RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 KIF13AQ9H1H9 1805 aa8.55□□□□□ -1.04
CDKAL1-204ENST00000613575 CLGNO14967 610 aa8.55□□□□□ -1.04
CDKAL1-204ENST00000613575 RRP1P56182 461 aaKnown RBP8.55□□□□□ -1.04
CDKAL1-204ENST00000613575 ADAMTS8Q9UP79 889 aa8.55□□□□□ -1.04
CDKAL1-204ENST00000613575 PIK3C2GO75747 1445 aa8.55□□□□□ -1.04
CDKAL1-204ENST00000613575 POGZQ7Z3K3 1410 aa8.55□□□□□ -1.04
CDKAL1-204ENST00000613575 IQGAP1P46940 1657 aa8.55□□□□□ -1.04
CDKAL1-204ENST00000613575 SPHKAPQ2M3C7 1700 aa8.55□□□□□ -1.04
CDKAL1-204ENST00000613575 EFCAB6Q5THR3 1501 aa8.54□□□□□ -1.04
CDKAL1-204ENST00000613575 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
CDKAL1-204ENST00000613575 NGEFQ8N5V2 710 aa8.54□□□□□ -1.04
CDKAL1-204ENST00000613575 ZNF521Q96K83 1311 aa8.54□□□□□ -1.04
CDKAL1-204ENST00000613575 KIDINS220Q9ULH0 1771 aa8.54□□□□□ -1.04
CDKAL1-204ENST00000613575 CEP152O94986 1710 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 NEO1Q92859 1461 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 PTMSP20962 102 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 MAP2K5Q13163 448 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 PROX2Q3B8N5 592 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 UTP14CQ5TAP6 766 aaKnown RBP8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 NPATQ14207 1427 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 MINK1Q8N4C8 1332 aaPredicted RBP8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 CLSTN1O94985 981 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 WWC1Q8IX03 1113 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 TRMT2AQ8IZ69 625 aaKnown RBP8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 CARD14Q9BXL6 1004 aa8.53□□□□□ -1.04
CDKAL1-204ENST00000613575 ASXL1Q8IXJ9 1541 aa8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 NOS1P29475 1434 aa8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 ARHGAP31Q2M1Z3 1444 aa8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 TRIM6-TRIM34B2RNG4 842 aa8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 TNNT2P45379 298 aaPredicted RBP8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 ZBED2Q9BTP6 218 aa8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 PLA2G2EQ9NZK7 142 aa8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 RBM27Q9P2N5 1060 aaKnown RBP8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 MAP3K4Q9Y6R4 1608 aa8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 SYNMO15061 1565 aa8.52□□□□□ -1.05
CDKAL1-204ENST00000613575 IRX3P78415 501 aaPredicted RBP8.51□□□□□ -1.05
CDKAL1-204ENST00000613575 TMEM132AQ24JP5 1023 aa8.51□□□□□ -1.05
CDKAL1-204ENST00000613575 AXDND1Q5T1B0 1012 aaPredicted RBP8.51□□□□□ -1.05
CDKAL1-204ENST00000613575 PACS2Q86VP3 889 aa8.51□□□□□ -1.05
CDKAL1-204ENST00000613575 TSKSQ9UJT2 592 aa8.51□□□□□ -1.05
CDKAL1-204ENST00000613575 ERVK-7P63135 1459 aa8.51□□□□□ -1.05
CDKAL1-204ENST00000613575 FRMPD1Q5SYB0 1578 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 SETBP1Q9Y6X0 1596 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 IRF6O14896 467 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 FAM161AQ3B820 660 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 TAF3Q5VWG9 929 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 GGT6Q6P531 493 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 ANKRD13DQ6ZTN6 518 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 RGS22Q8NE09 1264 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 AK7Q96M32 723 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 SLC52A1Q9NWF4 448 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
CDKAL1-204ENST00000613575 CLCN1P35523 988 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 LSM11P83369 360 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 DUSP27Q5VZP5 1158 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 CCDC102AQ96A19 550 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 KIAA1468Q9P260 1216 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 ZFYVE9O95405 1425 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 CFAP74Q9C0B2 1584 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 MCCP23508 829 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 SLFN5Q08AF3 891 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 WDR43Q15061 677 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.052e-9■□□□□ 9
CDKAL1-204ENST00000613575 TMEM51Q9NW97 253 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 UGGT1Q9NYU2 1555 aa8.49□□□□□ -1.05
CDKAL1-204ENST00000613575 POLR3AO14802 1390 aaPredicted RBP8.48□□□□□ -1.05
CDKAL1-204ENST00000613575 PPRC1Q5VV67 1664 aaKnown RBP8.48□□□□□ -1.05
CDKAL1-204ENST00000613575 RAPGEF3O95398 923 aa8.48□□□□□ -1.05
CDKAL1-204ENST00000613575 TTC13Q8NBP0 860 aa8.48□□□□□ -1.05
CDKAL1-204ENST00000613575 PNMA3Q9UL41 463 aa8.48□□□□□ -1.05
CDKAL1-204ENST00000613575 VPS9D1Q9Y2B5 631 aa8.48□□□□□ -1.05
CDKAL1-204ENST00000613575 ABCC3O15438 1527 aa8.48□□□□□ -1.05
CDKAL1-204ENST00000613575 ADGRB1O14514 1584 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 NBPF26B4DH59 902 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 TCERG1O14776 1098 aaKnown RBP8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 ONECUT3O60422 494 aaPredicted RBP8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 OATP04181 439 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 FAM193AP78312 1265 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 NUDT18Q6ZVK8 323 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 SLC4A5Q9BY07 1137 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 ADGRG1Q9Y653 693 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 PLEKHH1Q9ULM0 1364 aa8.47□□□□□ -1.05
CDKAL1-204ENST00000613575 MS4A1P11836 297 aa8.46□□□□□ -1.05
CDKAL1-204ENST00000613575 MMP14P50281 582 aa8.46□□□□□ -1.05
CDKAL1-204ENST00000613575 IDI1Q13907 227 aa8.46□□□□□ -1.05
CDKAL1-204ENST00000613575 RBM46Q8TBY0 533 aaKnown RBP8.46□□□□□ -1.05
CDKAL1-204ENST00000613575 FRAT1Q92837 279 aaPredicted RBP8.46□□□□□ -1.05
CDKAL1-204ENST00000613575 PLCD4Q9BRC7 762 aa8.46□□□□□ -1.05
CDKAL1-204ENST00000613575 MYO3AQ8NEV4 1616 aa8.46□□□□□ -1.05
CDKAL1-204ENST00000613575 ABCA6Q8N139 1617 aa8.46□□□□□ -1.06
CDKAL1-204ENST00000613575 SMAPO00193 183 aa8.46□□□□□ -1.06
CDKAL1-204ENST00000613575 L1TD1Q5T7N2 865 aaKnown RBP8.46□□□□□ -1.06
CDKAL1-204ENST00000613575 MTERF4Q7Z6M4 381 aaKnown RBP8.46□□□□□ -1.06
CDKAL1-204ENST00000613575 TATDN2Q93075 761 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms