RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 IFT57Q9NWB7 429 aa22.03■■□□□ 1.12
AC008878.3-201ENST00000617428 PCF11O94913 1555 aaKnown RBP22.03■■□□□ 1.12
AC008878.3-201ENST00000617428 ZNF396Q96N95 335 aaPredicted RBP22.02■■□□□ 1.12
AC008878.3-201ENST00000617428 KRT18P05783 430 aaKnown RBP22.02■■□□□ 1.12
AC008878.3-201ENST00000617428 MYD88Q99836 296 aa22.02■■□□□ 1.12
AC008878.3-201ENST00000617428 TMEM132AQ24JP5 1023 aa22.02■■□□□ 1.12
AC008878.3-201ENST00000617428 FANCAO15360 1455 aa22.02■■□□□ 1.11
AC008878.3-201ENST00000617428 CTNNA3Q9UI47 895 aa22.01■■□□□ 1.11
AC008878.3-201ENST00000617428 EXOC5O00471 708 aa22.01■■□□□ 1.11
AC008878.3-201ENST00000617428 UBAC1Q9BSL1 405 aa22.01■■□□□ 1.11
AC008878.3-201ENST00000617428 MBD3O95983 291 aa22.01■■□□□ 1.11
AC008878.3-201ENST00000617428 F6X3S4 739 aa22■■□□□ 1.11
AC008878.3-201ENST00000617428 ODF2Q5BJF6 829 aa22■■□□□ 1.11
AC008878.3-201ENST00000617428 JMYQ8N9B5 988 aa22■■□□□ 1.11
AC008878.3-201ENST00000617428 NOS1P29475 1434 aa21.99■■□□□ 1.11
AC008878.3-201ENST00000617428 TRAK2O60296 914 aa21.99■■□□□ 1.11
AC008878.3-201ENST00000617428 SOGA3Q5TF21 947 aa21.99■■□□□ 1.11
AC008878.3-201ENST00000617428 JAKMIP1Q96N16 626 aaKnown RBP21.99■■□□□ 1.11
AC008878.3-201ENST00000617428 KIF14Q15058 1648 aa21.99■■□□□ 1.11
AC008878.3-201ENST00000617428 ZFYVE27Q5T4F4 411 aa21.99■■□□□ 1.11
AC008878.3-201ENST00000617428 KIF1BPQ96EK5 621 aa21.98■■□□□ 1.11
AC008878.3-201ENST00000617428 C14orf93Q9H972 538 aaKnown RBP21.98■■□□□ 1.11
AC008878.3-201ENST00000617428 AIDAQ96BJ3 306 aa21.98■■□□□ 1.11
AC008878.3-201ENST00000617428 TRIM5Q9C035 493 aa21.98■■□□□ 1.11
AC008878.3-201ENST00000617428 LARP1BQ659C4 914 aaKnown RBP21.98■■□□□ 1.11
AC008878.3-201ENST00000617428 HMGB2P26583 209 aaKnown RBP21.98■■□□□ 1.11
AC008878.3-201ENST00000617428 GPS2Q13227 327 aa21.98■■□□□ 1.11
AC008878.3-201ENST00000617428 CADPS2Q86UW7 1296 aa21.98■■□□□ 1.11
AC008878.3-201ENST00000617428 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
AC008878.3-201ENST00000617428 BICRAQ9NZM4 1560 aa21.97■■□□□ 1.11
AC008878.3-201ENST00000617428 CHRNA2Q15822 529 aa21.97■■□□□ 1.11
AC008878.3-201ENST00000617428 TRMT112Q9UI30 125 aaKnown RBP21.97■■□□□ 1.11
AC008878.3-201ENST00000617428 DHX29Q7Z478 1369 aaKnown RBP21.97■■□□□ 1.11
AC008878.3-201ENST00000617428 ME1P48163 572 aa21.96■■□□□ 1.11
AC008878.3-201ENST00000617428 NASPP49321 788 aaPredicted RBP21.96■■□□□ 1.11
AC008878.3-201ENST00000617428 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
AC008878.3-201ENST00000617428 IFIT1P09914 478 aaKnown RBP21.96■■□□□ 1.11
AC008878.3-201ENST00000617428 RARSP54136 660 aaKnown RBP21.96■■□□□ 1.11
AC008878.3-201ENST00000617428 BRPF1P55201 1214 aaPredicted RBP21.95■■□□□ 1.1
AC008878.3-201ENST00000617428 TNNT3P45378 269 aaPredicted RBP21.95■■□□□ 1.1
AC008878.3-201ENST00000617428 ZHX3Q9H4I2 956 aa21.95■■□□□ 1.1
AC008878.3-201ENST00000617428 PDRG1Q9NUG6 133 aa21.95■■□□□ 1.1
AC008878.3-201ENST00000617428 ACEP12821 1306 aa21.95■■□□□ 1.1
AC008878.3-201ENST00000617428 TMOD2Q9NZR1 351 aa21.95■■□□□ 1.1
AC008878.3-201ENST00000617428 DBF4Q9UBU7 674 aaPredicted RBP21.95■■□□□ 1.1
AC008878.3-201ENST00000617428 AKAP2Q9Y2D5 859 aa21.95■■□□□ 1.1
AC008878.3-201ENST00000617428 IFIT5Q13325 482 aaKnown RBP21.94■■□□□ 1.1
AC008878.3-201ENST00000617428 BOLA2Q9H3K6 86 aa21.94■■□□□ 1.1
AC008878.3-201ENST00000617428 PIBF1Q8WXW3 757 aa21.94■■□□□ 1.1
AC008878.3-201ENST00000617428 ZBTB3Q9H5J0 574 aa21.94■■□□□ 1.1
AC008878.3-201ENST00000617428 DNAAF4Q8WXU2 420 aa21.94■■□□□ 1.1
AC008878.3-201ENST00000617428 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
AC008878.3-201ENST00000617428 PTPN23Q9H3S7 1636 aa21.94■■□□□ 1.1
AC008878.3-201ENST00000617428 CAVIN4Q5BKX8 364 aa21.94■■□□□ 1.1
AC008878.3-201ENST00000617428 SMARCA5O60264 1052 aaPredicted RBP21.93■■□□□ 1.1
AC008878.3-201ENST00000617428 GLRX3O76003 335 aaKnown RBP21.93■■□□□ 1.1
AC008878.3-201ENST00000617428 SMC2O95347 1197 aa21.93■■□□□ 1.1
AC008878.3-201ENST00000617428 AEBP1Q8IUX7 1158 aa21.93■■□□□ 1.1
AC008878.3-201ENST00000617428 K7ELQ4 463 aaPredicted RBP21.93■■□□□ 1.1
AC008878.3-201ENST00000617428 GPTP24298 496 aa21.93■■□□□ 1.1
AC008878.3-201ENST00000617428 KRT32Q14532 448 aa21.93■■□□□ 1.1
AC008878.3-201ENST00000617428 CUL7Q14999 1698 aa21.93■■□□□ 1.1
AC008878.3-201ENST00000617428 ABCC11Q96J66 1382 aa21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 A0A087WZG4 1122 aa21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 TTLL5Q6EMB2 1281 aa21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 ANKIB1Q9P2G1 1089 aa21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 MX1P20591 662 aa21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 WDR33Q9C0J8 1336 aaKnown RBP21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 ALDH1L2Q3SY69 923 aa21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 FILIP1LQ4L180 1135 aa21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 MNS1Q8NEH6 495 aa21.92■■□□□ 1.1
AC008878.3-201ENST00000617428 KRT85P78386 507 aa21.91■■□□□ 1.1
AC008878.3-201ENST00000617428 LRPPRCP42704 1394 aaKnown RBP21.91■■□□□ 1.1
AC008878.3-201ENST00000617428 FBLN1P23142 703 aa21.91■■□□□ 1.1
AC008878.3-201ENST00000617428 IFNL2Q8IZJ0 200 aa21.91■■□□□ 1.1
AC008878.3-201ENST00000617428 LETM1O95202 739 aaPredicted RBP21.91■■□□□ 1.1
AC008878.3-201ENST00000617428 MRE11P49959 708 aa21.91■■□□□ 1.1
AC008878.3-201ENST00000617428 IMMTQ16891 758 aaKnown RBP21.91■■□□□ 1.1
AC008878.3-201ENST00000617428 MAGEC2Q9UBF1 373 aaPredicted RBP21.91■■□□□ 1.1
AC008878.3-201ENST00000617428 CDKL5O76039 1030 aa21.9■■□□□ 1.1
AC008878.3-201ENST00000617428 HSP90AB3PQ58FF7 597 aa21.9■■□□□ 1.1
AC008878.3-201ENST00000617428 BCL11BQ9C0K0 894 aaPredicted RBP21.9■■□□□ 1.1
AC008878.3-201ENST00000617428 HYPKQ9NX55 129 aa21.9■■□□□ 1.1
AC008878.3-201ENST00000617428 MINDY4BA8MYZ0 360 aa21.89■■□□□ 1.1
AC008878.3-201ENST00000617428 CCDC8Q9H0W5 538 aaPredicted RBP21.89■■□□□ 1.1
AC008878.3-201ENST00000617428 TNRQ92752 1358 aa21.89■■□□□ 1.1
AC008878.3-201ENST00000617428 LRRFIP2Q9Y608 721 aaKnown RBP21.89■■□□□ 1.09
AC008878.3-201ENST00000617428 RAB11FIP3O75154 756 aa21.89■■□□□ 1.09
AC008878.3-201ENST00000617428 WWC2Q6AWC2 1192 aa21.89■■□□□ 1.09
AC008878.3-201ENST00000617428 NOL7Q9UMY1 257 aaKnown RBP21.89■■□□□ 1.09
AC008878.3-201ENST00000617428 SSBP05455 408 aaKnown RBP eCLIP21.88■■□□□ 1.09
AC008878.3-201ENST00000617428 FLIIQ13045 1269 aa21.88■■□□□ 1.09
AC008878.3-201ENST00000617428 ANKRD24Q8TF21 1146 aa21.88■■□□□ 1.09
AC008878.3-201ENST00000617428 USP5P45974 858 aa21.88■■□□□ 1.09
AC008878.3-201ENST00000617428 TTC21BQ7Z4L5 1316 aa21.88■■□□□ 1.09
AC008878.3-201ENST00000617428 ZNF219Q9P2Y4 722 aaPredicted RBP21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 C20orf194Q5TEA3 1177 aa21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 FAM43AQ8N2R8 423 aa21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 DDX11Q96FC9 970 aa21.87■■□□□ 1.09
AC008878.3-201ENST00000617428 ZSCAN31Q96LW9 406 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms