RNA–Protein interactions for RNA: ENST00000616430.1

PCDHGB6-202, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB6, Length 4,601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-202ENST00000616430 NSD2O96028 1365 aa12.95□□□□□ -0.34
PCDHGB6-202ENST00000616430 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
PCDHGB6-202ENST00000616430 FYB1O15117 783 aa12.95□□□□□ -0.34
PCDHGB6-202ENST00000616430 IL16Q14005 1332 aa12.95□□□□□ -0.34
PCDHGB6-202ENST00000616430 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
PCDHGB6-202ENST00000616430 SYTL4Q96C24 671 aaPredicted RBP12.94□□□□□ -0.34
PCDHGB6-202ENST00000616430 MNS1Q8NEH6 495 aa12.94□□□□□ -0.34
PCDHGB6-202ENST00000616430 GNAT3A8MTJ3 354 aa12.94□□□□□ -0.34
PCDHGB6-202ENST00000616430 RRP9O43818 475 aaKnown RBP12.94□□□□□ -0.34
PCDHGB6-202ENST00000616430 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
PCDHGB6-202ENST00000616430 HOOK1Q9UJC3 728 aaKnown RBP12.94□□□□□ -0.34
PCDHGB6-202ENST00000616430 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
PCDHGB6-202ENST00000616430 SAFBQ15424 915 aaKnown RBP eCLIP12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 NOC3LQ8WTT2 800 aaKnown RBP12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 GDPD2Q9HCC8 539 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 TSHZ3Q63HK5 1081 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 MYL6BP14649 208 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 CHD1O14646 1710 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 SMC2O95347 1197 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
PCDHGB6-202ENST00000616430 ITSN2Q9NZM3 1697 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 STK38Q15208 465 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 LRRFIP2Q9Y608 721 aaKnown RBP12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 ARHGEF12Q9NZN5 1544 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 A0A0U1RQG5 324 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 WASLO00401 505 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 MARCH6O60337 910 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 ATP2B1P20020 1258 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 ZSCAN31Q96LW9 406 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 TTC22Q5TAA0 569 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 FANCAO15360 1455 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 PIK3C2GO75747 1445 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
PCDHGB6-202ENST00000616430 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 ME1P48163 572 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 PDILTQ8N807 584 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 POGZQ7Z3K3 1410 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 ERICH2A1L162 156 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 PRPF40BQ6NWY9 871 aaKnown RBP12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 RBM27Q9P2N5 1060 aaKnown RBP12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
PCDHGB6-202ENST00000616430 GPS2Q13227 327 aa12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 COL17A1Q9UMD9 1497 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 TAF7Q15545 349 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 ANKRD20A12PQ8NF67 263 aa12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 ARHGAP45Q92619 1136 aa12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 KDM5BQ9UGL1 1544 aa12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 SDSP20132 328 aa12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 CAMK4Q16566 473 aa12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
PCDHGB6-202ENST00000616430 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.35
PCDHGB6-202ENST00000616430 FLIIQ13045 1269 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 DDX11Q96FC9 970 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 MEIS3Q99687 375 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 IPO7O95373 1038 aaKnown RBP12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 C8orf58Q8NAV2 365 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 DNMT1P26358 1616 aaKnown RBP12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 ERCC6L2Q5T890 1561 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 ATF3P18847 181 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 VPS37DQ86XT2 251 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 C16orf71Q8IYS4 520 aaPredicted RBP12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
PCDHGB6-202ENST00000616430 PTPRCP08575 1304 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 FILIP1Q7Z7B0 1213 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 THEMISQ8N1K5 641 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 ZBTB40Q9NUA8 1239 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 PLCH2O75038 1416 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 DHX16O60231 1041 aaKnown RBP12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 PROSER2Q86WR7 435 aaPredicted RBP12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 SPG7Q9UQ90 795 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 KIAA0556O60303 1618 aa12.88□□□□□ -0.35
PCDHGB6-202ENST00000616430 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB6-202ENST00000616430 CCDC112Q8NEF3 446 aa12.87□□□□□ -0.35
PCDHGB6-202ENST00000616430 BOLA2Q9H3K6 86 aa12.87□□□□□ -0.35
PCDHGB6-202ENST00000616430 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
PCDHGB6-202ENST00000616430 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms