RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 PLSCR1O15162 318 aa18.74■□□□□ 0.59
UPK1A-203ENST00000616789 RGPD3A6NKT7 1758 aaPredicted RBP18.74■□□□□ 0.59
UPK1A-203ENST00000616789 RGPD4Q7Z3J3 1758 aa18.74■□□□□ 0.59
UPK1A-203ENST00000616789 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
UPK1A-203ENST00000616789 PROM2Q8N271 834 aa18.73■□□□□ 0.59
UPK1A-203ENST00000616789 ZCRB1Q8TBF4 217 aaKnown RBP18.73■□□□□ 0.59
UPK1A-203ENST00000616789 PARD3Q8TEW0 1356 aa18.73■□□□□ 0.59
UPK1A-203ENST00000616789 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
UPK1A-203ENST00000616789 NUP188Q5SRE5 1749 aa18.71■□□□□ 0.59
UPK1A-203ENST00000616789 PKD1L3Q7Z443 1732 aa18.71■□□□□ 0.59
UPK1A-203ENST00000616789 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
UPK1A-203ENST00000616789 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
UPK1A-203ENST00000616789 RAPGEF4Q8WZA2 1011 aa18.69■□□□□ 0.58
UPK1A-203ENST00000616789 CYP27B1O15528 508 aa18.68■□□□□ 0.58
UPK1A-203ENST00000616789 ACSBG1Q96GR2 724 aa18.68■□□□□ 0.58
UPK1A-203ENST00000616789 BTAF1O14981 1849 aa18.68■□□□□ 0.58
UPK1A-203ENST00000616789 KAT6BQ8WYB5 2073 aa18.68■□□□□ 0.58
UPK1A-203ENST00000616789 TATP17735 454 aaPredicted RBP18.68■□□□□ 0.58
UPK1A-203ENST00000616789 IL13P35225 146 aa18.68■□□□□ 0.58
UPK1A-203ENST00000616789 MTHFSP49914 203 aa18.68■□□□□ 0.58
UPK1A-203ENST00000616789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.58
UPK1A-203ENST00000616789 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
UPK1A-203ENST00000616789 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
UPK1A-203ENST00000616789 KDRP35968 1356 aa18.63■□□□□ 0.57
UPK1A-203ENST00000616789 PLEKHG2Q9H7P9 1386 aa18.63■□□□□ 0.57
UPK1A-203ENST00000616789 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
UPK1A-203ENST00000616789 AEBP1Q8IUX7 1158 aa18.63■□□□□ 0.57
UPK1A-203ENST00000616789 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
UPK1A-203ENST00000616789 COL3A1P02461 1466 aaPredicted RBP18.63■□□□□ 0.57
UPK1A-203ENST00000616789 PCDH11XQ9BZA7 1347 aa18.62■□□□□ 0.57
UPK1A-203ENST00000616789 PCDH11YQ9BZA8 1340 aa18.62■□□□□ 0.57
UPK1A-203ENST00000616789 PSDA5PKW4 1024 aaPredicted RBP18.62■□□□□ 0.57
UPK1A-203ENST00000616789 TXNRD1Q16881 649 aa18.61■□□□□ 0.57
UPK1A-203ENST00000616789 R3HDM1Q15032 1099 aaKnown RBP18.6■□□□□ 0.57
UPK1A-203ENST00000616789 ANO8Q9HCE9 1232 aaPredicted RBP18.6■□□□□ 0.57
UPK1A-203ENST00000616789 ITGB4P16144 1822 aa18.6■□□□□ 0.57
UPK1A-203ENST00000616789 LRRC4BQ9NT99 713 aa18.59■□□□□ 0.57
UPK1A-203ENST00000616789 LY75O60449 1722 aa18.59■□□□□ 0.57
UPK1A-203ENST00000616789 PHKG2P15735 406 aa18.58■□□□□ 0.57
UPK1A-203ENST00000616789 SPG7Q9UQ90 795 aa18.58■□□□□ 0.57
UPK1A-203ENST00000616789 PAPPAQ13219 1627 aa18.58■□□□□ 0.57
UPK1A-203ENST00000616789 CNGB1Q14028 1251 aaPredicted RBP18.57■□□□□ 0.56
UPK1A-203ENST00000616789 SULT6B1Q6IMI4 303 aa18.57■□□□□ 0.56
UPK1A-203ENST00000616789 PPP2R1AP30153 589 aa18.55■□□□□ 0.56
UPK1A-203ENST00000616789 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
UPK1A-203ENST00000616789 IFNL2Q8IZJ0 200 aa18.55■□□□□ 0.56
UPK1A-203ENST00000616789 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
UPK1A-203ENST00000616789 NBPF14Q5TI25 921 aa18.54■□□□□ 0.56
UPK1A-203ENST00000616789 PIGBQ92521 554 aa18.53■□□□□ 0.56
UPK1A-203ENST00000616789 PDGFDQ9GZP0 370 aaPredicted RBP18.53■□□□□ 0.56
UPK1A-203ENST00000616789 AMOTQ4VCS5 1084 aa18.52■□□□□ 0.55
UPK1A-203ENST00000616789 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.55
UPK1A-203ENST00000616789 CASZ1Q86V15 1759 aa18.52■□□□□ 0.55
UPK1A-203ENST00000616789 LRP5O75197 1615 aa18.52■□□□□ 0.55
UPK1A-203ENST00000616789 KDM6AO15550 1401 aaPredicted RBP18.51■□□□□ 0.55
UPK1A-203ENST00000616789 HMOX1P09601 288 aa18.51■□□□□ 0.55
UPK1A-203ENST00000616789 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
UPK1A-203ENST00000616789 KCNQ4P56696 695 aa18.51■□□□□ 0.55
UPK1A-203ENST00000616789 SLC15A2Q16348 729 aa18.51■□□□□ 0.55
UPK1A-203ENST00000616789 SLC27A3Q5K4L6 730 aa18.51■□□□□ 0.55
UPK1A-203ENST00000616789 MPRIPQ6WCQ1 1025 aa18.51■□□□□ 0.55
UPK1A-203ENST00000616789 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
UPK1A-203ENST00000616789 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
UPK1A-203ENST00000616789 ZNF827Q17R98 1081 aa18.48■□□□□ 0.55
UPK1A-203ENST00000616789 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
UPK1A-203ENST00000616789 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
UPK1A-203ENST00000616789 ADAMTS7Q9UKP4 1686 aa18.46■□□□□ 0.55
UPK1A-203ENST00000616789 SCN11AQ9UI33 1791 aa18.46■□□□□ 0.55
UPK1A-203ENST00000616789 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
UPK1A-203ENST00000616789 ERVV-2B6SEH9 535 aa18.46■□□□□ 0.55
UPK1A-203ENST00000616789 MTHFSDQ2M296 383 aaKnown RBP18.45■□□□□ 0.54
UPK1A-203ENST00000616789 ASAP1Q9ULH1 1129 aa18.45■□□□□ 0.54
UPK1A-203ENST00000616789 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
UPK1A-203ENST00000616789 QSER1Q2KHR3 1735 aa18.45■□□□□ 0.54
UPK1A-203ENST00000616789 TUBGCP6Q96RT7 1819 aa18.45■□□□□ 0.54
UPK1A-203ENST00000616789 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
UPK1A-203ENST00000616789 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
UPK1A-203ENST00000616789 VIRMAQ69YN4 1812 aaKnown RBP18.44■□□□□ 0.54
UPK1A-203ENST00000616789 AKAP4Q5JQC9 854 aa18.43■□□□□ 0.54
UPK1A-203ENST00000616789 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
UPK1A-203ENST00000616789 STK32BQ9NY57 414 aa18.43■□□□□ 0.54
UPK1A-203ENST00000616789 TMOD3Q9NYL9 352 aa18.43■□□□□ 0.54
UPK1A-203ENST00000616789 CCNL1Q9UK58 526 aaPredicted RBP18.43■□□□□ 0.54
UPK1A-203ENST00000616789 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
UPK1A-203ENST00000616789 PHACTR3Q96KR7 559 aa18.42■□□□□ 0.54
UPK1A-203ENST00000616789 SLC4A9Q96Q91 983 aa18.42■□□□□ 0.54
UPK1A-203ENST00000616789 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
UPK1A-203ENST00000616789 C5P01031 1676 aa18.42■□□□□ 0.54
UPK1A-203ENST00000616789 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
UPK1A-203ENST00000616789 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
UPK1A-203ENST00000616789 C1orf141Q5JVX7 400 aa18.41■□□□□ 0.54
UPK1A-203ENST00000616789 PNPLA7Q6ZV29 1317 aa18.4■□□□□ 0.54
UPK1A-203ENST00000616789 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
UPK1A-203ENST00000616789 MRC1P22897 1456 aa18.4■□□□□ 0.54
UPK1A-203ENST00000616789 ZNF831Q5JPB2 1677 aa18.39■□□□□ 0.54
UPK1A-203ENST00000616789 COL24A1Q17RW2 1714 aa18.39■□□□□ 0.53
UPK1A-203ENST00000616789 LOC102724428A0A0B4J2F2 783 aa18.39■□□□□ 0.53
UPK1A-203ENST00000616789 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
UPK1A-203ENST00000616789 PTGER2P43116 358 aa18.39■□□□□ 0.53
UPK1A-203ENST00000616789 SIK1P57059 783 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms