RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 TRHP20396 242 aaPredicted RBP8.05□□□□□ -1.12
LMO3-235ENST00000616247 GNAI1P63096 354 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 NECTIN2Q92692 538 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 ABCA8O94911 1581 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 ABCC10Q5T3U5 1492 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 SYNMO15061 1565 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 PDE4CQ08493 712 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 PLCD3Q8N3E9 789 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 DDX54Q8TDD1 881 aaKnown RBP8.05□□□□□ -1.12
LMO3-235ENST00000616247 GTPBP4Q9BZE4 634 aaKnown RBP8.05□□□□□ -1.12
LMO3-235ENST00000616247 MBIPQ9NS73 344 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 TERF2IPQ9NYB0 399 aa8.05□□□□□ -1.12
LMO3-235ENST00000616247 VIRMAQ69YN4 1812 aaKnown RBP8.04□□□□□ -1.12
LMO3-235ENST00000616247 GOLGA6L4A6NEF3 574 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 CAMK4Q16566 473 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.04□□□□□ -1.12
LMO3-235ENST00000616247 PYCARDQ9ULZ3 195 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 V9GYY5 206 aaPredicted RBP8.04□□□□□ -1.12
LMO3-235ENST00000616247 PTPRTO14522 1441 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 GOLGA6L6A8MZA4 724 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 HDGFL2Q7Z4V5 671 aaPredicted RBP8.04□□□□□ -1.12
LMO3-235ENST00000616247 PLEKHF1Q96S99 279 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 MEIS3Q99687 375 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 DCTPP1Q9H773 170 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
LMO3-235ENST00000616247 LETM1O95202 739 aaPredicted RBP8.03□□□□□ -1.12
LMO3-235ENST00000616247 UTP14CQ5TAP6 766 aaKnown RBP8.03□□□□□ -1.12
LMO3-235ENST00000616247 F6X3S4 739 aa8.03□□□□□ -1.12
LMO3-235ENST00000616247 HMMRO75330 724 aa8.03□□□□□ -1.12
LMO3-235ENST00000616247 NAA30Q147X3 362 aaPredicted RBP8.03□□□□□ -1.12
LMO3-235ENST00000616247 CCDC183Q5T5S1 534 aa8.03□□□□□ -1.12
LMO3-235ENST00000616247 FAM184AQ8NB25 1140 aa8.03□□□□□ -1.12
LMO3-235ENST00000616247 WDR33Q9C0J8 1336 aaKnown RBP8.03□□□□□ -1.12
LMO3-235ENST00000616247 FYB1O15117 783 aa8.03□□□□□ -1.12
LMO3-235ENST00000616247 KCNJ4P48050 445 aa8.03□□□□□ -1.12
LMO3-235ENST00000616247 MIS18AQ9NYP9 233 aa8.03□□□□□ -1.12
LMO3-235ENST00000616247 SMC3Q9UQE7 1217 aa8.03□□□□□ -1.12
LMO3-235ENST00000616247 BRD1O95696 1058 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 PTGS1P23219 599 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 FERMT3Q86UX7 667 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 TRIM5Q9C035 493 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 CROCC2H7BZ55 1655 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 NOS1P29475 1434 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 CD109Q6YHK3 1445 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 CDC42BPAQ5VT25 1732 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 KDM4AO75164 1064 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 KIF20AO95235 890 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 NFE2L2Q16236 605 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 TPD52L1Q16890 204 aaPredicted RBP8.02□□□□□ -1.13
LMO3-235ENST00000616247 CKAP2LQ8IYA6 745 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 IL1RAPL2Q9NP60 686 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 IL16Q14005 1332 aa8.02□□□□□ -1.13
LMO3-235ENST00000616247 ZNF518AQ6AHZ1 1483 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 FCHSD2O94868 740 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 FBXW7Q969H0 707 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 SRCIN1Q9C0H9 1055 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 CABP1Q9NZU7 370 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 MCM2P49736 904 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 CCDC186Q7Z3E2 898 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 TNNT1P13805 278 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 CPA1P15085 419 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 LRMPQ12912 555 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 ANKRD44Q8N8A2 993 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 CCDC112Q8NEF3 446 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 STAG3Q9UJ98 1225 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 EMILIN1Q9Y6C2 1016 aa8.01□□□□□ -1.13
LMO3-235ENST00000616247 MX1P20591 662 aa8□□□□□ -1.13
LMO3-235ENST00000616247 PDE1AP54750 535 aa8□□□□□ -1.13
LMO3-235ENST00000616247 FKBP5Q13451 457 aaPredicted RBP8□□□□□ -1.13
LMO3-235ENST00000616247 CEP85Q6P2H3 762 aa8□□□□□ -1.13
LMO3-235ENST00000616247 RTF1Q92541 710 aaKnown RBP8□□□□□ -1.13
LMO3-235ENST00000616247 UVSSAQ2YD98 709 aa8□□□□□ -1.13
LMO3-235ENST00000616247 RPAP2Q8IXW5 612 aaPredicted RBP8□□□□□ -1.13
LMO3-235ENST00000616247 TRAPPC8Q9Y2L5 1435 aa8□□□□□ -1.13
LMO3-235ENST00000616247 PLXNC1O60486 1568 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 DNM1Q05193 864 aaKnown RBP7.99□□□□□ -1.13
LMO3-235ENST00000616247 RRS1Q15050 365 aaKnown RBP7.99□□□□□ -1.13
LMO3-235ENST00000616247 LUZP1Q86V48 1076 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 CCDC83Q8IWF9 413 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 ARHGAP45Q92619 1136 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 PRAM1Q96QH2 718 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 ESYT1Q9BSJ8 1104 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 TAOK2Q9UL54 1235 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 KDM5AP29375 1690 aaKnown RBP7.99□□□□□ -1.13
LMO3-235ENST00000616247 SAMD9LQ8IVG5 1584 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 CCDC192P0DO97 292 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 FAM173BQ6P4H8 233 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 MCM10Q7L590 875 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 NUTM1Q86Y26 1132 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 ZNF428Q96B54 188 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 CHMP4AQ9BY43 222 aa7.99□□□□□ -1.13
LMO3-235ENST00000616247 TRMT1Q9NXH9 659 aaKnown RBP7.99□□□□□ -1.13
LMO3-235ENST00000616247 C14orf93Q9H972 538 aaKnown RBP7.99□□□□□ -1.13
LMO3-235ENST00000616247 OS9Q13438 667 aaPredicted RBP7.98□□□□□ -1.13
LMO3-235ENST00000616247 KIAA1524Q8TCG1 905 aa7.98□□□□□ -1.13
LMO3-235ENST00000616247 TFIP11Q9UBB9 837 aaKnown RBP7.98□□□□□ -1.13
LMO3-235ENST00000616247 NAP1L2Q9ULW6 460 aaPredicted RBP7.98□□□□□ -1.13
LMO3-235ENST00000616247 ATP6V1DQ9Y5K8 247 aa7.98□□□□□ -1.13
LMO3-235ENST00000616247 UGGT1Q9NYU2 1555 aa7.98□□□□□ -1.13
LMO3-235ENST00000616247 IQSEC2Q5JU85 1478 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms