RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
PPP4R3B-206ENST00000616407 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
PPP4R3B-206ENST00000616407 ZBTB40Q9NUA8 1239 aa16.05■□□□□ 0.16
PPP4R3B-206ENST00000616407 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3B-206ENST00000616407 TOM1L2Q6ZVM7 507 aa16.04■□□□□ 0.16
PPP4R3B-206ENST00000616407 TBC1D2Q9BYX2 928 aa16.04■□□□□ 0.16
PPP4R3B-206ENST00000616407 NUCB1Q02818 461 aa16.04■□□□□ 0.16
PPP4R3B-206ENST00000616407 EYA1Q99502 592 aa16.04■□□□□ 0.16
PPP4R3B-206ENST00000616407 PRDM11Q9NQV5 511 aa16.04■□□□□ 0.16
PPP4R3B-206ENST00000616407 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
PPP4R3B-206ENST00000616407 MEIS3Q99687 375 aa16.04■□□□□ 0.16
PPP4R3B-206ENST00000616407 TRAK2O60296 914 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 MSNP26038 577 aaKnown RBP16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 CABP4P57796 275 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 NEUROD6Q96NK8 337 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 DDX54Q8TDD1 881 aaKnown RBP16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 METP08581 1390 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 K7ELQ4 463 aaPredicted RBP16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 AMOTQ4VCS5 1084 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 TBC1D32Q96NH3 1257 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 SIL1Q9H173 461 aa16.03■□□□□ 0.16
PPP4R3B-206ENST00000616407 BMP2KLQ5H9B9 411 aa16.02■□□□□ 0.16
PPP4R3B-206ENST00000616407 SEC24BO95487 1268 aa16.02■□□□□ 0.16
PPP4R3B-206ENST00000616407 LRRFIP2Q9Y608 721 aaKnown RBP16.02■□□□□ 0.16
PPP4R3B-206ENST00000616407 FLT4P35916 1363 aa16.02■□□□□ 0.15
PPP4R3B-206ENST00000616407 NUTM1Q86Y26 1132 aa16.01■□□□□ 0.15
PPP4R3B-206ENST00000616407 MAP3K4Q9Y6R4 1608 aa16.01■□□□□ 0.15
PPP4R3B-206ENST00000616407 E9PCH4 1651 aa16.01■□□□□ 0.15
PPP4R3B-206ENST00000616407 ANXA1P04083 346 aa16■□□□□ 0.15
PPP4R3B-206ENST00000616407 FSD1Q9BTV5 496 aa16■□□□□ 0.15
PPP4R3B-206ENST00000616407 RNF17Q9BXT8 1623 aaKnown RBP16■□□□□ 0.15
PPP4R3B-206ENST00000616407 SMC5Q8IY18 1101 aa16■□□□□ 0.15
PPP4R3B-206ENST00000616407 ABCA9Q8IUA7 1624 aa16■□□□□ 0.15
PPP4R3B-206ENST00000616407 TBC1D9Q6ZT07 1266 aa16■□□□□ 0.15
PPP4R3B-206ENST00000616407 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
PPP4R3B-206ENST00000616407 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
PPP4R3B-206ENST00000616407 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
PPP4R3B-206ENST00000616407 GTF2E1P29083 439 aaPredicted RBP15.99■□□□□ 0.15
PPP4R3B-206ENST00000616407 PLEKHF1Q96S99 279 aa15.99■□□□□ 0.15
PPP4R3B-206ENST00000616407 MX1P20591 662 aa15.99■□□□□ 0.15
PPP4R3B-206ENST00000616407 ERC1Q8IUD2 1116 aa15.99■□□□□ 0.15
PPP4R3B-206ENST00000616407 GNL2Q13823 731 aaKnown RBP15.98■□□□□ 0.15
PPP4R3B-206ENST00000616407 DNAAF4Q8WXU2 420 aa15.98■□□□□ 0.15
PPP4R3B-206ENST00000616407 ANKRD24Q8TF21 1146 aa15.98■□□□□ 0.15
PPP4R3B-206ENST00000616407 MADDQ8WXG6 1647 aa15.98■□□□□ 0.15
PPP4R3B-206ENST00000616407 PLEKHG3A1L390 1219 aa15.98■□□□□ 0.15
PPP4R3B-206ENST00000616407 SMC3Q9UQE7 1217 aa15.98■□□□□ 0.15
PPP4R3B-206ENST00000616407 ATP6V1DQ9Y5K8 247 aa15.98■□□□□ 0.15
PPP4R3B-206ENST00000616407 ZBTB7BO15156 539 aaPredicted RBP15.98■□□□□ 0.15
PPP4R3B-206ENST00000616407 MCM4P33991 863 aa15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 CSPP1Q1MSJ5 1256 aa15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 SIRT1Q96EB6 747 aa15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 LRRC59Q96AG4 307 aaKnown RBP15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 ARHGAP31Q2M1Z3 1444 aa15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 DBF4Q9UBU7 674 aaPredicted RBP15.97■□□□□ 0.15
PPP4R3B-206ENST00000616407 HTATSF1O43719 755 aaKnown RBP15.96■□□□□ 0.15
PPP4R3B-206ENST00000616407 HOXC9P31274 260 aa15.96■□□□□ 0.15
PPP4R3B-206ENST00000616407 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.15
PPP4R3B-206ENST00000616407 AACSQ86V21 672 aa15.96■□□□□ 0.15
PPP4R3B-206ENST00000616407 KIF1BPQ96EK5 621 aa15.96■□□□□ 0.15
PPP4R3B-206ENST00000616407 VPS37CA5D8V6 355 aaPredicted RBP15.96■□□□□ 0.14
PPP4R3B-206ENST00000616407 TSHZ3Q63HK5 1081 aa15.96■□□□□ 0.14
PPP4R3B-206ENST00000616407 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.14
PPP4R3B-206ENST00000616407 FAM184AQ8NB25 1140 aa15.95■□□□□ 0.14
PPP4R3B-206ENST00000616407 MCM2P49736 904 aa15.95■□□□□ 0.14
PPP4R3B-206ENST00000616407 DNAJC2Q99543 621 aaKnown RBP15.95■□□□□ 0.14
PPP4R3B-206ENST00000616407 TOMM22Q9NS69 142 aa15.95■□□□□ 0.14
PPP4R3B-206ENST00000616407 H3BQV1 296 aa15.95■□□□□ 0.14
PPP4R3B-206ENST00000616407 IFFO2Q5TF58 517 aa15.95■□□□□ 0.14
PPP4R3B-206ENST00000616407 CHRNA2Q15822 529 aa15.94■□□□□ 0.14
PPP4R3B-206ENST00000616407 TSPOAP1O95153 1857 aa15.94■□□□□ 0.14
PPP4R3B-206ENST00000616407 CWC27Q6UX04 472 aaKnown RBP15.94■□□□□ 0.14
PPP4R3B-206ENST00000616407 BRPF3Q9ULD4 1205 aa15.94■□□□□ 0.14
PPP4R3B-206ENST00000616407 CHL1O00533 1208 aa15.94■□□□□ 0.14
PPP4R3B-206ENST00000616407 DRC7Q8IY82 874 aa15.94■□□□□ 0.14
PPP4R3B-206ENST00000616407 PHF14O94880 888 aa15.94■□□□□ 0.14
PPP4R3B-206ENST00000616407 PTCD1O75127 700 aaKnown RBP15.93■□□□□ 0.14
PPP4R3B-206ENST00000616407 LRRFIP1Q32MZ4 808 aaKnown RBP15.93■□□□□ 0.14
PPP4R3B-206ENST00000616407 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
PPP4R3B-206ENST00000616407 G2E3Q7L622 706 aa15.93■□□□□ 0.14
PPP4R3B-206ENST00000616407 KIF3AQ9Y496 699 aa15.93■□□□□ 0.14
PPP4R3B-206ENST00000616407 PPP1R42Q7Z4L9 355 aa15.92■□□□□ 0.14
PPP4R3B-206ENST00000616407 CHPF2Q9P2E5 772 aa15.92■□□□□ 0.14
PPP4R3B-206ENST00000616407 RAB11FIP3O75154 756 aa15.92■□□□□ 0.14
PPP4R3B-206ENST00000616407 GCP02774 474 aa15.92■□□□□ 0.14
PPP4R3B-206ENST00000616407 CIZ1Q9ULV3 898 aaPredicted RBP15.92■□□□□ 0.14
PPP4R3B-206ENST00000616407 DCTPP1Q9H773 170 aa15.92■□□□□ 0.14
PPP4R3B-206ENST00000616407 PIK3R4Q99570 1358 aa15.92■□□□□ 0.14
PPP4R3B-206ENST00000616407 PRPF40AO75400 957 aaKnown RBP15.91■□□□□ 0.14
PPP4R3B-206ENST00000616407 LARP1Q6PKG0 1096 aaKnown RBP15.91■□□□□ 0.14
PPP4R3B-206ENST00000616407 UPF3BQ9BZI7 483 aaKnown RBP15.91■□□□□ 0.14
PPP4R3B-206ENST00000616407 CEP85Q6P2H3 762 aa15.91■□□□□ 0.14
PPP4R3B-206ENST00000616407 MAP3K2Q9Y2U5 619 aa15.91■□□□□ 0.14
PPP4R3B-206ENST00000616407 SDSP20132 328 aa15.91■□□□□ 0.14
PPP4R3B-206ENST00000616407 CWC22Q9HCG8 908 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms