RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 NFXL1Q6ZNB6 911 aa10.61□□□□□ -0.71
PCDH15-229ENST00000616114 MBD5Q9P267 1494 aa10.61□□□□□ -0.71
PCDH15-229ENST00000616114 CCDC192P0DO97 292 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 KRT85P78386 507 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 WASHC4Q2M389 1173 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 TSR1Q2NL82 804 aaKnown RBP10.6□□□□□ -0.71
PCDH15-229ENST00000616114 RNF214Q8ND24 703 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 TTC21AQ8NDW8 1320 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 AMOTL1Q8IY63 956 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 SNX21Q969T3 373 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 PDRG1Q9NUG6 133 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 DCTN1Q14203 1278 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 TBC1D9Q6ZT07 1266 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 TTC22Q5TAA0 569 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 MRPL50Q8N5N7 158 aaKnown RBP10.6□□□□□ -0.71
PCDH15-229ENST00000616114 ANKRD20A12PQ8NF67 263 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 KDM5DQ9BY66 1539 aa10.6□□□□□ -0.71
PCDH15-229ENST00000616114 KDM2BQ8NHM5 1336 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 ESPNB1AK53 854 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 AACSQ86V21 672 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 EXOC6BQ9Y2D4 811 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 BLOC1S2Q6QNY1 142 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 TBC1D2BQ9UPU7 963 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 FIBPO43427 364 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
PCDH15-229ENST00000616114 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
PCDH15-229ENST00000616114 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
PCDH15-229ENST00000616114 DNAJC2Q99543 621 aaKnown RBP10.59□□□□□ -0.71
PCDH15-229ENST00000616114 R3HCC1Q9Y3T6 440 aaKnown RBP10.59□□□□□ -0.71
PCDH15-229ENST00000616114 CCDC47Q96A33 483 aaKnown RBP10.59□□□□□ -0.71
PCDH15-229ENST00000616114 KIF6Q6ZMV9 814 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 ARID3AQ99856 593 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 UHRF1BP1LA0JNW5 1464 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 FAM13BQ9NYF5 915 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 MYO5CQ9NQX4 1742 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 NOL10Q9BSC4 688 aaKnown RBP10.58□□□□□ -0.72
PCDH15-229ENST00000616114 SH2B1Q9NRF2 756 aaPredicted RBP10.58□□□□□ -0.72
PCDH15-229ENST00000616114 PPIP5K1Q6PFW1 1433 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 ABCC1P33527 1531 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 KDM5AP29375 1690 aaKnown RBP10.58□□□□□ -0.72
PCDH15-229ENST00000616114 CABP4P57796 275 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
PCDH15-229ENST00000616114 SDF4Q9BRK5 362 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 IL1RAPL2Q9NP60 686 aa10.58□□□□□ -0.72
PCDH15-229ENST00000616114 PLXNC1O60486 1568 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 TNRQ92752 1358 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 SBNO2Q9Y2G9 1366 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 SMC5Q8IY18 1101 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 AMOTL2Q9Y2J4 779 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 FLIIQ13045 1269 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCDH15-229ENST00000616114 SMARCA5O60264 1052 aaPredicted RBP10.57□□□□□ -0.72
PCDH15-229ENST00000616114 XBP1P17861 261 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 JAKMIP1Q96N16 626 aaKnown RBP10.57□□□□□ -0.72
PCDH15-229ENST00000616114 SART3Q15020 963 aaKnown RBP10.57□□□□□ -0.72
PCDH15-229ENST00000616114 LARP1Q6PKG0 1096 aaKnown RBP10.57□□□□□ -0.72
PCDH15-229ENST00000616114 ANKRD44Q8N8A2 993 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 PIK3R4Q99570 1358 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 CWC27Q6UX04 472 aaKnown RBP10.57□□□□□ -0.72
PCDH15-229ENST00000616114 TRIM5Q9C035 493 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 MIS18AQ9NYP9 233 aa10.57□□□□□ -0.72
PCDH15-229ENST00000616114 A0A1W2PP64 1363 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 GPS2Q13227 327 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 ZSCAN25Q6NSZ9 544 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 ZSCAN30Q86W11 494 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 DNAAF4Q8WXU2 420 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 ZNF592Q92610 1267 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 POLKQ9UBT6 870 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 ZMYM3Q14202 1370 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 CCP110O43303 1012 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 CTNNA3Q9UI47 895 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 CFAP45Q9UL16 551 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.56□□□□□ -0.72
PCDH15-229ENST00000616114 ACEP12821 1306 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 NUTM1Q86Y26 1132 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 JMYQ8N9B5 988 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
PCDH15-229ENST00000616114 TTC39AQ5SRH9 613 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 BRMS1Q9HCU9 246 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 SOS1Q07889 1333 aaPredicted RBP10.55□□□□□ -0.72
PCDH15-229ENST00000616114 YTHDC2Q9H6S0 1430 aaKnown RBP10.55□□□□□ -0.72
PCDH15-229ENST00000616114 VPS37DQ86XT2 251 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 TNMDQ9H2S6 317 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 PHF8Q9UPP1 1060 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 MAP4K4O95819 1239 aaPredicted RBP10.55□□□□□ -0.72
PCDH15-229ENST00000616114 HOMER1Q86YM7 354 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 DBF4Q9UBU7 674 aaPredicted RBP10.55□□□□□ -0.72
PCDH15-229ENST00000616114 NPATQ14207 1427 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 SYNMO15061 1565 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 SAMD9LQ8IVG5 1584 aa10.55□□□□□ -0.72
PCDH15-229ENST00000616114 LRRFIP2Q9Y608 721 aaKnown RBP10.55□□□□□ -0.72
PCDH15-229ENST00000616114 PTPRTO14522 1441 aa10.54□□□□□ -0.72
PCDH15-229ENST00000616114 SSFA2P28290 1259 aa10.54□□□□□ -0.72
PCDH15-229ENST00000616114 VAMP4O75379 141 aa10.54□□□□□ -0.72
PCDH15-229ENST00000616114 RLBP1P12271 317 aa10.54□□□□□ -0.72
PCDH15-229ENST00000616114 CREBRFQ8IUR6 639 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms