RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 RBM17Q96I25 401 aaKnown RBP13.26□□□□□ -0.29
POLR2A-209ENST00000617998 CCDC47Q96A33 483 aaKnown RBP13.26□□□□□ -0.29
POLR2A-209ENST00000617998 SIL1Q9H173 461 aa13.26□□□□□ -0.29
POLR2A-209ENST00000617998 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
POLR2A-209ENST00000617998 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
POLR2A-209ENST00000617998 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
POLR2A-209ENST00000617998 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
POLR2A-209ENST00000617998 GCP02774 474 aa13.25□□□□□ -0.29
POLR2A-209ENST00000617998 TNNI2P48788 182 aa13.25□□□□□ -0.29
POLR2A-209ENST00000617998 IFIT5Q13325 482 aaKnown RBP13.25□□□□□ -0.29
POLR2A-209ENST00000617998 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
POLR2A-209ENST00000617998 ZSCAN25Q6NSZ9 544 aa13.25□□□□□ -0.29
POLR2A-209ENST00000617998 NPHP4O75161 1426 aaPredicted RBP13.25□□□□□ -0.29
POLR2A-209ENST00000617998 ANKRD18BA2A2Z9 1011 aa13.25□□□□□ -0.29
POLR2A-209ENST00000617998 H3BQV1 296 aa13.25□□□□□ -0.29
POLR2A-209ENST00000617998 ZKSCAN1P17029 563 aaPredicted RBP13.25□□□□□ -0.29
POLR2A-209ENST00000617998 IFFO2Q5TF58 517 aa13.25□□□□□ -0.29
POLR2A-209ENST00000617998 ANKRD45Q5TZF3 282 aa13.25□□□□□ -0.29
POLR2A-209ENST00000617998 RPRD2Q5VT52 1461 aaKnown RBP13.25□□□□□ -0.29
POLR2A-209ENST00000617998 H7C1D1 291 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 BRMS1Q9HCU9 246 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 ADGRF5Q8IZF2 1346 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 PDE6BP35913 854 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 NIM1KQ8IY84 436 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 NOC3LQ8WTT2 800 aaKnown RBP13.24□□□□□ -0.29
POLR2A-209ENST00000617998 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
POLR2A-209ENST00000617998 MIER1Q8N108 512 aa13.23□□□□□ -0.29
POLR2A-209ENST00000617998 SUPT20HQ8NEM7 779 aa13.23□□□□□ -0.29
POLR2A-209ENST00000617998 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
POLR2A-209ENST00000617998 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
POLR2A-209ENST00000617998 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
POLR2A-209ENST00000617998 CCDC152Q4G0S7 254 aa13.23□□□□□ -0.29
POLR2A-209ENST00000617998 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
POLR2A-209ENST00000617998 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
POLR2A-209ENST00000617998 MYD88Q99836 296 aa13.23□□□□□ -0.29
POLR2A-209ENST00000617998 F8W031 263 aaPredicted RBP13.23□□□□□ -0.29
POLR2A-209ENST00000617998 PTMAP06454 111 aaKnown RBP13.23□□□□□ -0.29
POLR2A-209ENST00000617998 XBP1P17861 261 aa13.23□□□□□ -0.29
POLR2A-209ENST00000617998 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
POLR2A-209ENST00000617998 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
POLR2A-209ENST00000617998 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
POLR2A-209ENST00000617998 NEO1Q92859 1461 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 LDHCP07864 332 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 SLC5A1P13866 664 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 TAF7Q15545 349 aaPredicted RBP13.22□□□□□ -0.29
POLR2A-209ENST00000617998 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 HLA-DOAP06340 250 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 WDR70Q9NW82 654 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 PPM1FP49593 454 aaPredicted RBP13.22□□□□□ -0.29
POLR2A-209ENST00000617998 FSD1Q9BTV5 496 aa13.22□□□□□ -0.29
POLR2A-209ENST00000617998 ZNF76P36508 570 aa13.21□□□□□ -0.29
POLR2A-209ENST00000617998 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.29
POLR2A-209ENST00000617998 PES1O00541 588 aaKnown RBP13.21□□□□□ -0.29
POLR2A-209ENST00000617998 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.29
POLR2A-209ENST00000617998 ANKRD18AQ8IVF6 992 aa13.21□□□□□ -0.29
POLR2A-209ENST00000617998 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
POLR2A-209ENST00000617998 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
POLR2A-209ENST00000617998 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.3
POLR2A-209ENST00000617998 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.3
POLR2A-209ENST00000617998 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.3
POLR2A-209ENST00000617998 OTUD7BQ6GQQ9 843 aa13.21□□□□□ -0.3
POLR2A-209ENST00000617998 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
POLR2A-209ENST00000617998 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
POLR2A-209ENST00000617998 ARAP1Q96P48 1450 aa13.2□□□□□ -0.3
POLR2A-209ENST00000617998 TDO2P48775 406 aa13.2□□□□□ -0.3
POLR2A-209ENST00000617998 SOGA3Q5TF21 947 aa13.19□□□□□ -0.3
POLR2A-209ENST00000617998 TTC21BQ7Z4L5 1316 aa13.19□□□□□ -0.3
POLR2A-209ENST00000617998 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
POLR2A-209ENST00000617998 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
POLR2A-209ENST00000617998 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
POLR2A-209ENST00000617998 TPD52L1Q16890 204 aaPredicted RBP13.19□□□□□ -0.3
POLR2A-209ENST00000617998 MKNK2Q9HBH9 465 aa13.19□□□□□ -0.3
POLR2A-209ENST00000617998 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
POLR2A-209ENST00000617998 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
POLR2A-209ENST00000617998 TRIM44Q96DX7 344 aaPredicted RBP13.19□□□□□ -0.3
POLR2A-209ENST00000617998 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
POLR2A-209ENST00000617998 C14orf93Q9H972 538 aaKnown RBP13.18□□□□□ -0.3
POLR2A-209ENST00000617998 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
POLR2A-209ENST00000617998 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
POLR2A-209ENST00000617998 NUP160Q12769 1436 aa13.18□□□□□ -0.3
POLR2A-209ENST00000617998 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
POLR2A-209ENST00000617998 GPBP1L1Q9HC44 474 aaPredicted RBP13.18□□□□□ -0.3
POLR2A-209ENST00000617998 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
POLR2A-209ENST00000617998 TNIP1Q15025 636 aa13.17□□□□□ -0.3
POLR2A-209ENST00000617998 ZNF804AQ7Z570 1209 aa13.17□□□□□ -0.3
POLR2A-209ENST00000617998 BAG3O95817 575 aa13.17□□□□□ -0.3
POLR2A-209ENST00000617998 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
POLR2A-209ENST00000617998 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 TPM2P07951 284 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 PRKG1Q13976 671 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 ZBTB7AO95365 584 aa13.16□□□□□ -0.3
POLR2A-209ENST00000617998 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms