RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 IL13P35225 146 aa21.05■□□□□ 0.96
RPP40-207ENST00000618533 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
RPP40-207ENST00000618533 CFAP53Q96M91 514 aa21.05■□□□□ 0.96
RPP40-207ENST00000618533 DIAPH1O60610 1272 aaKnown RBP21.04■□□□□ 0.96
RPP40-207ENST00000618533 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
RPP40-207ENST00000618533 RALBP1Q15311 655 aa21.04■□□□□ 0.96
RPP40-207ENST00000618533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.96
RPP40-207ENST00000618533 COL3A1P02461 1466 aaPredicted RBP21.04■□□□□ 0.96
RPP40-207ENST00000618533 KDRP35968 1356 aa21.02■□□□□ 0.96
RPP40-207ENST00000618533 PCDH11XQ9BZA7 1347 aa21.02■□□□□ 0.95
RPP40-207ENST00000618533 PCDH11YQ9BZA8 1340 aa21.02■□□□□ 0.95
RPP40-207ENST00000618533 NHSQ6T4R5 1651 aa21.01■□□□□ 0.95
RPP40-207ENST00000618533 TRIM37O94972 964 aa21■□□□□ 0.95
RPP40-207ENST00000618533 BAG6P46379 1132 aa21■□□□□ 0.95
RPP40-207ENST00000618533 SPG7Q9UQ90 795 aa21■□□□□ 0.95
RPP40-207ENST00000618533 RGPD3A6NKT7 1758 aaPredicted RBP20.98■□□□□ 0.95
RPP40-207ENST00000618533 RGPD4Q7Z3J3 1758 aa20.98■□□□□ 0.95
RPP40-207ENST00000618533 DDX54Q8TDD1 881 aaKnown RBP20.98■□□□□ 0.95
RPP40-207ENST00000618533 BCL11BQ9C0K0 894 aaPredicted RBP20.98■□□□□ 0.95
RPP40-207ENST00000618533 KAT6BQ8WYB5 2073 aa20.98■□□□□ 0.95
RPP40-207ENST00000618533 AMOTQ4VCS5 1084 aa20.96■□□□□ 0.95
RPP40-207ENST00000618533 SULT6B1Q6IMI4 303 aa20.96■□□□□ 0.95
RPP40-207ENST00000618533 NUDCQ9Y266 331 aa20.96■□□□□ 0.95
RPP40-207ENST00000618533 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
RPP40-207ENST00000618533 PLEKHO1Q53GL0 409 aaPredicted RBP20.94■□□□□ 0.94
RPP40-207ENST00000618533 MYBBP1AQ9BQG0 1328 aaKnown RBP20.94■□□□□ 0.94
RPP40-207ENST00000618533 APBA3O96018 575 aa20.93■□□□□ 0.94
RPP40-207ENST00000618533 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
RPP40-207ENST00000618533 CYP27B1O15528 508 aa20.92■□□□□ 0.94
RPP40-207ENST00000618533 NKX1-1Q15270 411 aaPredicted RBP20.92■□□□□ 0.94
RPP40-207ENST00000618533 IFNL2Q8IZJ0 200 aa20.92■□□□□ 0.94
RPP40-207ENST00000618533 BTAF1O14981 1849 aa20.91■□□□□ 0.94
RPP40-207ENST00000618533 U2SURPO15042 1029 aaKnown RBP20.91■□□□□ 0.94
RPP40-207ENST00000618533 DEFB132Q7Z7B7 95 aa20.91■□□□□ 0.94
RPP40-207ENST00000618533 PRKRIP1Q9H875 184 aaPredicted RBP20.91■□□□□ 0.94
RPP40-207ENST00000618533 PLSCR1O15162 318 aa20.9■□□□□ 0.94
RPP40-207ENST00000618533 RREB1Q92766 1687 aa20.89■□□□□ 0.94
RPP40-207ENST00000618533 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.93
RPP40-207ENST00000618533 PHKG2P15735 406 aa20.89■□□□□ 0.93
RPP40-207ENST00000618533 HMOX1P09601 288 aa20.88■□□□□ 0.93
RPP40-207ENST00000618533 EN1Q05925 392 aaPredicted RBP20.88■□□□□ 0.93
RPP40-207ENST00000618533 ACSBG1Q96GR2 724 aa20.88■□□□□ 0.93
RPP40-207ENST00000618533 CAMKK2Q96RR4 588 aa20.88■□□□□ 0.93
RPP40-207ENST00000618533 ITGB4P16144 1822 aa20.88■□□□□ 0.93
RPP40-207ENST00000618533 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
RPP40-207ENST00000618533 KCNQ2O43526 872 aa20.87■□□□□ 0.93
RPP40-207ENST00000618533 C1orf141Q5JVX7 400 aa20.86■□□□□ 0.93
RPP40-207ENST00000618533 ZNF530Q6P9A1 599 aaPredicted RBP20.86■□□□□ 0.93
RPP40-207ENST00000618533 FCHSD2O94868 740 aa20.85■□□□□ 0.93
RPP40-207ENST00000618533 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
RPP40-207ENST00000618533 PRIM1P49642 420 aaKnown RBP20.84■□□□□ 0.93
RPP40-207ENST00000618533 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
RPP40-207ENST00000618533 PTF1AQ7RTS3 328 aa20.84■□□□□ 0.93
RPP40-207ENST00000618533 DCAF5Q96JK2 942 aa20.84■□□□□ 0.93
RPP40-207ENST00000618533 EZH2Q15910 746 aaKnown RBP20.83■□□□□ 0.93
RPP40-207ENST00000618533 SYTL4Q96C24 671 aaPredicted RBP20.83■□□□□ 0.93
RPP40-207ENST00000618533 RSPH6AQ9H0K4 717 aa20.83■□□□□ 0.93
RPP40-207ENST00000618533 NUP188Q5SRE5 1749 aa20.83■□□□□ 0.92
RPP40-207ENST00000618533 SCN11AQ9UI33 1791 aa20.82■□□□□ 0.92
RPP40-207ENST00000618533 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
RPP40-207ENST00000618533 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
RPP40-207ENST00000618533 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
RPP40-207ENST00000618533 GAS2L2Q8NHY3 880 aa20.81■□□□□ 0.92
RPP40-207ENST00000618533 PNNQ9H307 717 aaKnown RBP20.81■□□□□ 0.92
RPP40-207ENST00000618533 LY75O60449 1722 aa20.81■□□□□ 0.92
RPP40-207ENST00000618533 PRKAR2BP31323 418 aa20.8■□□□□ 0.92
RPP40-207ENST00000618533 ANP32CO43423 234 aa20.79■□□□□ 0.92
RPP40-207ENST00000618533 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
RPP40-207ENST00000618533 MTHFSDQ2M296 383 aaKnown RBP20.79■□□□□ 0.92
RPP40-207ENST00000618533 ADAMTS7Q9UKP4 1686 aa20.79■□□□□ 0.92
RPP40-207ENST00000618533 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
RPP40-207ENST00000618533 NEFMP07197 916 aa20.78■□□□□ 0.92
RPP40-207ENST00000618533 TMOD3Q9NYL9 352 aa20.78■□□□□ 0.92
RPP40-207ENST00000618533 TXNRD1Q16881 649 aa20.77■□□□□ 0.92
RPP40-207ENST00000618533 MPRIPQ6WCQ1 1025 aa20.77■□□□□ 0.92
RPP40-207ENST00000618533 SMARCC1Q92922 1105 aaPredicted RBP20.77■□□□□ 0.92
RPP40-207ENST00000618533 SLC27A3Q5K4L6 730 aa20.76■□□□□ 0.91
RPP40-207ENST00000618533 NBPF14Q5TI25 921 aa20.75■□□□□ 0.91
RPP40-207ENST00000618533 MAP3K5Q99683 1374 aa20.74■□□□□ 0.91
RPP40-207ENST00000618533 PROM2Q8N271 834 aa20.74■□□□□ 0.91
RPP40-207ENST00000618533 PIGBQ92521 554 aa20.74■□□□□ 0.91
RPP40-207ENST00000618533 MRC1P22897 1456 aa20.74■□□□□ 0.91
RPP40-207ENST00000618533 GNAT3A8MTJ3 354 aa20.73■□□□□ 0.91
RPP40-207ENST00000618533 CABP4P57796 275 aa20.73■□□□□ 0.91
RPP40-207ENST00000618533 PHACTR3Q96KR7 559 aa20.73■□□□□ 0.91
RPP40-207ENST00000618533 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
RPP40-207ENST00000618533 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
RPP40-207ENST00000618533 PAPPAQ13219 1627 aa20.71■□□□□ 0.91
RPP40-207ENST00000618533 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
RPP40-207ENST00000618533 MAPK8IP3Q9UPT6 1336 aa20.71■□□□□ 0.91
RPP40-207ENST00000618533 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.91
RPP40-207ENST00000618533 PLEKHF1Q96S99 279 aa20.7■□□□□ 0.9
RPP40-207ENST00000618533 DLG5Q8TDM6 1919 aa20.69■□□□□ 0.9
RPP40-207ENST00000618533 HTATSF1O43719 755 aaKnown RBP20.69■□□□□ 0.9
RPP40-207ENST00000618533 SLC52A2Q9HAB3 445 aa20.69■□□□□ 0.9
RPP40-207ENST00000618533 CCNL1Q9UK58 526 aaPredicted RBP20.68■□□□□ 0.9
RPP40-207ENST00000618533 TAF1LQ8IZX4 1826 aa20.68■□□□□ 0.9
RPP40-207ENST00000618533 C5P01031 1676 aa20.67■□□□□ 0.9
RPP40-207ENST00000618533 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
RPP40-207ENST00000618533 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms