RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 SMC5Q8IY18 1101 aa17.59■□□□□ 0.41
CBWD1-226ENST00000618061 LNPKQ9C0E8 428 aa17.59■□□□□ 0.41
CBWD1-226ENST00000618061 CRB1P82279 1406 aa17.59■□□□□ 0.41
CBWD1-226ENST00000618061 ZNF142P52746 1687 aaPredicted RBP17.59■□□□□ 0.41
CBWD1-226ENST00000618061 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
CBWD1-226ENST00000618061 BCL11AQ9H165 835 aa17.58■□□□□ 0.4
CBWD1-226ENST00000618061 KDRP35968 1356 aa17.57■□□□□ 0.4
CBWD1-226ENST00000618061 SIRT2Q8IXJ6 389 aa17.57■□□□□ 0.4
CBWD1-226ENST00000618061 DAXXQ9UER7 740 aaPredicted RBP17.57■□□□□ 0.4
CBWD1-226ENST00000618061 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
CBWD1-226ENST00000618061 PSME1Q06323 249 aa17.56■□□□□ 0.4
CBWD1-226ENST00000618061 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
CBWD1-226ENST00000618061 API5Q9BZZ5 524 aaKnown RBP17.55■□□□□ 0.4
CBWD1-226ENST00000618061 LTN1O94822 1766 aa17.55■□□□□ 0.4
CBWD1-226ENST00000618061 NUCB1Q02818 461 aa17.55■□□□□ 0.4
CBWD1-226ENST00000618061 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
CBWD1-226ENST00000618061 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
CBWD1-226ENST00000618061 ANKRD45Q5TZF3 282 aa17.54■□□□□ 0.4
CBWD1-226ENST00000618061 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
CBWD1-226ENST00000618061 CHD1LQ86WJ1 897 aa17.53■□□□□ 0.4
CBWD1-226ENST00000618061 GAS2L2Q8NHY3 880 aa17.53■□□□□ 0.4
CBWD1-226ENST00000618061 NECTIN2Q92692 538 aa17.53■□□□□ 0.4
CBWD1-226ENST00000618061 ADGRL3Q9HAR2 1447 aa17.52■□□□□ 0.4
CBWD1-226ENST00000618061 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.4
CBWD1-226ENST00000618061 G2E3Q7L622 706 aa17.52■□□□□ 0.4
CBWD1-226ENST00000618061 RGS12O14924 1447 aa17.52■□□□□ 0.39
CBWD1-226ENST00000618061 KIAA0232Q92628 1395 aa17.51■□□□□ 0.39
CBWD1-226ENST00000618061 GNAT3A8MTJ3 354 aa17.5■□□□□ 0.39
CBWD1-226ENST00000618061 MFAP1P55081 439 aaKnown RBP17.5■□□□□ 0.39
CBWD1-226ENST00000618061 F6X3S4 739 aa17.5■□□□□ 0.39
CBWD1-226ENST00000618061 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
CBWD1-226ENST00000618061 IL17REQ8NFR9 667 aa17.5■□□□□ 0.39
CBWD1-226ENST00000618061 USP54Q70EL1 1684 aa17.5■□□□□ 0.39
CBWD1-226ENST00000618061 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
CBWD1-226ENST00000618061 LRRC59Q96AG4 307 aaKnown RBP17.49■□□□□ 0.39
CBWD1-226ENST00000618061 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
CBWD1-226ENST00000618061 MSH6P52701 1360 aa17.49■□□□□ 0.39
CBWD1-226ENST00000618061 RGPD2P0DJD1 1756 aa17.49■□□□□ 0.39
CBWD1-226ENST00000618061 INTS3Q68E01 1043 aaKnown RBP17.48■□□□□ 0.39
CBWD1-226ENST00000618061 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
CBWD1-226ENST00000618061 TBC1D32Q96NH3 1257 aa17.48■□□□□ 0.39
CBWD1-226ENST00000618061 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
CBWD1-226ENST00000618061 IP6K1Q92551 441 aa17.47■□□□□ 0.39
CBWD1-226ENST00000618061 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
CBWD1-226ENST00000618061 NFAT5O94916 1531 aa17.47■□□□□ 0.39
CBWD1-226ENST00000618061 PROSER2Q86WR7 435 aaPredicted RBP17.47■□□□□ 0.39
CBWD1-226ENST00000618061 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
CBWD1-226ENST00000618061 MEIS3Q99687 375 aa17.47■□□□□ 0.39
CBWD1-226ENST00000618061 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
CBWD1-226ENST00000618061 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
CBWD1-226ENST00000618061 DEKP35659 375 aaKnown RBP17.46■□□□□ 0.39
CBWD1-226ENST00000618061 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
CBWD1-226ENST00000618061 APBB1O00213 710 aa17.45■□□□□ 0.38
CBWD1-226ENST00000618061 PTPRCP08575 1304 aa17.44■□□□□ 0.38
CBWD1-226ENST00000618061 LRRC37A3O60309 1634 aa17.44■□□□□ 0.38
CBWD1-226ENST00000618061 GCP02774 474 aa17.43■□□□□ 0.38
CBWD1-226ENST00000618061 DDX17Q92841 729 aaKnown RBP17.43■□□□□ 0.38
CBWD1-226ENST00000618061 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
CBWD1-226ENST00000618061 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
CBWD1-226ENST00000618061 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
CBWD1-226ENST00000618061 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
CBWD1-226ENST00000618061 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
CBWD1-226ENST00000618061 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
CBWD1-226ENST00000618061 NFKBIBQ15653 356 aa17.42■□□□□ 0.38
CBWD1-226ENST00000618061 CEP85Q6P2H3 762 aa17.42■□□□□ 0.38
CBWD1-226ENST00000618061 KCNH5Q8NCM2 988 aa17.42■□□□□ 0.38
CBWD1-226ENST00000618061 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
CBWD1-226ENST00000618061 SLKQ9H2G2 1235 aaPredicted RBP17.41■□□□□ 0.38
CBWD1-226ENST00000618061 SMARCA5O60264 1052 aaPredicted RBP17.4■□□□□ 0.38
CBWD1-226ENST00000618061 KRT28Q7Z3Y7 464 aa17.4■□□□□ 0.38
CBWD1-226ENST00000618061 ANKRD44Q8N8A2 993 aa17.4■□□□□ 0.38
CBWD1-226ENST00000618061 SPRYD3Q8NCJ5 442 aa17.4■□□□□ 0.38
CBWD1-226ENST00000618061 STK31Q9BXU1 1019 aa17.4■□□□□ 0.38
CBWD1-226ENST00000618061 FKBP5Q13451 457 aaPredicted RBP17.4■□□□□ 0.38
CBWD1-226ENST00000618061 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
CBWD1-226ENST00000618061 AXIN2Q9Y2T1 843 aa17.4■□□□□ 0.38
CBWD1-226ENST00000618061 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
CBWD1-226ENST00000618061 TBC1D2Q9BYX2 928 aa17.39■□□□□ 0.37
CBWD1-226ENST00000618061 KCNQ3O43525 872 aa17.39■□□□□ 0.37
CBWD1-226ENST00000618061 FLIIQ13045 1269 aa17.39■□□□□ 0.37
CBWD1-226ENST00000618061 BECN1Q14457 450 aa17.38■□□□□ 0.37
CBWD1-226ENST00000618061 BMP2KLQ5H9B9 411 aa17.38■□□□□ 0.37
CBWD1-226ENST00000618061 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
CBWD1-226ENST00000618061 MPRIPQ6WCQ1 1025 aa17.38■□□□□ 0.37
CBWD1-226ENST00000618061 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
CBWD1-226ENST00000618061 FAM208AQ9UK61 1670 aaKnown RBP17.38■□□□□ 0.37
CBWD1-226ENST00000618061 ZC3H6P61129 1189 aaKnown RBP17.38■□□□□ 0.37
CBWD1-226ENST00000618061 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
CBWD1-226ENST00000618061 ANKRD24Q8TF21 1146 aa17.37■□□□□ 0.37
CBWD1-226ENST00000618061 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
CBWD1-226ENST00000618061 GSPT1P15170 499 aaKnown RBP17.36■□□□□ 0.37
CBWD1-226ENST00000618061 ZNF530Q6P9A1 599 aaPredicted RBP17.36■□□□□ 0.37
CBWD1-226ENST00000618061 PLEKHM2Q8IWE5 1019 aa17.36■□□□□ 0.37
CBWD1-226ENST00000618061 C1orf167Q5SNV9 1468 aa17.36■□□□□ 0.37
CBWD1-226ENST00000618061 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
CBWD1-226ENST00000618061 RGPD5Q99666 1765 aa17.36■□□□□ 0.37
CBWD1-226ENST00000618061 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
CBWD1-226ENST00000618061 TBC1D9Q6ZT07 1266 aa17.35■□□□□ 0.37
CBWD1-226ENST00000618061 C19orf44Q9H6X5 657 aa17.35■□□□□ 0.37
CBWD1-226ENST00000618061 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms