RNA–Protein interactions for RNA: ENST00000614800.4

SNX9-203, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-203ENST00000614800 ALS2Q96Q42 1657 aa8.55□□□□□ -1.04
SNX9-203ENST00000614800 COL14A1Q05707 1796 aaKnown RBP8.54□□□□□ -1.04
SNX9-203ENST00000614800 RTF1Q92541 710 aaKnown RBP8.54□□□□□ -1.04
SNX9-203ENST00000614800 CCDC136Q96JN2 1154 aa8.54□□□□□ -1.04
SNX9-203ENST00000614800 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
SNX9-203ENST00000614800 EYA1Q99502 592 aa8.54□□□□□ -1.04
SNX9-203ENST00000614800 SPINK5Q9NQ38 1064 aaPredicted RBP8.54□□□□□ -1.04
SNX9-203ENST00000614800 PEAK1Q9H792 1746 aa8.54□□□□□ -1.04
SNX9-203ENST00000614800 USP19O94966 1318 aa8.54□□□□□ -1.04
SNX9-203ENST00000614800 IGSF1Q8N6C5 1336 aa8.54□□□□□ -1.04
SNX9-203ENST00000614800 HTATSF1O43719 755 aaKnown RBP8.53□□□□□ -1.04
SNX9-203ENST00000614800 ARHGEF25Q86VW2 580 aa8.53□□□□□ -1.04
SNX9-203ENST00000614800 ZNF428Q96B54 188 aa8.53□□□□□ -1.04
SNX9-203ENST00000614800 LTV1Q96GA3 475 aaPredicted RBP8.53□□□□□ -1.04
SNX9-203ENST00000614800 IFT57Q9NWB7 429 aa8.53□□□□□ -1.04
SNX9-203ENST00000614800 LAS1LQ9Y4W2 734 aaKnown RBP8.53□□□□□ -1.04
SNX9-203ENST00000614800 NUP188Q5SRE5 1749 aa8.53□□□□□ -1.04
SNX9-203ENST00000614800 PHRF1Q9P1Y6 1649 aaKnown RBP8.53□□□□□ -1.04
SNX9-203ENST00000614800 SLIT3O75094 1523 aa8.53□□□□□ -1.04
SNX9-203ENST00000614800 TNS3Q68CZ2 1445 aa8.53□□□□□ -1.04
SNX9-203ENST00000614800 FANCIQ9NVI1 1328 aa8.53□□□□□ -1.04
SNX9-203ENST00000614800 KDRP35968 1356 aa8.52□□□□□ -1.05
SNX9-203ENST00000614800 CCDC125Q86Z20 511 aa8.52□□□□□ -1.05
SNX9-203ENST00000614800 AEBP1Q8IUX7 1158 aa8.52□□□□□ -1.05
SNX9-203ENST00000614800 NFAT5O94916 1531 aa8.52□□□□□ -1.05
SNX9-203ENST00000614800 SPATA31A3Q5VYP0 1347 aa8.52□□□□□ -1.05
SNX9-203ENST00000614800 RGPD3A6NKT7 1758 aaPredicted RBP8.51□□□□□ -1.05
SNX9-203ENST00000614800 RGPD4Q7Z3J3 1758 aa8.51□□□□□ -1.05
SNX9-203ENST00000614800 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
SNX9-203ENST00000614800 RARSP54136 660 aaKnown RBP8.51□□□□□ -1.05
SNX9-203ENST00000614800 EXOSC9Q06265 439 aaKnown RBP8.51□□□□□ -1.05
SNX9-203ENST00000614800 AAMPQ13685 434 aa8.51□□□□□ -1.05
SNX9-203ENST00000614800 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
SNX9-203ENST00000614800 CFAP44Q96MT7 982 aa8.51□□□□□ -1.05
SNX9-203ENST00000614800 GNAT3A8MTJ3 354 aa8.5□□□□□ -1.05
SNX9-203ENST00000614800 IPO8O15397 1037 aaKnown RBP8.5□□□□□ -1.05
SNX9-203ENST00000614800 PLIN1O60240 522 aa8.5□□□□□ -1.05
SNX9-203ENST00000614800 ALDH1L2Q3SY69 923 aa8.5□□□□□ -1.05
SNX9-203ENST00000614800 AMOTQ4VCS5 1084 aa8.5□□□□□ -1.05
SNX9-203ENST00000614800 PLEKHO1Q53GL0 409 aaPredicted RBP8.5□□□□□ -1.05
SNX9-203ENST00000614800 ANKRD24Q8TF21 1146 aa8.5□□□□□ -1.05
SNX9-203ENST00000614800 TSR2Q969E8 191 aaKnown RBP8.5□□□□□ -1.05
SNX9-203ENST00000614800 LTN1O94822 1766 aa8.5□□□□□ -1.05
SNX9-203ENST00000614800 DISP2A7MBM2 1401 aa8.49□□□□□ -1.05
SNX9-203ENST00000614800 BCAR3O75815 825 aa8.49□□□□□ -1.05
SNX9-203ENST00000614800 ZC3H6P61129 1189 aaKnown RBP8.49□□□□□ -1.05
SNX9-203ENST00000614800 MTHFSDQ2M296 383 aaKnown RBP8.49□□□□□ -1.05
SNX9-203ENST00000614800 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
SNX9-203ENST00000614800 FRAT1Q92837 279 aaPredicted RBP8.49□□□□□ -1.05
SNX9-203ENST00000614800 CHMP4AQ9BY43 222 aa8.49□□□□□ -1.05
SNX9-203ENST00000614800 SMC4Q9NTJ3 1288 aa8.49□□□□□ -1.05
SNX9-203ENST00000614800 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
SNX9-203ENST00000614800 KIF16BQ96L93 1317 aa8.49□□□□□ -1.05
SNX9-203ENST00000614800 ZNF853P0CG23 659 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 CSB-PGBD3P0DP91 1061 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 NBPF6Q5VWK0 638 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 ZKSCAN2Q63HK3 967 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 B4GALNT3Q6L9W6 998 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 GJD4Q96KN9 370 aaPredicted RBP8.48□□□□□ -1.05
SNX9-203ENST00000614800 NBPF4Q96M43 638 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 CRBNQ96SW2 442 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 BABAM1Q9NWV8 329 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 ABCC6O95255 1503 aa8.48□□□□□ -1.05
SNX9-203ENST00000614800 C1orf141Q5JVX7 400 aa8.47□□□□□ -1.05
SNX9-203ENST00000614800 PPP4R3CPQ6ZMV5 832 aa8.47□□□□□ -1.05
SNX9-203ENST00000614800 FTSJ3Q8IY81 847 aaKnown RBP8.47□□□□□ -1.05
SNX9-203ENST00000614800 RAPGEF4Q8WZA2 1011 aa8.47□□□□□ -1.05
SNX9-203ENST00000614800 CHMP4BQ9H444 224 aaKnown RBP8.47□□□□□ -1.05
SNX9-203ENST00000614800 MBIPQ9NS73 344 aa8.47□□□□□ -1.05
SNX9-203ENST00000614800 CPDO75976 1380 aa8.47□□□□□ -1.05
SNX9-203ENST00000614800 MAP3K5Q99683 1374 aa8.47□□□□□ -1.05
SNX9-203ENST00000614800 FAM83GA6ND36 823 aa8.46□□□□□ -1.06
SNX9-203ENST00000614800 CHL1O00533 1208 aa8.46□□□□□ -1.06
SNX9-203ENST00000614800 DCTN1Q14203 1278 aa8.46□□□□□ -1.06
SNX9-203ENST00000614800 TWISTNBQ3B726 338 aaPredicted RBP8.46□□□□□ -1.06
SNX9-203ENST00000614800 MCM10Q7L590 875 aa8.46□□□□□ -1.06
SNX9-203ENST00000614800 USHBP1Q8N6Y0 703 aa8.46□□□□□ -1.06
SNX9-203ENST00000614800 THUMPD2Q9BTF0 503 aaKnown RBP8.46□□□□□ -1.06
SNX9-203ENST00000614800 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.06
SNX9-203ENST00000614800 PLEKHG2Q9H7P9 1386 aa8.46□□□□□ -1.06
SNX9-203ENST00000614800 TATP17735 454 aaPredicted RBP8.45□□□□□ -1.06
SNX9-203ENST00000614800 BRPF1P55201 1214 aaPredicted RBP8.45□□□□□ -1.06
SNX9-203ENST00000614800 TAF7Q15545 349 aaPredicted RBP8.45□□□□□ -1.06
SNX9-203ENST00000614800 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
SNX9-203ENST00000614800 ZNF530Q6P9A1 599 aaPredicted RBP8.45□□□□□ -1.06
SNX9-203ENST00000614800 UNC5CLQ8IV45 518 aa8.45□□□□□ -1.06
SNX9-203ENST00000614800 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
SNX9-203ENST00000614800 CABLES1Q8TDN4 633 aa8.45□□□□□ -1.06
SNX9-203ENST00000614800 PRDM11Q9NQV5 511 aa8.45□□□□□ -1.06
SNX9-203ENST00000614800 TSPYL4Q9UJ04 414 aa8.45□□□□□ -1.06
SNX9-203ENST00000614800 SPG7Q9UQ90 795 aa8.45□□□□□ -1.06
SNX9-203ENST00000614800 ERBB3P21860 1342 aa8.45□□□□□ -1.06
SNX9-203ENST00000614800 SOS1Q07889 1333 aaPredicted RBP8.45□□□□□ -1.06
SNX9-203ENST00000614800 PARP4Q9UKK3 1724 aaKnown RBP8.45□□□□□ -1.06
SNX9-203ENST00000614800 KIAA0232Q92628 1395 aa8.45□□□□□ -1.06
SNX9-203ENST00000614800 VAMP4O75379 141 aa8.44□□□□□ -1.06
SNX9-203ENST00000614800 TEFQ10587 303 aa8.44□□□□□ -1.06
SNX9-203ENST00000614800 C20orf194Q5TEA3 1177 aa8.44□□□□□ -1.06
SNX9-203ENST00000614800 ATF7IPQ6VMQ6 1270 aa8.44□□□□□ -1.06
SNX9-203ENST00000614800 SSH1Q8WYL5 1049 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms