RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
DKC1-213ENST00000620277 ZC3H13Q5T200 1668 aaKnown RBP19.71■□□□□ 0.75
DKC1-213ENST00000620277 PTPRMP28827 1452 aa19.71■□□□□ 0.75
DKC1-213ENST00000620277 FAM69CQ0P6D2 419 aa19.71■□□□□ 0.75
DKC1-213ENST00000620277 RBSNQ9H1K0 784 aa19.71■□□□□ 0.75
DKC1-213ENST00000620277 TSPYL4Q9UJ04 414 aa19.71■□□□□ 0.75
DKC1-213ENST00000620277 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
DKC1-213ENST00000620277 RABEP1Q15276 862 aa19.71■□□□□ 0.75
DKC1-213ENST00000620277 ARHGAP45Q92619 1136 aa19.71■□□□□ 0.75
DKC1-213ENST00000620277 ESF1Q9H501 851 aaKnown RBP19.71■□□□□ 0.75
DKC1-213ENST00000620277 ZMYM3Q14202 1370 aa19.7■□□□□ 0.74
DKC1-213ENST00000620277 ZSCAN23Q3MJ62 389 aa19.7■□□□□ 0.74
DKC1-213ENST00000620277 CASC1Q6TDU7 716 aa19.7■□□□□ 0.74
DKC1-213ENST00000620277 MSNP26038 577 aaKnown RBP19.7■□□□□ 0.74
DKC1-213ENST00000620277 XPCQ01831 940 aaPredicted RBP19.7■□□□□ 0.74
DKC1-213ENST00000620277 SLC26A8Q96RN1 970 aa19.7■□□□□ 0.74
DKC1-213ENST00000620277 KIAA1211Q6ZU35 1233 aa19.7■□□□□ 0.74
DKC1-213ENST00000620277 ANKRD44Q8N8A2 993 aa19.7■□□□□ 0.74
DKC1-213ENST00000620277 ST18O60284 1047 aa19.69■□□□□ 0.74
DKC1-213ENST00000620277 FKBP5Q13451 457 aaPredicted RBP19.69■□□□□ 0.74
DKC1-213ENST00000620277 CCDC61Q9Y6R9 512 aa19.69■□□□□ 0.74
DKC1-213ENST00000620277 LMOD3Q0VAK6 560 aa19.69■□□□□ 0.74
DKC1-213ENST00000620277 DDX54Q8TDD1 881 aaKnown RBP19.69■□□□□ 0.74
DKC1-213ENST00000620277 PALD1Q9ULE6 856 aa19.68■□□□□ 0.74
DKC1-213ENST00000620277 PLCB2Q00722 1185 aa19.68■□□□□ 0.74
DKC1-213ENST00000620277 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
DKC1-213ENST00000620277 R3HCC1Q9Y3T6 440 aaKnown RBP19.68■□□□□ 0.74
DKC1-213ENST00000620277 RIMS2Q9UQ26 1411 aa19.67■□□□□ 0.74
DKC1-213ENST00000620277 GPT2Q8TD30 523 aa19.67■□□□□ 0.74
DKC1-213ENST00000620277 LMBRD1Q9NUN5 540 aa19.67■□□□□ 0.74
DKC1-213ENST00000620277 LMTK2Q8IWU2 1503 aa19.67■□□□□ 0.74
DKC1-213ENST00000620277 NCOA3Q9Y6Q9 1424 aa19.67■□□□□ 0.74
DKC1-213ENST00000620277 METP08581 1390 aa19.66■□□□□ 0.74
DKC1-213ENST00000620277 KLHL40Q2TBA0 621 aa19.66■□□□□ 0.74
DKC1-213ENST00000620277 NUTM1Q86Y26 1132 aa19.66■□□□□ 0.74
DKC1-213ENST00000620277 MYO5BQ9ULV0 1848 aa19.66■□□□□ 0.74
DKC1-213ENST00000620277 ZDHHC9Q9Y397 364 aa19.66■□□□□ 0.74
DKC1-213ENST00000620277 MLH3Q9UHC1 1453 aa19.65■□□□□ 0.74
DKC1-213ENST00000620277 PNMA6EA0A0J9YXQ4 647 aa19.65■□□□□ 0.74
DKC1-213ENST00000620277 EIF2S2P20042 333 aaKnown RBP19.65■□□□□ 0.74
DKC1-213ENST00000620277 NCBP3Q53F19 620 aaKnown RBP19.65■□□□□ 0.74
DKC1-213ENST00000620277 RBM33Q96EV2 1170 aaKnown RBP19.65■□□□□ 0.74
DKC1-213ENST00000620277 UNC5CLQ8IV45 518 aa19.64■□□□□ 0.73
DKC1-213ENST00000620277 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
DKC1-213ENST00000620277 PIK3C2BO00750 1634 aa19.64■□□□□ 0.73
DKC1-213ENST00000620277 MTHFSDQ2M296 383 aaKnown RBP19.64■□□□□ 0.73
DKC1-213ENST00000620277 FAM13BQ9NYF5 915 aa19.64■□□□□ 0.73
DKC1-213ENST00000620277 TMEM63CQ9P1W3 806 aa19.64■□□□□ 0.73
DKC1-213ENST00000620277 PRR36Q9H6K5 1346 aa19.63■□□□□ 0.73
DKC1-213ENST00000620277 ERC2O15083 957 aa19.63■□□□□ 0.73
DKC1-213ENST00000620277 PDE1AP54750 535 aa19.63■□□□□ 0.73
DKC1-213ENST00000620277 NUCB2P80303 420 aa19.63■□□□□ 0.73
DKC1-213ENST00000620277 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
DKC1-213ENST00000620277 ANXA1P04083 346 aa19.62■□□□□ 0.73
DKC1-213ENST00000620277 TMX3Q96JJ7 454 aa19.62■□□□□ 0.73
DKC1-213ENST00000620277 AMPHP49418 695 aa19.62■□□□□ 0.73
DKC1-213ENST00000620277 ACEP12821 1306 aa19.62■□□□□ 0.73
DKC1-213ENST00000620277 REC8O95072 547 aa19.62■□□□□ 0.73
DKC1-213ENST00000620277 PTMAP06454 111 aaKnown RBP19.62■□□□□ 0.73
DKC1-213ENST00000620277 RPAP2Q8IXW5 612 aaPredicted RBP19.62■□□□□ 0.73
DKC1-213ENST00000620277 RTL1A6NKG5 1358 aa19.62■□□□□ 0.73
DKC1-213ENST00000620277 HECW2Q9P2P5 1572 aa19.62■□□□□ 0.73
DKC1-213ENST00000620277 PTCH1Q13635 1447 aa19.61■□□□□ 0.73
DKC1-213ENST00000620277 CCDC173Q0VFZ6 552 aa19.61■□□□□ 0.73
DKC1-213ENST00000620277 CHL1O00533 1208 aa19.6■□□□□ 0.73
DKC1-213ENST00000620277 CPA1P15085 419 aa19.6■□□□□ 0.73
DKC1-213ENST00000620277 ZNF830Q96NB3 372 aaPredicted RBP19.6■□□□□ 0.73
DKC1-213ENST00000620277 ARHGEF40Q8TER5 1519 aa19.6■□□□□ 0.73
DKC1-213ENST00000620277 BRPF1P55201 1214 aaPredicted RBP19.6■□□□□ 0.73
DKC1-213ENST00000620277 IL25Q9H293 177 aa19.6■□□□□ 0.73
DKC1-213ENST00000620277 STK31Q9BXU1 1019 aa19.6■□□□□ 0.73
DKC1-213ENST00000620277 LRRFIP2Q9Y608 721 aaKnown RBP19.6■□□□□ 0.73
DKC1-213ENST00000620277 ZFYVE9O95405 1425 aa19.59■□□□□ 0.73
DKC1-213ENST00000620277 CHMP3Q9Y3E7 222 aa19.59■□□□□ 0.73
DKC1-213ENST00000620277 ZSCAN30Q86W11 494 aa19.59■□□□□ 0.73
DKC1-213ENST00000620277 MED14O60244 1454 aa19.58■□□□□ 0.73
DKC1-213ENST00000620277 HMMRO75330 724 aa19.58■□□□□ 0.73
DKC1-213ENST00000620277 CEBPAP49715 358 aaPredicted RBP19.58■□□□□ 0.73
DKC1-213ENST00000620277 NGDNQ8NEJ9 315 aaKnown RBP19.58■□□□□ 0.73
DKC1-213ENST00000620277 GADD45BO75293 160 aaPredicted RBP19.58■□□□□ 0.72
DKC1-213ENST00000620277 NEURL4Q96JN8 1562 aa19.58■□□□□ 0.72
DKC1-213ENST00000620277 MAP3K19Q56UN5 1328 aa19.58■□□□□ 0.72
DKC1-213ENST00000620277 CPS1P31327 1500 aa19.58■□□□□ 0.72
DKC1-213ENST00000620277 JARID2Q92833 1246 aaPredicted RBP19.57■□□□□ 0.72
DKC1-213ENST00000620277 USP32Q8NFA0 1604 aa19.57■□□□□ 0.72
DKC1-213ENST00000620277 ALKQ9UM73 1620 aa19.57■□□□□ 0.72
DKC1-213ENST00000620277 CFAP74Q9C0B2 1584 aa19.57■□□□□ 0.72
DKC1-213ENST00000620277 GNAI2P04899 355 aa19.56■□□□□ 0.72
DKC1-213ENST00000620277 TTC21BQ7Z4L5 1316 aa19.56■□□□□ 0.72
DKC1-213ENST00000620277 PHAXQ9H814 394 aaKnown RBP19.56■□□□□ 0.72
DKC1-213ENST00000620277 LRRCC1Q9C099 1032 aa19.55■□□□□ 0.72
DKC1-213ENST00000620277 MX1P20591 662 aa19.55■□□□□ 0.72
DKC1-213ENST00000620277 SURF6O75683 361 aaKnown RBP19.54■□□□□ 0.72
DKC1-213ENST00000620277 DNTTIP2Q5QJE6 756 aaKnown RBP19.54■□□□□ 0.72
DKC1-213ENST00000620277 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
DKC1-213ENST00000620277 ATP10DQ9P241 1426 aa19.54■□□□□ 0.72
DKC1-213ENST00000620277 PIK3R4Q99570 1358 aa19.54■□□□□ 0.72
DKC1-213ENST00000620277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.54■□□□□ 0.72
DKC1-213ENST00000620277 FLIIQ13045 1269 aa19.54■□□□□ 0.72
DKC1-213ENST00000620277 C17orf53Q8N3J3 647 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 258.4 ms