST00000620847 GRPEL1Q9HAV7 217 aa10.05□□□□□ -0.8
GDNF-208ENST00000620847 HSP90AB1P08238 724 aaKnown RBP10.04□□□□□ -0.8
GDNF-208ENST00000620847 KRT24Q2M2I5 525 aa10.04□□□□□ -0.8
GDNF-208ENST00000620847 PLEKHG1Q9ULL1 1385 aa10.04□□□□□ -0.8
GDNF-208ENST00000620847 PTPRCP08575 1304 aa10.04□□□□□ -0.8
GDNF-208ENST00000620847 MCM10Q7L590 875 aa10.04□□□□□ -0.8
GDNF-208ENST00000620847 RAB3GAP1Q15042 981 aa10.03□□□□□ -0.8
GDNF-208ENST00000620847 HSP90AB2PQ58FF8 381 aa10.03□□□□□ -0.8
GDNF-208ENST00000620847 TTC22Q5TAA0 569 aa10.03□□□□□ -0.8
GDNF-208ENST00000620847 RPAP2Q8IXW5 612 aaPredicted RBP10.03□□□□□ -0.8
GDNF-208ENST00000620847 TNPO1Q92973 898 aaKnown RBP10.03□□□□□ -0.8
GDNF-208ENST00000620847 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
GDNF-208ENST00000620847 RIMS1Q86UR5 1692 aaKnown RBP10.03□□□□□ -0.8
GDNF-208ENST00000620847 RTL1A6NKG5 1358 aa10.03□□□□□ -0.8
GDNF-208ENST00000620847 MSH6P52701 1360 aa10.03□□□□□ -0.8
GDNF-208ENST00000620847 CEP85Q6P2H3 762 aa10.03□□□□□ -0.8
GDNF-208ENST00000620847 ARHGEF10O15013 1369 aa10.03□□□□□ -0.8
GDNF-208ENST00000620847 TPM2P07951 284 aa10.02□□□□□ -0.81
GDNF-208ENST00000620847 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.81
GDNF-208ENST00000620847 PTPRUQ92729 1446 aa10.02□□□□□ -0.81
GDNF-208ENST00000620847 LTKP29376 864 aa10.01□□□□□ -0.81
GDNF-208ENST00000620847 C16orf71Q8IYS4 520 aaPredicted RBP10.01□□□□□ -0.81
GDNF-208ENST00000620847 RGPD8O14715 1765 aaPredicted RBP10.01□□□□□ -0.81
GDNF-208ENST00000620847 GBP4Q96PP9 640 aa10□□□□□ -0.81
GDNF-208ENST00000620847 MAP3K19Q56UN5 1328 aa10□□□□□ -0.81
GDNF-208ENST00000620847 KDRP35968 1356 aa10□□□□□ -0.81
GDNF-208ENST00000620847 MEIS3Q99687 375 aa10□□□□□ -0.81
GDNF-208ENST00000620847 LRRC37A3O60309 1634 aa10□□□□□ -0.81
GDNF-208ENST00000620847 TTC21AQ8NDW8 1320 aa10□□□□□ -0.81
GDNF-208ENST00000620847 NUTM2FA1L443 756 aa10□□□□□ -0.81
GDNF-208ENST00000620847 GAS2L2Q8NHY3 880 aa10□□□□□ -0.81
GDNF-208ENST00000620847 OTUD7AQ8TE49 926 aaPredicted RBP10□□□□□ -0.81
GDNF-208ENST00000620847 USP26Q9BXU7 913 aa10□□□□□ -0.81
GDNF-208ENST00000620847 SBNO1A3KN83 1393 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 PIK3C2AO00443 1686 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 PTMSP20962 102 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 RABEP1Q15276 862 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 MTHFSDQ2M296 383 aaKnown RBP9.99□□□□□ -0.81
GDNF-208ENST00000620847 SKOR2Q2VWA4 1001 aaPredicted RBP9.99□□□□□ -0.81
GDNF-208ENST00000620847 FLT4P35916 1363 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 TUBGCP6Q96RT7 1819 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 CLEC17AQ6ZS10 378 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 PDCL3Q9H2J4 239 aa9.99□□□□□ -0.81
GDNF-208ENST00000620847 FAM208AQ9UK61 1670 aaKnown RBP9.98□□□□□ -0.81
GDNF-208ENST00000620847 CEP170BQ9Y4F5 1589 aaPredicted RBP9.98□□□□□ -0.81
GDNF-208ENST00000620847 FOXO3O43524 673 aa9.98□□□□□ -0.81
GDNF-208ENST00000620847 SDSP20132 328 aa9.98□□□□□ -0.81
GDNF-208ENST00000620847 FOXD4L1Q9NU39 408 aa9.98□□□□□ -0.81
GDNF-208ENST00000620847 SLIT1O75093 1534 aa9.98□□□□□ -0.81
GDNF-208ENST00000620847 AK9Q5TCS8 1911 aa9.98□□□□□ -0.81
GDNF-208ENST00000620847 DIP2AQ14689 1571 aa9.98□□□□□ -0.81
GDNF-208ENST00000620847 SMARCA5O60264 1052 aaPredicted RBP9.98□□□□□ -0.81
GDNF-208ENST00000620847 ANP32BQ92688 251 aaKnown RBP9.98□□□□□ -0.81
GDNF-208ENST00000620847 MIS18AQ9NYP9 233 aa9.98□□□□□ -0.81
GDNF-208ENST00000620847 MARF1Q9Y4F3 1742 aaKnown RBP9.98□□□□□ -0.81
GDNF-208ENST00000620847 N4BP2Q86UW6 1770 aaPredicted RBP9.98□□□□□ -0.81
GDNF-208ENST00000620847 XRN1Q8IZH2 1706 aaKnown RBP9.98□□□□□ -0.81
GDNF-208ENST00000620847 IGSF1Q8N6C5 1336 aa9.97□□□□□ -0.81
GDNF-208ENST00000620847 CACNA1FO60840 1977 aa9.97□□□□□ -0.81
GDNF-208ENST00000620847 TSPYL4Q9UJ04 414 aa9.97□□□□□ -0.81
GDNF-208ENST00000620847 ARHGAP23Q9P227 1491 aa9.97□□□□□ -0.81
GDNF-208ENST00000620847 G2E3Q7L622 706 aa9.97□□□□□ -0.81
GDNF-208ENST00000620847 USP54Q70EL1 1684 aa9.97□□□□□ -0.81
GDNF-208ENST00000620847 SOX12O15370 315 aa9.96□□□□□ -0.81
GDNF-208ENST00000620847 CCT4P50991 539 aaKnown RBP9.96□□□□□ -0.81
GDNF-208ENST00000620847 RTF1Q92541 710 aaKnown RBP9.96□□□□□ -0.81
GDNF-208ENST00000620847 SLC26A8Q96RN1 970 aa9.96□□□□□ -0.81
GDNF-208ENST00000620847 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.81
GDNF-208ENST00000620847 HMMRO75330 724 aa9.96□□□□□ -0.81
GDNF-208ENST00000620847 SSFA2P28290 1259 aa9.96□□□□□ -0.81
GDNF-208ENST00000620847 EYA1Q99502 592 aa9.96□□□□□ -0.81
GDNF-208ENST00000620847 AMOTL2Q9Y2J4 779 aa9.96□□□□□ -0.81
GDNF-208ENST00000620847 ERBB4Q15303 1308 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms