RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-222ENST00000616271 PPP2R1AP30153 589 aa24.83■■□□□ 1.57
CADM1-222ENST00000616271 IL13P35225 146 aa24.83■■□□□ 1.57
CADM1-222ENST00000616271 NHSQ6T4R5 1651 aa24.82■■□□□ 1.56
CADM1-222ENST00000616271 KAT6BQ8WYB5 2073 aa24.81■■□□□ 1.56
CADM1-222ENST00000616271 DOT1LQ8TEK3 1739 aa24.81■■□□□ 1.56
CADM1-222ENST00000616271 ZCRB1Q8TBF4 217 aaKnown RBP24.8■■□□□ 1.56
CADM1-222ENST00000616271 DIAPH1O60610 1272 aaKnown RBP24.79■■□□□ 1.56
CADM1-222ENST00000616271 RALBP1Q15311 655 aa24.79■■□□□ 1.56
CADM1-222ENST00000616271 CFAP53Q96M91 514 aa24.79■■□□□ 1.56
CADM1-222ENST00000616271 KDRP35968 1356 aa24.79■■□□□ 1.56
CADM1-222ENST00000616271 SF3B2Q13435 895 aaKnown RBP24.77■■□□□ 1.56
CADM1-222ENST00000616271 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
CADM1-222ENST00000616271 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
CADM1-222ENST00000616271 PCDH11XQ9BZA7 1347 aa24.76■■□□□ 1.55
CADM1-222ENST00000616271 PCDH11YQ9BZA8 1340 aa24.76■■□□□ 1.55
CADM1-222ENST00000616271 TRIM37O94972 964 aa24.75■■□□□ 1.55
CADM1-222ENST00000616271 DDX54Q8TDD1 881 aaKnown RBP24.74■■□□□ 1.55
CADM1-222ENST00000616271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.74■■□□□ 1.553e-8■□□□□ 10.4
CADM1-222ENST00000616271 BTAF1O14981 1849 aa24.73■■□□□ 1.55
CADM1-222ENST00000616271 SULT6B1Q6IMI4 303 aa24.73■■□□□ 1.55
CADM1-222ENST00000616271 AEBP1Q8IUX7 1158 aa24.73■■□□□ 1.55
CADM1-222ENST00000616271 SPG7Q9UQ90 795 aa24.72■■□□□ 1.55
CADM1-222ENST00000616271 TOGARAM1Q9Y4F4 1720 aa24.72■■□□□ 1.55
CADM1-222ENST00000616271 ITGB4P16144 1822 aa24.71■■□□□ 1.55
CADM1-222ENST00000616271 VIRMAQ69YN4 1812 aaKnown RBP24.7■■□□□ 1.55
CADM1-222ENST00000616271 MYBBP1AQ9BQG0 1328 aaKnown RBP24.7■■□□□ 1.54
CADM1-222ENST00000616271 RREB1Q92766 1687 aa24.7■■□□□ 1.54
CADM1-222ENST00000616271 BAG6P46379 1132 aa24.7■■□□□ 1.54
CADM1-222ENST00000616271 BCL11BQ9C0K0 894 aaPredicted RBP24.69■■□□□ 1.54
CADM1-222ENST00000616271 CYP27B1O15528 508 aa24.68■■□□□ 1.54
CADM1-222ENST00000616271 PRKRIP1Q9H875 184 aaPredicted RBP24.68■■□□□ 1.54
CADM1-222ENST00000616271 NUDCQ9Y266 331 aa24.68■■□□□ 1.54
CADM1-222ENST00000616271 U2SURPO15042 1029 aaKnown RBP24.67■■□□□ 1.54
CADM1-222ENST00000616271 HMOX1P09601 288 aa24.66■■□□□ 1.54
CADM1-222ENST00000616271 AMOTQ4VCS5 1084 aa24.66■■□□□ 1.54
CADM1-222ENST00000616271 PLEKHO1Q53GL0 409 aaPredicted RBP24.66■■□□□ 1.54
CADM1-222ENST00000616271 DEFB132Q7Z7B7 95 aa24.66■■□□□ 1.54
CADM1-222ENST00000616271 APBA3O96018 575 aa24.65■■□□□ 1.54
CADM1-222ENST00000616271 ACSBG1Q96GR2 724 aa24.65■■□□□ 1.54
CADM1-222ENST00000616271 IFNL2Q8IZJ0 200 aa24.64■■□□□ 1.54
CADM1-222ENST00000616271 SCN11AQ9UI33 1791 aa24.64■■□□□ 1.53
CADM1-222ENST00000616271 NUP188Q5SRE5 1749 aa24.64■■□□□ 1.53
CADM1-222ENST00000616271 NKX1-1Q15270 411 aaPredicted RBP24.63■■□□□ 1.53
CADM1-222ENST00000616271 KCNQ2O43526 872 aa24.62■■□□□ 1.53
CADM1-222ENST00000616271 PHKG2P15735 406 aa24.62■■□□□ 1.53
CADM1-222ENST00000616271 PTF1AQ7RTS3 328 aa24.62■■□□□ 1.53
CADM1-222ENST00000616271 EN1Q05925 392 aaPredicted RBP24.61■■□□□ 1.53
CADM1-222ENST00000616271 ZNF530Q6P9A1 599 aaPredicted RBP24.6■■□□□ 1.53
CADM1-222ENST00000616271 LY75O60449 1722 aa24.6■■□□□ 1.53
CADM1-222ENST00000616271 U2AF1L5P0DN76 240 aaPredicted RBP24.59■■□□□ 1.53
CADM1-222ENST00000616271 U2AF1Q01081 240 aaKnown RBP eCLIP24.59■■□□□ 1.534e-7■■■□□ 17.4
CADM1-222ENST00000616271 PLSCR1O15162 318 aa24.58■■□□□ 1.53
CADM1-222ENST00000616271 HSP90AB1P08238 724 aaKnown RBP24.58■■□□□ 1.53
CADM1-222ENST00000616271 CAMKK2Q96RR4 588 aa24.58■■□□□ 1.53
CADM1-222ENST00000616271 RSPH6AQ9H0K4 717 aa24.58■■□□□ 1.53
CADM1-222ENST00000616271 ADAMTS7Q9UKP4 1686 aa24.58■■□□□ 1.53
CADM1-222ENST00000616271 PRIM1P49642 420 aaKnown RBP24.57■■□□□ 1.52
CADM1-222ENST00000616271 C1orf141Q5JVX7 400 aa24.57■■□□□ 1.52
CADM1-222ENST00000616271 EZH2Q15910 746 aaKnown RBP24.56■■□□□ 1.52
CADM1-222ENST00000616271 SYTL4Q96C24 671 aaPredicted RBP24.56■■□□□ 1.52
CADM1-222ENST00000616271 KDM6AO15550 1401 aaPredicted RBP24.55■■□□□ 1.52
CADM1-222ENST00000616271 FCHSD2O94868 740 aa24.55■■□□□ 1.52
CADM1-222ENST00000616271 PRKAR2BP31323 418 aa24.55■■□□□ 1.52
CADM1-222ENST00000616271 DCAF5Q96JK2 942 aa24.54■■□□□ 1.52
CADM1-222ENST00000616271 DLG5Q8TDM6 1919 aa24.53■■□□□ 1.52
CADM1-222ENST00000616271 ANP32CO43423 234 aa24.53■■□□□ 1.52
CADM1-222ENST00000616271 AKAP4Q5JQC9 854 aa24.53■■□□□ 1.52
CADM1-222ENST00000616271 MTHFSDQ2M296 383 aaKnown RBP24.52■■□□□ 1.52
CADM1-222ENST00000616271 GAS2L2Q8NHY3 880 aa24.51■■□□□ 1.51
CADM1-222ENST00000616271 MRC1P22897 1456 aa24.5■■□□□ 1.51
CADM1-222ENST00000616271 ERVV-2B6SEH9 535 aa24.49■■□□□ 1.51
CADM1-222ENST00000616271 SIPA1L3O60292 1781 aaPredicted RBP24.48■■□□□ 1.51
CADM1-222ENST00000616271 PAPPAQ13219 1627 aa24.48■■□□□ 1.51
CADM1-222ENST00000616271 MPRIPQ6WCQ1 1025 aa24.48■■□□□ 1.51
CADM1-222ENST00000616271 TMOD3Q9NYL9 352 aa24.48■■□□□ 1.51
CADM1-222ENST00000616271 TAF1LQ8IZX4 1826 aa24.47■■□□□ 1.51
CADM1-222ENST00000616271 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
CADM1-222ENST00000616271 PHACTR3Q96KR7 559 aa24.47■■□□□ 1.51
CADM1-222ENST00000616271 PNNQ9H307 717 aaKnown RBP24.47■■□□□ 1.51
CADM1-222ENST00000616271 TXNRD1Q16881 649 aa24.46■■□□□ 1.51
CADM1-222ENST00000616271 PIGBQ92521 554 aa24.46■■□□□ 1.51
CADM1-222ENST00000616271 NEFMP07197 916 aa24.45■■□□□ 1.5
CADM1-222ENST00000616271 PROM2Q8N271 834 aa24.45■■□□□ 1.5
CADM1-222ENST00000616271 C5P01031 1676 aa24.44■■□□□ 1.5
CADM1-222ENST00000616271 WDR43Q15061 677 aaKnown RBP eCLIP24.44■■□□□ 1.5
CADM1-222ENST00000616271 ZNF831Q5JPB2 1677 aa24.43■■□□□ 1.5
CADM1-222ENST00000616271 PALLDQ8WX93 1383 aa24.43■■□□□ 1.5
CADM1-222ENST00000616271 GNAT3A8MTJ3 354 aa24.43■■□□□ 1.5
CADM1-222ENST00000616271 RNMTO43148 476 aaKnown RBP24.43■■□□□ 1.5
CADM1-222ENST00000616271 CABP4P57796 275 aa24.43■■□□□ 1.5
CADM1-222ENST00000616271 SMARCC1Q92922 1105 aaPredicted RBP24.43■■□□□ 1.5
CADM1-222ENST00000616271 PLEKHF1Q96S99 279 aa24.43■■□□□ 1.5
CADM1-222ENST00000616271 SLC27A3Q5K4L6 730 aa24.42■■□□□ 1.5
CADM1-222ENST00000616271 QSER1Q2KHR3 1735 aa24.41■■□□□ 1.5
CADM1-222ENST00000616271 MAPK8IP3Q9UPT6 1336 aa24.4■■□□□ 1.5
CADM1-222ENST00000616271 LGR6Q9HBX8 967 aa24.4■■□□□ 1.5
CADM1-222ENST00000616271 NBPF14Q5TI25 921 aa24.39■■□□□ 1.49
CADM1-222ENST00000616271 UBR2Q8IWV8 1755 aa24.39■■□□□ 1.49
CADM1-222ENST00000616271 TUBGCP6Q96RT7 1819 aa24.38■■□□□ 1.49
CADM1-222ENST00000616271 SLC52A2Q9HAB3 445 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms