RNA–Protein interactions for RNA: ENST00000614832.4

EPHB6-208, Transcript of EPH receptor B6, human

TSL 1 (best)

Gene EPHB6, Length 3,861 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPHB6-208	ENST00000614832	GAS2L3	Q86XJ1	694 aa		13.83	□□□□□ -0.2
EPHB6-208	ENST00000614832	LARP6	Q9BRS8	491 aa	Known RBP	13.83	□□□□□ -0.2
EPHB6-208	ENST00000614832	A2ML1	A8K2U0	1454 aa		13.83	□□□□□ -0.2
EPHB6-208	ENST00000614832	KIF16B	Q96L93	1317 aa		13.82	□□□□□ -0.2
EPHB6-208	ENST00000614832	TERF2IP	Q9NYB0	399 aa		13.82	□□□□□ -0.2
EPHB6-208	ENST00000614832	RBM25	P49756	843 aa	Known RBP	13.82	□□□□□ -0.2
EPHB6-208	ENST00000614832	CFAP44	Q96MT7	982 aa		13.82	□□□□□ -0.2
EPHB6-208	ENST00000614832	UPF3B	Q9BZI7	483 aa	Known RBP	13.82	□□□□□ -0.2
EPHB6-208	ENST00000614832	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.82	□□□□□ -0.2
EPHB6-208	ENST00000614832	PUS7	Q96PZ0	661 aa	Known RBP	13.82	□□□□□ -0.2
EPHB6-208	ENST00000614832	FAM83G	A6ND36	823 aa		13.81	□□□□□ -0.2
EPHB6-208	ENST00000614832	HMMR	O75330	724 aa		13.81	□□□□□ -0.2
EPHB6-208	ENST00000614832	FOSB	P53539	338 aa		13.81	□□□□□ -0.2
EPHB6-208	ENST00000614832	TXNDC2	Q86VQ3	553 aa		13.81	□□□□□ -0.2
EPHB6-208	ENST00000614832	NKTR	P30414	1462 aa	Known RBP	13.81	□□□□□ -0.2
EPHB6-208	ENST00000614832	USP25	Q9UHP3	1055 aa		13.81	□□□□□ -0.2
EPHB6-208	ENST00000614832	PRIM1	P49642	420 aa	Known RBP	13.81	□□□□□ -0.2
EPHB6-208	ENST00000614832	CCDC9	Q9Y3X0	531 aa	Known RBP	13.81	□□□□□ -0.2
EPHB6-208	ENST00000614832	SMARCA5	O60264	1052 aa	Predicted RBP	13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	RTF1	Q92541	710 aa	Known RBP	13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	KIF3A	Q9Y496	699 aa		13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	RABEP1	Q15276	862 aa		13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	NGEF	Q8N5V2	710 aa		13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	GAS2L2	Q8NHY3	880 aa		13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	RIMS2	Q9UQ26	1411 aa		13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	OFD1	O75665	1012 aa		13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	CCAR2	Q8N163	923 aa	Known RBP	13.8	□□□□□ -0.2
EPHB6-208	ENST00000614832	TMPO	P42166	694 aa	Known RBP	13.79	□□□□□ -0.2
EPHB6-208	ENST00000614832	HAP1	P54257	671 aa	Predicted RBP	13.79	□□□□□ -0.2
EPHB6-208	ENST00000614832	SASS6	Q6UVJ0	657 aa		13.79	□□□□□ -0.2
EPHB6-208	ENST00000614832	EMILIN1	Q9Y6C2	1016 aa		13.79	□□□□□ -0.2
EPHB6-208	ENST00000614832	DHX37	Q8IY37	1157 aa	Known RBP	13.79	□□□□□ -0.2
EPHB6-208	ENST00000614832	ZNF526	Q8TF50	670 aa	Predicted RBP	13.79	□□□□□ -0.2
EPHB6-208	ENST00000614832	ALK	Q9UM73	1620 aa		13.79	□□□□□ -0.2
EPHB6-208	ENST00000614832	INSR	P06213	1382 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	DYNC1I1	O14576	645 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	HMGN5	P82970	282 aa	Known RBP	13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	TBC1D9	Q6ZT07	1266 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	CHAMP1	Q96JM3	812 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	TNR	Q92752	1358 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	NRDC	O43847	1150 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	ZSCAN23	Q3MJ62	389 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	DTNB	O60941	627 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	HSP90B1	P14625	803 aa	Known RBP	13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	KRT24	Q2M2I5	525 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	CDK19	Q9BWU1	502 aa		13.78	□□□□□ -0.2
EPHB6-208	ENST00000614832	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.77	□□□□□ -0.2
EPHB6-208	ENST00000614832	RBM33	Q96EV2	1170 aa	Known RBP	13.77	□□□□□ -0.21
EPHB6-208	ENST00000614832	ZFP91	Q96JP5	570 aa	Predicted RBP	13.77	□□□□□ -0.21
EPHB6-208	ENST00000614832	BECN2	A8MW95	431 aa		13.77	□□□□□ -0.21
EPHB6-208	ENST00000614832	MAP4K4	O95819	1239 aa	Predicted RBP	13.77	□□□□□ -0.21
EPHB6-208	ENST00000614832	GPATCH11	Q8N954	259 aa		13.77	□□□□□ -0.21
EPHB6-208	ENST00000614832	CCDC94	Q9BW85	323 aa	Predicted RBP	13.77	□□□□□ -0.21
EPHB6-208	ENST00000614832	STK31	Q9BXU1	1019 aa		13.77	□□□□□ -0.21
EPHB6-208	ENST00000614832	TTC12	Q9H892	705 aa	Predicted RBP	13.77	□□□□□ -0.21
EPHB6-208	ENST00000614832	MBD3	O95983	291 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	TNNT1	P13805	278 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	DDX54	Q8TDD1	881 aa	Known RBP	13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	TAF3	Q5VWG9	929 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	TRIM5	Q9C035	493 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	DIAPH3	Q9NSV4	1193 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	SMC3	Q9UQE7	1217 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	GOLGA6L19	H0YKK7	550 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	ZBTB22	O15209	634 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	HDGF	P51858	240 aa	Known RBP	13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	WDR63	Q8IWG1	891 aa		13.76	□□□□□ -0.21
EPHB6-208	ENST00000614832	TULP4	Q9NRJ4	1543 aa		13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	BICD2	Q8TD16	824 aa		13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	IPO4	Q8TEX9	1081 aa	Known RBP	13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	LETM1	O95202	739 aa	Predicted RBP	13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	TSHZ3	Q63HK5	1081 aa		13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	TRIM34	Q9BYJ4	488 aa		13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	PTPRM	P28827	1452 aa		13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	SKIDA1	Q1XH10	827 aa		13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	KLHL40	Q2TBA0	621 aa		13.75	□□□□□ -0.21
EPHB6-208	ENST00000614832	NME9	Q86XW9	330 aa		13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	TSPYL6	Q8N831	410 aa		13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	ATAD2	Q6PL18	1390 aa		13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	ERBB4	Q15303	1308 aa		13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	GNL2	Q13823	731 aa	Known RBP	13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	TPD52L1	Q16890	204 aa	Predicted RBP	13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	ZGPAT	Q8N5A5	531 aa	Known RBP	13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	ZBTB9	Q96C00	473 aa		13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	GORAB	Q5T7V8	394 aa		13.74	□□□□□ -0.21
EPHB6-208	ENST00000614832	API5	Q9BZZ5	524 aa	Known RBP	13.73	□□□□□ -0.21
EPHB6-208	ENST00000614832	RBSN	Q9H1K0	784 aa		13.73	□□□□□ -0.21
EPHB6-208	ENST00000614832	CEBPZ	Q03701	1054 aa	Known RBP	13.73	□□□□□ -0.21
EPHB6-208	ENST00000614832	TWISTNB	Q3B726	338 aa	Predicted RBP	13.73	□□□□□ -0.21
EPHB6-208	ENST00000614832	PHACTR3	Q96KR7	559 aa		13.73	□□□□□ -0.21
EPHB6-208	ENST00000614832	DLC1	Q96QB1	1528 aa		13.72	□□□□□ -0.21
EPHB6-208	ENST00000614832	MCM10	Q7L590	875 aa		13.72	□□□□□ -0.21
EPHB6-208	ENST00000614832	GCC1	Q96CN9	775 aa		13.72	□□□□□ -0.21
EPHB6-208	ENST00000614832	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.72	□□□□□ -0.21
EPHB6-208	ENST00000614832	NINL	Q9Y2I6	1382 aa		13.72	□□□□□ -0.21
EPHB6-208	ENST00000614832	CAMK4	Q16566	473 aa		13.72	□□□□□ -0.21
EPHB6-208	ENST00000614832	FERMT3	Q86UX7	667 aa		13.72	□□□□□ -0.21
EPHB6-208	ENST00000614832	BLM	P54132	1417 aa	Predicted RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms