RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 SPATA31A3Q5VYP0 1347 aa15.64■□□□□ 0.09
TULP4-206ENST00000616856 TRIM27P14373 513 aa15.63■□□□□ 0.09
TULP4-206ENST00000616856 ZC3H6P61129 1189 aaKnown RBP15.63■□□□□ 0.09
TULP4-206ENST00000616856 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
TULP4-206ENST00000616856 NFE2L2Q16236 605 aa15.63■□□□□ 0.09
TULP4-206ENST00000616856 ZKSCAN2Q63HK3 967 aa15.63■□□□□ 0.09
TULP4-206ENST00000616856 ARHGEF25Q86VW2 580 aa15.63■□□□□ 0.09
TULP4-206ENST00000616856 THUMPD2Q9BTF0 503 aaKnown RBP15.63■□□□□ 0.09
TULP4-206ENST00000616856 IL16Q14005 1332 aa15.63■□□□□ 0.09
TULP4-206ENST00000616856 LTBP4Q8N2S1 1624 aa15.62■□□□□ 0.09
TULP4-206ENST00000616856 IGSF1Q8N6C5 1336 aa15.62■□□□□ 0.09
TULP4-206ENST00000616856 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
TULP4-206ENST00000616856 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
TULP4-206ENST00000616856 SEC24BO95487 1268 aa15.61■□□□□ 0.09
TULP4-206ENST00000616856 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
TULP4-206ENST00000616856 SOS2Q07890 1332 aaPredicted RBP15.6■□□□□ 0.09
TULP4-206ENST00000616856 PHRF1Q9P1Y6 1649 aaKnown RBP15.6■□□□□ 0.09
TULP4-206ENST00000616856 VIRMAQ69YN4 1812 aaKnown RBP15.6■□□□□ 0.09
TULP4-206ENST00000616856 NOB1Q9ULX3 412 aaKnown RBP15.6■□□□□ 0.09
TULP4-206ENST00000616856 DLG5Q8TDM6 1919 aa15.59■□□□□ 0.09
TULP4-206ENST00000616856 KDRP35968 1356 aa15.59■□□□□ 0.09
TULP4-206ENST00000616856 RWDD1Q9H446 243 aaPredicted RBP15.59■□□□□ 0.09
TULP4-206ENST00000616856 AXIN2Q9Y2T1 843 aa15.59■□□□□ 0.09
TULP4-206ENST00000616856 PDZRN3Q9UPQ7 1066 aa15.59■□□□□ 0.09
TULP4-206ENST00000616856 FAM83GA6ND36 823 aa15.58■□□□□ 0.08
TULP4-206ENST00000616856 ATF7IPQ6VMQ6 1270 aa15.58■□□□□ 0.08
TULP4-206ENST00000616856 LRRC59Q96AG4 307 aaKnown RBP15.58■□□□□ 0.08
TULP4-206ENST00000616856 NBPF6Q5VWK0 638 aa15.57■□□□□ 0.08
TULP4-206ENST00000616856 ITPRIPQ8IWB1 547 aa15.57■□□□□ 0.08
TULP4-206ENST00000616856 NBPF4Q96M43 638 aa15.57■□□□□ 0.08
TULP4-206ENST00000616856 ANKRD24Q8TF21 1146 aa15.57■□□□□ 0.08
TULP4-206ENST00000616856 NHSL1Q5SYE7 1610 aa15.57■□□□□ 0.08
TULP4-206ENST00000616856 RGPD2P0DJD1 1756 aa15.56■□□□□ 0.08
TULP4-206ENST00000616856 DCTN1Q14203 1278 aa15.56■□□□□ 0.08
TULP4-206ENST00000616856 TMEM57Q8N5G2 664 aa15.56■□□□□ 0.08
TULP4-206ENST00000616856 RGPD5Q99666 1765 aa15.56■□□□□ 0.08
TULP4-206ENST00000616856 CHRNA2Q15822 529 aa15.56■□□□□ 0.08
TULP4-206ENST00000616856 CRYBG1Q9Y4K1 1723 aa15.56■□□□□ 0.08
TULP4-206ENST00000616856 ROBO1Q9Y6N7 1651 aa15.55■□□□□ 0.08
TULP4-206ENST00000616856 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
TULP4-206ENST00000616856 MTHFSDQ2M296 383 aaKnown RBP15.55■□□□□ 0.08
TULP4-206ENST00000616856 TSPYL6Q8N831 410 aa15.55■□□□□ 0.08
TULP4-206ENST00000616856 KIAA0232Q92628 1395 aa15.55■□□□□ 0.08
TULP4-206ENST00000616856 HAP1P54257 671 aaPredicted RBP15.54■□□□□ 0.08
TULP4-206ENST00000616856 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
TULP4-206ENST00000616856 UBE2Q2Q8WVN8 375 aa15.53■□□□□ 0.08
TULP4-206ENST00000616856 ELL2O00472 640 aaPredicted RBP15.52■□□□□ 0.08
TULP4-206ENST00000616856 MCM10Q7L590 875 aa15.52■□□□□ 0.08
TULP4-206ENST00000616856 DDX19BQ9UMR2 479 aa15.52■□□□□ 0.08
TULP4-206ENST00000616856 ERBB3P21860 1342 aa15.52■□□□□ 0.08
TULP4-206ENST00000616856 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.07
TULP4-206ENST00000616856 KIF16BQ96L93 1317 aa15.51■□□□□ 0.07
TULP4-206ENST00000616856 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
TULP4-206ENST00000616856 GAS2L2Q8NHY3 880 aa15.51■□□□□ 0.07
TULP4-206ENST00000616856 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
TULP4-206ENST00000616856 MBIPQ9NS73 344 aa15.51■□□□□ 0.07
TULP4-206ENST00000616856 VAMP4O75379 141 aa15.5■□□□□ 0.07
TULP4-206ENST00000616856 ZBTB40Q9NUA8 1239 aa15.5■□□□□ 0.07
TULP4-206ENST00000616856 COL18A1P39060 1754 aa15.5■□□□□ 0.07
TULP4-206ENST00000616856 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
TULP4-206ENST00000616856 ALDH1L2Q3SY69 923 aa15.5■□□□□ 0.07
TULP4-206ENST00000616856 UPF2Q9HAU5 1272 aaKnown RBP15.5■□□□□ 0.07
TULP4-206ENST00000616856 PRDM11Q9NQV5 511 aa15.5■□□□□ 0.07
TULP4-206ENST00000616856 CPDO75976 1380 aa15.49■□□□□ 0.07
TULP4-206ENST00000616856 CSB-PGBD3P0DP91 1061 aa15.49■□□□□ 0.07
TULP4-206ENST00000616856 GNAI1P63096 354 aa15.49■□□□□ 0.07
TULP4-206ENST00000616856 PIP4K2BP78356 416 aa15.49■□□□□ 0.07
TULP4-206ENST00000616856 HDAC1Q13547 482 aaPredicted RBP15.49■□□□□ 0.07
TULP4-206ENST00000616856 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
TULP4-206ENST00000616856 ABCA3Q99758 1704 aa15.49■□□□□ 0.07
TULP4-206ENST00000616856 IFT57Q9NWB7 429 aa15.49■□□□□ 0.07
TULP4-206ENST00000616856 NLRP2Q9NX02 1062 aa15.49■□□□□ 0.07
TULP4-206ENST00000616856 C8orf58Q8NAV2 365 aa15.48■□□□□ 0.07
TULP4-206ENST00000616856 CFAP44Q96MT7 982 aa15.48■□□□□ 0.07
TULP4-206ENST00000616856 BECN1Q14457 450 aa15.47■□□□□ 0.07
TULP4-206ENST00000616856 MRPL50Q8N5N7 158 aaKnown RBP15.47■□□□□ 0.07
TULP4-206ENST00000616856 GNAT3A8MTJ3 354 aa15.46■□□□□ 0.07
TULP4-206ENST00000616856 BRPF1P55201 1214 aaPredicted RBP15.46■□□□□ 0.07
TULP4-206ENST00000616856 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.07
TULP4-206ENST00000616856 TOM1O60784 492 aa15.46■□□□□ 0.07
TULP4-206ENST00000616856 NFKBIBQ15653 356 aa15.46■□□□□ 0.07
TULP4-206ENST00000616856 CAMTA1Q9Y6Y1 1673 aa15.46■□□□□ 0.07
TULP4-206ENST00000616856 NCAPD2Q15021 1401 aa15.46■□□□□ 0.06
TULP4-206ENST00000616856 MAP3K5Q99683 1374 aa15.45■□□□□ 0.06
TULP4-206ENST00000616856 TWISTNBQ3B726 338 aaPredicted RBP15.45■□□□□ 0.06
TULP4-206ENST00000616856 SMC5Q8IY18 1101 aa15.45■□□□□ 0.06
TULP4-206ENST00000616856 CHMP4BQ9H444 224 aaKnown RBP15.45■□□□□ 0.06
TULP4-206ENST00000616856 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
TULP4-206ENST00000616856 ABCC6O95255 1503 aa15.45■□□□□ 0.06
TULP4-206ENST00000616856 KRT24Q2M2I5 525 aa15.44■□□□□ 0.06
TULP4-206ENST00000616856 MIS18AQ9NYP9 233 aa15.44■□□□□ 0.06
TULP4-206ENST00000616856 LMO7Q8WWI1 1683 aa15.44■□□□□ 0.06
TULP4-206ENST00000616856 CRB1P82279 1406 aa15.44■□□□□ 0.06
TULP4-206ENST00000616856 UBAP1LF5GYI3 381 aa15.43■□□□□ 0.06
TULP4-206ENST00000616856 PLEKHO1Q53GL0 409 aaPredicted RBP15.43■□□□□ 0.06
TULP4-206ENST00000616856 ZNF530Q6P9A1 599 aaPredicted RBP15.43■□□□□ 0.06
TULP4-206ENST00000616856 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
TULP4-206ENST00000616856 ZBTB7BO15156 539 aaPredicted RBP15.43■□□□□ 0.06
TULP4-206ENST00000616856 HTATSF1O43719 755 aaKnown RBP15.42■□□□□ 0.06
TULP4-206ENST00000616856 IL17REQ8NFR9 667 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 289.5 ms