RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 TOGARAM1Q9Y4F4 1720 aa14.6□□□□□ -0.07
TARDBP-223ENST00000620632 BCL9O00512 1426 aa14.59□□□□□ -0.07
TARDBP-223ENST00000620632 FAM196AQ6ZSG2 479 aa14.59□□□□□ -0.07
TARDBP-223ENST00000620632 PTF1AQ7RTS3 328 aa14.59□□□□□ -0.07
TARDBP-223ENST00000620632 RAPGEF4Q8WZA2 1011 aa14.59□□□□□ -0.07
TARDBP-223ENST00000620632 KDRP35968 1356 aa14.59□□□□□ -0.07
TARDBP-223ENST00000620632 VIRMAQ69YN4 1812 aaKnown RBP14.58□□□□□ -0.08
TARDBP-223ENST00000620632 DIAPH1O60610 1272 aaKnown RBP14.58□□□□□ -0.08
TARDBP-223ENST00000620632 TRIM37O94972 964 aa14.58□□□□□ -0.08
TARDBP-223ENST00000620632 TATP17735 454 aaPredicted RBP14.58□□□□□ -0.08
TARDBP-223ENST00000620632 ZCRB1Q8TBF4 217 aaKnown RBP14.58□□□□□ -0.08
TARDBP-223ENST00000620632 BTAF1O14981 1849 aa14.57□□□□□ -0.08
TARDBP-223ENST00000620632 SULT6B1Q6IMI4 303 aa14.57□□□□□ -0.08
TARDBP-223ENST00000620632 DDX54Q8TDD1 881 aaKnown RBP14.57□□□□□ -0.08
TARDBP-223ENST00000620632 ITGB4P16144 1822 aa14.57□□□□□ -0.08
TARDBP-223ENST00000620632 DEFB132Q7Z7B7 95 aa14.56□□□□□ -0.08
TARDBP-223ENST00000620632 CYP27B1O15528 508 aa14.55□□□□□ -0.08
TARDBP-223ENST00000620632 HMOX1P09601 288 aa14.55□□□□□ -0.08
TARDBP-223ENST00000620632 RALBP1Q15311 655 aa14.55□□□□□ -0.08
TARDBP-223ENST00000620632 KCNQ2O43526 872 aa14.54□□□□□ -0.08
TARDBP-223ENST00000620632 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
TARDBP-223ENST00000620632 ACSBG1Q96GR2 724 aa14.54□□□□□ -0.08
TARDBP-223ENST00000620632 PRKRIP1Q9H875 184 aaPredicted RBP14.54□□□□□ -0.08
TARDBP-223ENST00000620632 RREB1Q92766 1687 aa14.54□□□□□ -0.08
TARDBP-223ENST00000620632 RGPD3A6NKT7 1758 aaPredicted RBP14.53□□□□□ -0.08
TARDBP-223ENST00000620632 RGPD4Q7Z3J3 1758 aa14.53□□□□□ -0.08
TARDBP-223ENST00000620632 PCDH11XQ9BZA7 1347 aa14.53□□□□□ -0.08
TARDBP-223ENST00000620632 PCDH11YQ9BZA8 1340 aa14.53□□□□□ -0.08
TARDBP-223ENST00000620632 PLEKHG2Q9H7P9 1386 aa14.52□□□□□ -0.08
TARDBP-223ENST00000620632 MYBBP1AQ9BQG0 1328 aaKnown RBP14.52□□□□□ -0.08
TARDBP-223ENST00000620632 U2SURPO15042 1029 aaKnown RBP14.52□□□□□ -0.09
TARDBP-223ENST00000620632 CFAP53Q96M91 514 aa14.52□□□□□ -0.09
TARDBP-223ENST00000620632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.097e-10■■□□□ 14.4
TARDBP-223ENST00000620632 NUP188Q5SRE5 1749 aa14.52□□□□□ -0.09
TARDBP-223ENST00000620632 EN1Q05925 392 aaPredicted RBP14.51□□□□□ -0.09
TARDBP-223ENST00000620632 SPG7Q9UQ90 795 aa14.51□□□□□ -0.09
TARDBP-223ENST00000620632 SCN11AQ9UI33 1791 aa14.51□□□□□ -0.09
TARDBP-223ENST00000620632 APBA3O96018 575 aa14.5□□□□□ -0.09
TARDBP-223ENST00000620632 PHKG2P15735 406 aa14.5□□□□□ -0.09
TARDBP-223ENST00000620632 SF3B2Q13435 895 aaKnown RBP14.5□□□□□ -0.09
TARDBP-223ENST00000620632 BCL11BQ9C0K0 894 aaPredicted RBP14.5□□□□□ -0.09
TARDBP-223ENST00000620632 RSPH6AQ9H0K4 717 aa14.49□□□□□ -0.09
TARDBP-223ENST00000620632 LY75O60449 1722 aa14.49□□□□□ -0.09
TARDBP-223ENST00000620632 KDM6AO15550 1401 aaPredicted RBP14.49□□□□□ -0.09
TARDBP-223ENST00000620632 BAG6P46379 1132 aa14.48□□□□□ -0.09
TARDBP-223ENST00000620632 PRIM1P49642 420 aaKnown RBP14.48□□□□□ -0.09
TARDBP-223ENST00000620632 NKX1-1Q15270 411 aaPredicted RBP14.48□□□□□ -0.09
TARDBP-223ENST00000620632 EZH2Q15910 746 aaKnown RBP14.48□□□□□ -0.09
TARDBP-223ENST00000620632 PLEKHO1Q53GL0 409 aaPredicted RBP14.48□□□□□ -0.09
TARDBP-223ENST00000620632 CAMKK2Q96RR4 588 aa14.48□□□□□ -0.09
TARDBP-223ENST00000620632 DLG5Q8TDM6 1919 aa14.48□□□□□ -0.09
TARDBP-223ENST00000620632 ADAMTS7Q9UKP4 1686 aa14.48□□□□□ -0.09
TARDBP-223ENST00000620632 U2AF1L5P0DN76 240 aaPredicted RBP14.47□□□□□ -0.09
TARDBP-223ENST00000620632 U2AF1Q01081 240 aaKnown RBP eCLIP14.47□□□□□ -0.093e-7■■■□□ 15.3
TARDBP-223ENST00000620632 ZNF530Q6P9A1 599 aaPredicted RBP14.47□□□□□ -0.09
TARDBP-223ENST00000620632 IFNL2Q8IZJ0 200 aa14.47□□□□□ -0.09
TARDBP-223ENST00000620632 PRKAR2BP31323 418 aa14.46□□□□□ -0.09
TARDBP-223ENST00000620632 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
TARDBP-223ENST00000620632 AMOTQ4VCS5 1084 aa14.46□□□□□ -0.09
TARDBP-223ENST00000620632 CCDC184Q52MB2 194 aa14.46□□□□□ -0.09
TARDBP-223ENST00000620632 PHACTR3Q96KR7 559 aa14.46□□□□□ -0.09
TARDBP-223ENST00000620632 NUDCQ9Y266 331 aa14.46□□□□□ -0.09
TARDBP-223ENST00000620632 SYTL4Q96C24 671 aaPredicted RBP14.45□□□□□ -0.1
TARDBP-223ENST00000620632 PLSCR1O15162 318 aa14.44□□□□□ -0.1
TARDBP-223ENST00000620632 PROM2Q8N271 834 aa14.44□□□□□ -0.1
TARDBP-223ENST00000620632 SIPA1L3O60292 1781 aaPredicted RBP14.43□□□□□ -0.1
TARDBP-223ENST00000620632 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
TARDBP-223ENST00000620632 FCHSD2O94868 740 aa14.42□□□□□ -0.1
TARDBP-223ENST00000620632 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
TARDBP-223ENST00000620632 MPRIPQ6WCQ1 1025 aa14.42□□□□□ -0.1
TARDBP-223ENST00000620632 PLEKHF1Q96S99 279 aa14.42□□□□□ -0.1
TARDBP-223ENST00000620632 TAF1LQ8IZX4 1826 aa14.42□□□□□ -0.1
TARDBP-223ENST00000620632 MRC1P22897 1456 aa14.42□□□□□ -0.1
TARDBP-223ENST00000620632 ANP32CO43423 234 aa14.41□□□□□ -0.1
TARDBP-223ENST00000620632 C1orf141Q5JVX7 400 aa14.41□□□□□ -0.1
TARDBP-223ENST00000620632 PIGBQ92521 554 aa14.41□□□□□ -0.1
TARDBP-223ENST00000620632 DCAF5Q96JK2 942 aa14.41□□□□□ -0.1
TARDBP-223ENST00000620632 LGR6Q9HBX8 967 aa14.41□□□□□ -0.1
TARDBP-223ENST00000620632 TXNRD1Q16881 649 aa14.4□□□□□ -0.1
TARDBP-223ENST00000620632 TUBGCP6Q96RT7 1819 aa14.4□□□□□ -0.1
TARDBP-223ENST00000620632 MAP3K5Q99683 1374 aa14.39□□□□□ -0.11
TARDBP-223ENST00000620632 HSP90AB1P08238 724 aaKnown RBP14.39□□□□□ -0.11
TARDBP-223ENST00000620632 GAS2L2Q8NHY3 880 aa14.39□□□□□ -0.11
TARDBP-223ENST00000620632 LRRC4BQ9NT99 713 aa14.39□□□□□ -0.11
TARDBP-223ENST00000620632 C5P01031 1676 aa14.39□□□□□ -0.11
TARDBP-223ENST00000620632 ERVV-2B6SEH9 535 aa14.38□□□□□ -0.11
TARDBP-223ENST00000620632 RNMTO43148 476 aaKnown RBP14.38□□□□□ -0.11
TARDBP-223ENST00000620632 KCNQ4P56696 695 aa14.38□□□□□ -0.11
TARDBP-223ENST00000620632 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
TARDBP-223ENST00000620632 TMOD3Q9NYL9 352 aa14.38□□□□□ -0.11
TARDBP-223ENST00000620632 ASAP1Q9ULH1 1129 aa14.38□□□□□ -0.11
TARDBP-223ENST00000620632 PALLDQ8WX93 1383 aa14.37□□□□□ -0.11
TARDBP-223ENST00000620632 IL17REQ8NFR9 667 aa14.37□□□□□ -0.11
TARDBP-223ENST00000620632 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
TARDBP-223ENST00000620632 UBR2Q8IWV8 1755 aa14.37□□□□□ -0.11
TARDBP-223ENST00000620632 GNAT3A8MTJ3 354 aa14.36□□□□□ -0.11
TARDBP-223ENST00000620632 CCDC146Q8IYE0 955 aa14.36□□□□□ -0.11
TARDBP-223ENST00000620632 ATG3Q9NT62 314 aa14.36□□□□□ -0.11
TARDBP-223ENST00000620632 CABP4P57796 275 aa14.35□□□□□ -0.11
TARDBP-223ENST00000620632 NFATC2IPQ8NCF5 419 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms