RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 USP17L11C9JVI0 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L21D6R901 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L18D6R9N7 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L22D6RA61 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L17D6RBQ6 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L19D6RCP7 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L20D6RJB6 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 ATG7O95352 703 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 RASA1P20936 1047 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 WDR4P57081 412 aaKnown RBP6.68□□□□□ -1.34
MALAT1-216ENST00000620465 GTF2IP78347 998 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 USP17L24Q0WX57 530 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 LARP1Q6PKG0 1096 aaKnown RBP6.68□□□□□ -1.34
MALAT1-216ENST00000620465 OGFOD1Q8N543 542 aa6.68□□□□□ -1.34
MALAT1-216ENST00000620465 ACIN1Q9UKV3 1341 aaKnown RBP6.68□□□□□ -1.34
MALAT1-216ENST00000620465 LILRA1O75019 489 aa6.67□□□□□ -1.34
MALAT1-216ENST00000620465 ZIC2O95409 532 aaPredicted RBP6.67□□□□□ -1.34
MALAT1-216ENST00000620465 CLDN10P78369 228 aa6.67□□□□□ -1.34
MALAT1-216ENST00000620465 PSME1Q06323 249 aa6.67□□□□□ -1.34
MALAT1-216ENST00000620465 CYP2U1Q7Z449 544 aa6.67□□□□□ -1.34
MALAT1-216ENST00000620465 ITPKCQ96DU7 683 aa6.67□□□□□ -1.34
MALAT1-216ENST00000620465 DNAAF2Q9NVR5 837 aaKnown RBP6.67□□□□□ -1.34
MALAT1-216ENST00000620465 FAM187AA6NFU0 413 aa6.66□□□□□ -1.34
MALAT1-216ENST00000620465 CSB-PGBD3P0DP91 1061 aa6.66□□□□□ -1.34
MALAT1-216ENST00000620465 TIMP2P16035 220 aa6.66□□□□□ -1.34
MALAT1-216ENST00000620465 PTK7Q13308 1070 aa6.66□□□□□ -1.34
MALAT1-216ENST00000620465 ELOAQ14241 798 aaKnown RBP6.66□□□□□ -1.34
MALAT1-216ENST00000620465 CRTC2Q53ET0 693 aaPredicted RBP6.66□□□□□ -1.34
MALAT1-216ENST00000620465 LARGE2Q8N3Y3 721 aa6.66□□□□□ -1.34
MALAT1-216ENST00000620465 HPS1Q92902 700 aa6.66□□□□□ -1.34
MALAT1-216ENST00000620465 ZNF594Q96JF6 807 aaPredicted RBP6.66□□□□□ -1.34
MALAT1-216ENST00000620465 KLF16Q9BXK1 252 aaPredicted RBP6.66□□□□□ -1.34
MALAT1-216ENST00000620465 OSBPL3Q9H4L5 887 aa6.66□□□□□ -1.34
MALAT1-216ENST00000620465 PCDHGA11Q9Y5H2 935 aa6.66□□□□□ -1.34
MALAT1-216ENST00000620465 NRG2O14511 850 aaPredicted RBP6.65□□□□□ -1.34
MALAT1-216ENST00000620465 ADH1AP07327 375 aa6.65□□□□□ -1.34
MALAT1-216ENST00000620465 SIX5Q8N196 739 aa6.65□□□□□ -1.34
MALAT1-216ENST00000620465 RETREG2Q8NC44 543 aa6.65□□□□□ -1.34
MALAT1-216ENST00000620465 ZFAND3Q9H8U3 227 aa6.65□□□□□ -1.34
MALAT1-216ENST00000620465 NOVA2Q9UNW9 492 aaKnown RBP6.65□□□□□ -1.34
MALAT1-216ENST00000620465 RBM19Q9Y4C8 960 aaKnown RBP6.65□□□□□ -1.34
MALAT1-216ENST00000620465 ANKMY2Q8IV38 441 aa6.64□□□□□ -1.35
MALAT1-216ENST00000620465 TPCN2Q8NHX9 752 aa6.64□□□□□ -1.35
MALAT1-216ENST00000620465 KIAA1024Q9UPX6 916 aa6.64□□□□□ -1.35
MALAT1-216ENST00000620465 USTQ9Y2C2 406 aa6.64□□□□□ -1.35
MALAT1-216ENST00000620465 GFRA3O60609 400 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 GNRH1P01148 92 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
MALAT1-216ENST00000620465 CBLBQ13191 982 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 LAPTM4AQ15012 233 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 PKDCCQ504Y2 493 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 CCDC102BQ68D86 513 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 Q6ZVU0 165 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 MEIOBQ8N635 442 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 ZMIZ1Q9ULJ6 1067 aa6.63□□□□□ -1.35
MALAT1-216ENST00000620465 ZBTB7BO15156 539 aaPredicted RBP6.62□□□□□ -1.35
MALAT1-216ENST00000620465 DGAT1O75907 488 aa6.62□□□□□ -1.35
MALAT1-216ENST00000620465 PDE4CQ08493 712 aa6.62□□□□□ -1.35
MALAT1-216ENST00000620465 DPYDQ12882 1025 aa6.62□□□□□ -1.35
MALAT1-216ENST00000620465 ESCO1Q5FWF5 840 aa6.62□□□□□ -1.35
MALAT1-216ENST00000620465 FAM200AQ8TCP9 573 aa6.62□□□□□ -1.35
MALAT1-216ENST00000620465 STK32AQ8WU08 396 aa6.62□□□□□ -1.35
MALAT1-216ENST00000620465 WASLO00401 505 aaPredicted RBP6.61□□□□□ -1.35
MALAT1-216ENST00000620465 CAPN5O15484 640 aaPredicted RBP6.61□□□□□ -1.35
MALAT1-216ENST00000620465 AVPP01185 164 aa6.61□□□□□ -1.35
MALAT1-216ENST00000620465 SCNN1DP51172 638 aa6.61□□□□□ -1.35
MALAT1-216ENST00000620465 GDF10P55107 478 aa6.61□□□□□ -1.35
MALAT1-216ENST00000620465 SEC13P55735 322 aa6.61□□□□□ -1.35
MALAT1-216ENST00000620465 ARHGEF10LQ9HCE6 1279 aa6.61□□□□□ -1.35
MALAT1-216ENST00000620465 DKK1O94907 266 aa6.6□□□□□ -1.35
MALAT1-216ENST00000620465 CTC1Q2NKJ3 1217 aa6.6□□□□□ -1.35
MALAT1-216ENST00000620465 TMEM164Q5U3C3 297 aa6.6□□□□□ -1.35
MALAT1-216ENST00000620465 ETNK1Q9HBU6 452 aa6.6□□□□□ -1.35
MALAT1-216ENST00000620465 TMEM229AB2RXF0 380 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 M0R2N6 131 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 UPP2O95045 317 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 INHAP05111 366 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 PTGIRP43119 386 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 RELBQ01201 579 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 CLN3Q13286 438 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 SWI5Q1ZZU3 235 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 KDF1Q8NAX2 398 aaPredicted RBP6.59□□□□□ -1.35
MALAT1-216ENST00000620465 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 TSEN34Q9BSV6 310 aaKnown RBP6.59□□□□□ -1.35
MALAT1-216ENST00000620465 IRX2Q9BZI1 471 aaPredicted RBP6.59□□□□□ -1.35
MALAT1-216ENST00000620465 RAB6BQ9NRW1 208 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 ZNF358Q9NW07 568 aa6.59□□□□□ -1.35
MALAT1-216ENST00000620465 TMEM88BA6NKF7 163 aa6.58□□□□□ -1.36
MALAT1-216ENST00000620465 SFI1A8K8P3 1242 aa6.58□□□□□ -1.36
MALAT1-216ENST00000620465 BACH1O14867 736 aa6.58□□□□□ -1.36
MALAT1-216ENST00000620465 STAU1O95793 577 aaKnown RBP6.58□□□□□ -1.36
MALAT1-216ENST00000620465 PDIA4P13667 645 aaKnown RBP6.58□□□□□ -1.36
MALAT1-216ENST00000620465 SMCPP49901 116 aaPredicted RBP6.58□□□□□ -1.36
MALAT1-216ENST00000620465 LINC00528Q8N1L1 170 aa6.58□□□□□ -1.36
MALAT1-216ENST00000620465 CRIPAKQ8N1N5 446 aa6.58□□□□□ -1.36
MALAT1-216ENST00000620465 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
MALAT1-216ENST00000620465 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
MALAT1-216ENST00000620465 AXIN1O15169 862 aa6.57□□□□□ -1.36
MALAT1-216ENST00000620465 IL2RAP01589 272 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms