RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
PSMB3-208ENST00000613870 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
PSMB3-208ENST00000613870 NLRP2Q9NX02 1062 aa11.13□□□□□ -0.63
PSMB3-208ENST00000613870 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
PSMB3-208ENST00000613870 PSDA5PKW4 1024 aaPredicted RBP11.12□□□□□ -0.63
PSMB3-208ENST00000613870 EXOC5O00471 708 aa11.12□□□□□ -0.63
PSMB3-208ENST00000613870 PTF1AQ7RTS3 328 aa11.12□□□□□ -0.63
PSMB3-208ENST00000613870 CCDC146Q8IYE0 955 aa11.12□□□□□ -0.63
PSMB3-208ENST00000613870 LTV1Q96GA3 475 aaPredicted RBP11.12□□□□□ -0.63
PSMB3-208ENST00000613870 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
PSMB3-208ENST00000613870 RREB1Q92766 1687 aa11.11□□□□□ -0.63
PSMB3-208ENST00000613870 RGPD2P0DJD1 1756 aa11.11□□□□□ -0.63
PSMB3-208ENST00000613870 NEFMP07197 916 aa11.11□□□□□ -0.63
PSMB3-208ENST00000613870 HOXC9P31274 260 aa11.11□□□□□ -0.63
PSMB3-208ENST00000613870 BCL9O00512 1426 aa11.1□□□□□ -0.63
PSMB3-208ENST00000613870 IL2RBP14784 551 aa11.1□□□□□ -0.63
PSMB3-208ENST00000613870 HSP90AB2PQ58FF8 381 aa11.1□□□□□ -0.63
PSMB3-208ENST00000613870 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
PSMB3-208ENST00000613870 TNS2Q63HR2 1409 aa11.09□□□□□ -0.63
PSMB3-208ENST00000613870 NUP188Q5SRE5 1749 aa11.09□□□□□ -0.63
PSMB3-208ENST00000613870 FLT4P35916 1363 aa11.09□□□□□ -0.63
PSMB3-208ENST00000613870 R3HDM1Q15032 1099 aaKnown RBP11.09□□□□□ -0.63
PSMB3-208ENST00000613870 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
PSMB3-208ENST00000613870 MAPK8IP3Q9UPT6 1336 aa11.09□□□□□ -0.63
PSMB3-208ENST00000613870 FAM208AQ9UK61 1670 aaKnown RBP11.08□□□□□ -0.64
PSMB3-208ENST00000613870 MAP2P11137 1827 aaKnown RBP11.08□□□□□ -0.64
PSMB3-208ENST00000613870 PLSCR1O15162 318 aa11.08□□□□□ -0.64
PSMB3-208ENST00000613870 HMOX1P09601 288 aa11.08□□□□□ -0.64
PSMB3-208ENST00000613870 EIF4A2Q14240 407 aaKnown RBP11.08□□□□□ -0.64
PSMB3-208ENST00000613870 KAT6BQ8WYB5 2073 aa11.08□□□□□ -0.64
PSMB3-208ENST00000613870 SMG6Q86US8 1419 aaKnown RBP11.08□□□□□ -0.64
PSMB3-208ENST00000613870 KCNQ2O43526 872 aa11.07□□□□□ -0.64
PSMB3-208ENST00000613870 IL13P35225 146 aa11.07□□□□□ -0.64
PSMB3-208ENST00000613870 PROM2Q8N271 834 aa11.07□□□□□ -0.64
PSMB3-208ENST00000613870 RUNDC1Q96C34 613 aa11.07□□□□□ -0.64
PSMB3-208ENST00000613870 RGPD3A6NKT7 1758 aaPredicted RBP11.07□□□□□ -0.64
PSMB3-208ENST00000613870 RGPD4Q7Z3J3 1758 aa11.07□□□□□ -0.64
PSMB3-208ENST00000613870 RTL1A6NKG5 1358 aa11.06□□□□□ -0.64
PSMB3-208ENST00000613870 INSRP06213 1382 aa11.06□□□□□ -0.64
PSMB3-208ENST00000613870 APAF1O14727 1248 aa11.06□□□□□ -0.64
PSMB3-208ENST00000613870 ACSBG1Q96GR2 724 aa11.06□□□□□ -0.64
PSMB3-208ENST00000613870 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
PSMB3-208ENST00000613870 KIF24Q5T7B8 1368 aa11.05□□□□□ -0.64
PSMB3-208ENST00000613870 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
PSMB3-208ENST00000613870 NBPF6Q5VWK0 638 aa11.05□□□□□ -0.64
PSMB3-208ENST00000613870 SULT6B1Q6IMI4 303 aa11.05□□□□□ -0.64
PSMB3-208ENST00000613870 NBPF4Q96M43 638 aa11.05□□□□□ -0.64
PSMB3-208ENST00000613870 LRP5O75197 1615 aa11.05□□□□□ -0.64
PSMB3-208ENST00000613870 NHSQ6T4R5 1651 aa11.04□□□□□ -0.64
PSMB3-208ENST00000613870 FCHSD2O94868 740 aa11.04□□□□□ -0.64
PSMB3-208ENST00000613870 PRKAR2BP31323 418 aa11.04□□□□□ -0.64
PSMB3-208ENST00000613870 NBPF14Q5TI25 921 aa11.04□□□□□ -0.64
PSMB3-208ENST00000613870 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
PSMB3-208ENST00000613870 ZBED9Q6R2W3 1325 aa11.04□□□□□ -0.64
PSMB3-208ENST00000613870 SHANK3Q9BYB0 1731 aa11.04□□□□□ -0.64
PSMB3-208ENST00000613870 USHBP1Q8N6Y0 703 aa11.03□□□□□ -0.64
PSMB3-208ENST00000613870 DDX54Q8TDD1 881 aaKnown RBP11.03□□□□□ -0.64
PSMB3-208ENST00000613870 MEGF6O75095 1541 aa11.03□□□□□ -0.64
PSMB3-208ENST00000613870 BTAF1O14981 1849 aa11.02□□□□□ -0.64
PSMB3-208ENST00000613870 TXNRD1Q16881 649 aa11.02□□□□□ -0.65
PSMB3-208ENST00000613870 EYA1Q99502 592 aa11.02□□□□□ -0.65
PSMB3-208ENST00000613870 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
PSMB3-208ENST00000613870 AEBP1Q8IUX7 1158 aa11.01□□□□□ -0.65
PSMB3-208ENST00000613870 ZCRB1Q8TBF4 217 aaKnown RBP11.01□□□□□ -0.65
PSMB3-208ENST00000613870 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
PSMB3-208ENST00000613870 RIPK4P57078 832 aa10.99□□□□□ -0.65
PSMB3-208ENST00000613870 NGEFQ8N5V2 710 aa10.99□□□□□ -0.65
PSMB3-208ENST00000613870 PLEKHF1Q96S99 279 aa10.99□□□□□ -0.65
PSMB3-208ENST00000613870 DOT1LQ8TEK3 1739 aa10.98□□□□□ -0.65
PSMB3-208ENST00000613870 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
PSMB3-208ENST00000613870 TMPOP42166 694 aaKnown RBP10.98□□□□□ -0.65
PSMB3-208ENST00000613870 NFE2L2Q16236 605 aa10.98□□□□□ -0.65
PSMB3-208ENST00000613870 RAPGEF4Q8WZA2 1011 aa10.98□□□□□ -0.65
PSMB3-208ENST00000613870 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
PSMB3-208ENST00000613870 PDGFDQ9GZP0 370 aaPredicted RBP10.98□□□□□ -0.65
PSMB3-208ENST00000613870 IGSF1Q8N6C5 1336 aa10.98□□□□□ -0.65
PSMB3-208ENST00000613870 CASZ1Q86V15 1759 aa10.98□□□□□ -0.65
PSMB3-208ENST00000613870 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
PSMB3-208ENST00000613870 SLC15A2Q16348 729 aa10.97□□□□□ -0.65
PSMB3-208ENST00000613870 LRRC4BQ9NT99 713 aa10.97□□□□□ -0.65
PSMB3-208ENST00000613870 NCAPD2Q15021 1401 aa10.97□□□□□ -0.65
PSMB3-208ENST00000613870 PAPPAQ13219 1627 aa10.96□□□□□ -0.65
PSMB3-208ENST00000613870 GOLGA2Q08379 1002 aa10.96□□□□□ -0.65
PSMB3-208ENST00000613870 LMOD3Q0VAK6 560 aa10.96□□□□□ -0.65
PSMB3-208ENST00000613870 SYTL4Q96C24 671 aaPredicted RBP10.96□□□□□ -0.65
PSMB3-208ENST00000613870 STK32BQ9NY57 414 aa10.96□□□□□ -0.65
PSMB3-208ENST00000613870 PKD1L3Q7Z443 1732 aa10.95□□□□□ -0.66
PSMB3-208ENST00000613870 CYP27B1O15528 508 aa10.95□□□□□ -0.66
PSMB3-208ENST00000613870 WWC1Q8IX03 1113 aa10.95□□□□□ -0.66
PSMB3-208ENST00000613870 GAS2L2Q8NHY3 880 aa10.95□□□□□ -0.66
PSMB3-208ENST00000613870 RTF1Q92541 710 aaKnown RBP10.95□□□□□ -0.66
PSMB3-208ENST00000613870 LAS1LQ9Y4W2 734 aaKnown RBP10.95□□□□□ -0.66
PSMB3-208ENST00000613870 LY75O60449 1722 aa10.95□□□□□ -0.66
PSMB3-208ENST00000613870 PCDH11XQ9BZA7 1347 aa10.94□□□□□ -0.66
PSMB3-208ENST00000613870 PCDH11YQ9BZA8 1340 aa10.94□□□□□ -0.66
PSMB3-208ENST00000613870 PLEKHO1Q53GL0 409 aaPredicted RBP10.94□□□□□ -0.66
PSMB3-208ENST00000613870 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
PSMB3-208ENST00000613870 SPON1Q9HCB6 807 aa10.94□□□□□ -0.66
PSMB3-208ENST00000613870 ITGB4P16144 1822 aa10.93□□□□□ -0.66
PSMB3-208ENST00000613870 TOGARAM1Q9Y4F4 1720 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms