RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 SKAP1Q86WV1 359 aa14.59□□□□□ -0.07
TP53-226ENST00000620739 CLUAP1Q96AJ1 413 aa14.59□□□□□ -0.07
TP53-226ENST00000620739 GCP02774 474 aa14.58□□□□□ -0.08
TP53-226ENST00000620739 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
TP53-226ENST00000620739 MTHFSDQ2M296 383 aaKnown RBP14.57□□□□□ -0.08
TP53-226ENST00000620739 TSPYL6Q8N831 410 aa14.57□□□□□ -0.08
TP53-226ENST00000620739 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.57□□□□□ -0.08
TP53-226ENST00000620739 CABLES1Q8TDN4 633 aa14.57□□□□□ -0.08
TP53-226ENST00000620739 TCERG1O14776 1098 aaKnown RBP14.56□□□□□ -0.08
TP53-226ENST00000620739 RLBP1P12271 317 aa14.56□□□□□ -0.08
TP53-226ENST00000620739 COG6Q9Y2V7 657 aa14.56□□□□□ -0.08
TP53-226ENST00000620739 MST1RQ04912 1400 aa14.56□□□□□ -0.08
TP53-226ENST00000620739 ZC3H6P61129 1189 aaKnown RBP14.56□□□□□ -0.08
TP53-226ENST00000620739 LRRC59Q96AG4 307 aaKnown RBP14.56□□□□□ -0.08
TP53-226ENST00000620739 SSH1Q8WYL5 1049 aa14.55□□□□□ -0.08
TP53-226ENST00000620739 MBIPQ9NS73 344 aa14.55□□□□□ -0.08
TP53-226ENST00000620739 MIS18AQ9NYP9 233 aa14.55□□□□□ -0.08
TP53-226ENST00000620739 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
TP53-226ENST00000620739 NBPF6Q5VWK0 638 aa14.54□□□□□ -0.08
TP53-226ENST00000620739 CADPS2Q86UW7 1296 aa14.54□□□□□ -0.08
TP53-226ENST00000620739 IPO4Q8TEX9 1081 aaKnown RBP14.54□□□□□ -0.08
TP53-226ENST00000620739 NBPF4Q96M43 638 aa14.54□□□□□ -0.08
TP53-226ENST00000620739 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
TP53-226ENST00000620739 IL16Q14005 1332 aa14.54□□□□□ -0.08
TP53-226ENST00000620739 IGSF1Q8N6C5 1336 aa14.54□□□□□ -0.08
TP53-226ENST00000620739 MARF1Q9Y4F3 1742 aaKnown RBP14.54□□□□□ -0.08
TP53-226ENST00000620739 KRT24Q2M2I5 525 aa14.54□□□□□ -0.08
TP53-226ENST00000620739 ZFP91Q96JP5 570 aaPredicted RBP14.54□□□□□ -0.08
TP53-226ENST00000620739 IP6K1Q92551 441 aa14.53□□□□□ -0.08
TP53-226ENST00000620739 SMC4Q9NTJ3 1288 aa14.53□□□□□ -0.08
TP53-226ENST00000620739 STRCQ7RTU9 1775 aa14.53□□□□□ -0.08
TP53-226ENST00000620739 RTL5Q5HYW3 569 aaPredicted RBP14.52□□□□□ -0.08
TP53-226ENST00000620739 C8orf58Q8NAV2 365 aa14.52□□□□□ -0.08
TP53-226ENST00000620739 MSH6P52701 1360 aa14.52□□□□□ -0.09
TP53-226ENST00000620739 ZNF853P0CG23 659 aa14.52□□□□□ -0.09
TP53-226ENST00000620739 GTF2E1P29083 439 aaPredicted RBP14.52□□□□□ -0.09
TP53-226ENST00000620739 ARHGEF25Q86VW2 580 aa14.52□□□□□ -0.09
TP53-226ENST00000620739 KCNH5Q8NCM2 988 aa14.52□□□□□ -0.09
TP53-226ENST00000620739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.51□□□□□ -0.09
TP53-226ENST00000620739 ARHGEF10O15013 1369 aa14.51□□□□□ -0.09
TP53-226ENST00000620739 GNAI1P63096 354 aa14.5□□□□□ -0.09
TP53-226ENST00000620739 BRINP3Q76B58 766 aa14.5□□□□□ -0.09
TP53-226ENST00000620739 KDRP35968 1356 aa14.5□□□□□ -0.09
TP53-226ENST00000620739 IFT57Q9NWB7 429 aa14.5□□□□□ -0.09
TP53-226ENST00000620739 NOB1Q9ULX3 412 aaKnown RBP14.5□□□□□ -0.09
TP53-226ENST00000620739 VAMP4O75379 141 aa14.49□□□□□ -0.09
TP53-226ENST00000620739 LMOD3Q0VAK6 560 aa14.49□□□□□ -0.09
TP53-226ENST00000620739 PDE3AQ14432 1141 aa14.49□□□□□ -0.09
TP53-226ENST00000620739 HSP90AA2PQ14568 343 aaPredicted RBP14.49□□□□□ -0.09
TP53-226ENST00000620739 NFAT5O94916 1531 aa14.49□□□□□ -0.09
TP53-226ENST00000620739 SLAIN2Q9P270 581 aa14.49□□□□□ -0.09
TP53-226ENST00000620739 RGPD1P0DJD0 1748 aa14.48□□□□□ -0.09
TP53-226ENST00000620739 TRIM27P14373 513 aa14.48□□□□□ -0.09
TP53-226ENST00000620739 CHRNA2Q15822 529 aa14.48□□□□□ -0.09
TP53-226ENST00000620739 BCCIPQ9P287 314 aaKnown RBP eCLIP14.48□□□□□ -0.09
TP53-226ENST00000620739 ATF5Q9Y2D1 282 aaPredicted RBP14.48□□□□□ -0.09
TP53-226ENST00000620739 CALD1Q05682 793 aaKnown RBP14.47□□□□□ -0.09
TP53-226ENST00000620739 NPHP3Q7Z494 1330 aa14.47□□□□□ -0.09
TP53-226ENST00000620739 TWISTNBQ3B726 338 aaPredicted RBP14.47□□□□□ -0.09
TP53-226ENST00000620739 USP19O94966 1318 aa14.47□□□□□ -0.09
TP53-226ENST00000620739 RRP9O43818 475 aaKnown RBP14.46□□□□□ -0.09
TP53-226ENST00000620739 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.09
TP53-226ENST00000620739 RTF1Q92541 710 aaKnown RBP14.46□□□□□ -0.09
TP53-226ENST00000620739 DLG5Q8TDM6 1919 aa14.46□□□□□ -0.09
TP53-226ENST00000620739 CHL1O00533 1208 aa14.46□□□□□ -0.09
TP53-226ENST00000620739 ZKSCAN2Q63HK3 967 aa14.46□□□□□ -0.09
TP53-226ENST00000620739 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.09
TP53-226ENST00000620739 IGHDP01880 384 aa14.45□□□□□ -0.1
TP53-226ENST00000620739 CT47B1P0C2W7 299 aaPredicted RBP14.45□□□□□ -0.1
TP53-226ENST00000620739 IL17REQ8NFR9 667 aa14.45□□□□□ -0.1
TP53-226ENST00000620739 DCCP43146 1447 aa14.45□□□□□ -0.1
TP53-226ENST00000620739 NCOA3Q9Y6Q9 1424 aa14.45□□□□□ -0.1
TP53-226ENST00000620739 PRDM4Q9UKN5 801 aa14.45□□□□□ -0.1
TP53-226ENST00000620739 CDK11BP21127 795 aaKnown RBP14.44□□□□□ -0.1
TP53-226ENST00000620739 FTSJ3Q8IY81 847 aaKnown RBP14.44□□□□□ -0.1
TP53-226ENST00000620739 DZIP1LQ8IYY4 767 aaKnown RBP14.44□□□□□ -0.1
TP53-226ENST00000620739 ATF7IPQ6VMQ6 1270 aa14.44□□□□□ -0.1
TP53-226ENST00000620739 GAS2L2Q8NHY3 880 aa14.44□□□□□ -0.1
TP53-226ENST00000620739 BRPF3Q9ULD4 1205 aa14.44□□□□□ -0.1
TP53-226ENST00000620739 LTN1O94822 1766 aa14.44□□□□□ -0.1
TP53-226ENST00000620739 RTL1A6NKG5 1358 aa14.44□□□□□ -0.1
TP53-226ENST00000620739 GNAT3A8MTJ3 354 aa14.43□□□□□ -0.1
TP53-226ENST00000620739 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
TP53-226ENST00000620739 NOP58Q9Y2X3 529 aaKnown RBP14.43□□□□□ -0.1
TP53-226ENST00000620739 TRPM3Q9HCF6 1732 aaPredicted RBP14.43□□□□□ -0.1
TP53-226ENST00000620739 CRB1P82279 1406 aa14.43□□□□□ -0.1
TP53-226ENST00000620739 LGR6Q9HBX8 967 aa14.43□□□□□ -0.1
TP53-226ENST00000620739 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
TP53-226ENST00000620739 SPATA31A3Q5VYP0 1347 aa14.43□□□□□ -0.1
TP53-226ENST00000620739 KDM2BQ8NHM5 1336 aa14.43□□□□□ -0.1
TP53-226ENST00000620739 SECISBP2LQ93073 1101 aaKnown RBP14.42□□□□□ -0.1
TP53-226ENST00000620739 MED1Q15648 1581 aaPredicted RBP14.42□□□□□ -0.1
TP53-226ENST00000620739 XIRP1Q702N8 1843 aaKnown RBP14.42□□□□□ -0.1
TP53-226ENST00000620739 TMEM57Q8N5G2 664 aa14.42□□□□□ -0.1
TP53-226ENST00000620739 TSPYL4Q9UJ04 414 aa14.42□□□□□ -0.1
TP53-226ENST00000620739 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
TP53-226ENST00000620739 MRPL50Q8N5N7 158 aaKnown RBP14.41□□□□□ -0.1
TP53-226ENST00000620739 USP54Q70EL1 1684 aa14.41□□□□□ -0.1
TP53-226ENST00000620739 HSP90B1P14625 803 aaKnown RBP14.41□□□□□ -0.1
TP53-226ENST00000620739 MVPQ14764 893 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms