RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ADGBQ8N7X0 1667 aa11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 AMER1Q5JTC6 1135 aaPredicted RBP11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 TSHZ2Q9NRE2 1034 aa11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 MCTP1Q6DN14 999 aa11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 TESK2Q96S53 571 aa11.41□□□□□ -0.58
CLTCL1-208ENST00000615606 SART3Q15020 963 aaKnown RBP11.4□□□□□ -0.58
CLTCL1-208ENST00000615606 ZSCAN25Q6NSZ9 544 aa11.4□□□□□ -0.58
CLTCL1-208ENST00000615606 IL16Q14005 1332 aa11.4□□□□□ -0.58
CLTCL1-208ENST00000615606 PHF14O94880 888 aa11.4□□□□□ -0.58
CLTCL1-208ENST00000615606 C8orf37Q96NL8 207 aa11.4□□□□□ -0.59
CLTCL1-208ENST00000615606 FOXD4L5Q5VV16 416 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 FOXD4L4Q8WXT5 416 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 C22orf23Q9BZE7 217 aa11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 TCEAL9Q9UHQ7 104 aa11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 NKTRP30414 1462 aaKnown RBP11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 GCP02774 474 aa11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 MYD88Q99836 296 aa11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 DDX11L8A8MPP1 907 aa11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 CHAF1AQ13111 956 aaPredicted RBP11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 TMEM57Q8N5G2 664 aa11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 ZFYVE9O95405 1425 aa11.39□□□□□ -0.59
CLTCL1-208ENST00000615606 RARSP54136 660 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 DNAAF4Q8WXU2 420 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 SNRPA1P09661 255 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 AACSQ86V21 672 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 AK7Q96M32 723 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 SAMD9LQ8IVG5 1584 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 A0A087WZG4 1122 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 SAFBQ15424 915 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 NACAP1Q9BZK3 213 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 CWC22Q9HCG8 908 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 DDB1Q16531 1140 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 POLKQ9UBT6 870 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 SMC3Q9UQE7 1217 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 PTPRCP08575 1304 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 TTC37Q6PGP7 1564 aa11.38□□□□□ -0.59
CLTCL1-208ENST00000615606 IL2RBP14784 551 aa11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 AKAP4Q5JQC9 854 aa11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 CABLES1Q8TDN4 633 aa11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 SMARCC1Q92922 1105 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 FBLN1P23142 703 aa11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 GZF1Q9H116 711 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 SIRT1Q96EB6 747 aa11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 AKAP2Q9Y2D5 859 aa11.37□□□□□ -0.59
CLTCL1-208ENST00000615606 TRMT112Q9UI30 125 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 KDM5DQ9BY66 1539 aa11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 POLR3AO14802 1390 aaPredicted RBP11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 KIAA2012Q0VF49 1180 aa11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 METTL24Q5JXM2 366 aa11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 PREX2Q70Z35 1606 aa11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 RAB11FIP3O75154 756 aa11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 FLIIQ13045 1269 aa11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 CHD1LQ86WJ1 897 aa11.36□□□□□ -0.59
CLTCL1-208ENST00000615606 XBP1P17861 261 aa11.35□□□□□ -0.59
CLTCL1-208ENST00000615606 IP6K1Q92551 441 aa11.35□□□□□ -0.59
CLTCL1-208ENST00000615606 KIF1BPQ96EK5 621 aa11.35□□□□□ -0.59
CLTCL1-208ENST00000615606 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
CLTCL1-208ENST00000615606 HECW2Q9P2P5 1572 aa11.35□□□□□ -0.59
CLTCL1-208ENST00000615606 MSNP26038 577 aaKnown RBP11.35□□□□□ -0.59
CLTCL1-208ENST00000615606 MBIPQ9NS73 344 aa11.35□□□□□ -0.59
CLTCL1-208ENST00000615606 PIK3R4Q99570 1358 aa11.35□□□□□ -0.59
CLTCL1-208ENST00000615606 EDC4Q6P2E9 1401 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 IFIT1P09914 478 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 FKBP4Q02790 459 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 IFIT5Q13325 482 aaKnown RBP11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 BRMS1Q9HCU9 246 aa11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 ERCC6L2Q5T890 1561 aa11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 FAM83GA6ND36 823 aa11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 GCC2Q8IWJ2 1684 aa11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 PARD3Q8TEW0 1356 aa11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 LTKP29376 864 aa11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 CDCA7Q9BWT1 371 aaPredicted RBP11.34□□□□□ -0.59
CLTCL1-208ENST00000615606 TSPOAP1O95153 1857 aa11.33□□□□□ -0.59
CLTCL1-208ENST00000615606 COL17A1Q9UMD9 1497 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 ARHGEF10O15013 1369 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 CCDC47Q96A33 483 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 ZBTB3Q9H5J0 574 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 VPS37CA5D8V6 355 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 HOXC9P31274 260 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 IKQ13123 557 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 ORAI2Q96SN7 254 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 EFCAB6Q5THR3 1501 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 MCM2P49736 904 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 NUCB2P80303 420 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 SKOR2Q2VWA4 1001 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 PIK3C2GO75747 1445 aa11.33□□□□□ -0.6
CLTCL1-208ENST00000615606 CAVIN4Q5BKX8 364 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms