RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 CARD10Q9BWT7 1032 aa26.46■■□□□ 1.83
CPNE9-205ENST00000613455 CRB1P82279 1406 aa26.46■■□□□ 1.83
CPNE9-205ENST00000613455 SPATA31A6Q5VVP1 1343 aa26.46■■□□□ 1.83
CPNE9-205ENST00000613455 LRRC37A3O60309 1634 aa26.46■■□□□ 1.83
CPNE9-205ENST00000613455 DCTN1Q14203 1278 aa26.45■■□□□ 1.83
CPNE9-205ENST00000613455 PKD1L3Q7Z443 1732 aa26.45■■□□□ 1.83
CPNE9-205ENST00000613455 PARP4Q9UKK3 1724 aaKnown RBP26.45■■□□□ 1.83
CPNE9-205ENST00000613455 SLIT2O94813 1529 aa26.44■■□□□ 1.82
CPNE9-205ENST00000613455 MAP3K5Q99683 1374 aa26.44■■□□□ 1.82
CPNE9-205ENST00000613455 AMOTQ4VCS5 1084 aa26.44■■□□□ 1.82
CPNE9-205ENST00000613455 RAPGEF4Q8WZA2 1011 aa26.44■■□□□ 1.82
CPNE9-205ENST00000613455 PLEKHO1Q53GL0 409 aaPredicted RBP26.43■■□□□ 1.82
CPNE9-205ENST00000613455 MCM10Q7L590 875 aa26.42■■□□□ 1.82
CPNE9-205ENST00000613455 OVOS2A0A0G2JMS6 1433 aa26.42■■□□□ 1.82
CPNE9-205ENST00000613455 GNAT3A8MTJ3 354 aa26.41■■□□□ 1.82
CPNE9-205ENST00000613455 HTATSF1O43719 755 aaKnown RBP26.41■■□□□ 1.82
CPNE9-205ENST00000613455 TATP17735 454 aaPredicted RBP26.41■■□□□ 1.82
CPNE9-205ENST00000613455 CALD1Q05682 793 aaKnown RBP26.41■■□□□ 1.82
CPNE9-205ENST00000613455 MYH16Q9H6N6 1097 aa26.41■■□□□ 1.82
CPNE9-205ENST00000613455 ZNF530Q6P9A1 599 aaPredicted RBP26.4■■□□□ 1.82
CPNE9-205ENST00000613455 FANCIQ9NVI1 1328 aa26.4■■□□□ 1.82
CPNE9-205ENST00000613455 VIRMAQ69YN4 1812 aaKnown RBP26.4■■□□□ 1.82
CPNE9-205ENST00000613455 RTF1Q92541 710 aaKnown RBP26.39■■□□□ 1.81
CPNE9-205ENST00000613455 TSR2Q969E8 191 aaKnown RBP26.39■■□□□ 1.81
CPNE9-205ENST00000613455 ZNF853P0CG23 659 aa26.38■■□□□ 1.81
CPNE9-205ENST00000613455 IFT57Q9NWB7 429 aa26.38■■□□□ 1.81
CPNE9-205ENST00000613455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.38■■□□□ 1.81
CPNE9-205ENST00000613455 AKAP4Q5JQC9 854 aa26.37■■□□□ 1.81
CPNE9-205ENST00000613455 WNK3Q9BYP7 1800 aa26.37■■□□□ 1.81
CPNE9-205ENST00000613455 SUPT16HQ9Y5B9 1047 aaKnown RBP26.36■■□□□ 1.81
CPNE9-205ENST00000613455 ADAMTS7Q9UKP4 1686 aa26.36■■□□□ 1.81
CPNE9-205ENST00000613455 SHANK3Q9BYB0 1731 aa26.36■■□□□ 1.81
CPNE9-205ENST00000613455 CEMIPQ8WUJ3 1361 aa26.35■■□□□ 1.81
CPNE9-205ENST00000613455 IL17REQ8NFR9 667 aa26.35■■□□□ 1.81
CPNE9-205ENST00000613455 CFAP44Q96MT7 982 aa26.35■■□□□ 1.81
CPNE9-205ENST00000613455 RCAN3Q9UKA8 241 aa26.35■■□□□ 1.81
CPNE9-205ENST00000613455 IL2RBP14784 551 aa26.34■■□□□ 1.81
CPNE9-205ENST00000613455 GNAI1P63096 354 aa26.34■■□□□ 1.81
CPNE9-205ENST00000613455 C8orf37Q96NL8 207 aa26.34■■□□□ 1.81
CPNE9-205ENST00000613455 USP35Q9P2H5 1018 aa26.34■■□□□ 1.81
CPNE9-205ENST00000613455 SPG7Q9UQ90 795 aa26.34■■□□□ 1.81
CPNE9-205ENST00000613455 DISP2A7MBM2 1401 aa26.34■■□□□ 1.81
CPNE9-205ENST00000613455 LAS1LQ9Y4W2 734 aaKnown RBP26.34■■□□□ 1.81
CPNE9-205ENST00000613455 C1orf141Q5JVX7 400 aa26.33■■□□□ 1.81
CPNE9-205ENST00000613455 BCL9LQ86UU0 1499 aa26.32■■□□□ 1.8
CPNE9-205ENST00000613455 MBIPQ9NS73 344 aa26.31■■□□□ 1.8
CPNE9-205ENST00000613455 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.31■■□□□ 1.8
CPNE9-205ENST00000613455 NGLY1Q96IV0 654 aa26.31■■□□□ 1.8
CPNE9-205ENST00000613455 SCN11AQ9UI33 1791 aa26.3■■□□□ 1.8
CPNE9-205ENST00000613455 PHKG2P15735 406 aa26.3■■□□□ 1.8
CPNE9-205ENST00000613455 FNBP4Q8N3X1 1017 aaPredicted RBP26.3■■□□□ 1.8
CPNE9-205ENST00000613455 LGR6Q9HBX8 967 aa26.3■■□□□ 1.8
CPNE9-205ENST00000613455 SPATA31A1Q5TZJ5 1347 aa26.29■■□□□ 1.8
CPNE9-205ENST00000613455 RNF123Q5XPI4 1314 aa26.29■■□□□ 1.8
CPNE9-205ENST00000613455 CHL1O00533 1208 aa26.29■■□□□ 1.8
CPNE9-205ENST00000613455 CYP27B1O15528 508 aa26.29■■□□□ 1.8
CPNE9-205ENST00000613455 UNC5CLQ8IV45 518 aa26.29■■□□□ 1.8
CPNE9-205ENST00000613455 EXOSC9Q06265 439 aaKnown RBP26.28■■□□□ 1.8
CPNE9-205ENST00000613455 MPRIPQ6WCQ1 1025 aa26.28■■□□□ 1.8
CPNE9-205ENST00000613455 KDM6AO15550 1401 aaPredicted RBP26.28■■□□□ 1.8
CPNE9-205ENST00000613455 SIPA1L3O60292 1781 aaPredicted RBP26.28■■□□□ 1.8
CPNE9-205ENST00000613455 SPATA31A5Q5VU36 1347 aa26.27■■□□□ 1.8
CPNE9-205ENST00000613455 SPATA31A7Q8IWB4 1347 aa26.27■■□□□ 1.8
CPNE9-205ENST00000613455 RNMTO43148 476 aaKnown RBP26.27■■□□□ 1.8
CPNE9-205ENST00000613455 IFNL2Q8IZJ0 200 aa26.27■■□□□ 1.8
CPNE9-205ENST00000613455 ZCRB1Q8TBF4 217 aaKnown RBP26.27■■□□□ 1.8
CPNE9-205ENST00000613455 PCDH11XQ9BZA7 1347 aa26.26■■□□□ 1.79
CPNE9-205ENST00000613455 PCDH11YQ9BZA8 1340 aa26.26■■□□□ 1.79
CPNE9-205ENST00000613455 THRAP3Q9Y2W1 955 aaKnown RBP26.24■■□□□ 1.79
CPNE9-205ENST00000613455 GTF3C3Q9Y5Q9 886 aa26.24■■□□□ 1.79
CPNE9-205ENST00000613455 MEX3CQ5U5Q3 659 aaKnown RBP26.23■■□□□ 1.79
CPNE9-205ENST00000613455 MIS18AQ9NYP9 233 aa26.23■■□□□ 1.79
CPNE9-205ENST00000613455 KDM3BQ7LBC6 1761 aa26.23■■□□□ 1.79
CPNE9-205ENST00000613455 CT47B1P0C2W7 299 aaPredicted RBP26.22■■□□□ 1.79
CPNE9-205ENST00000613455 TAF7Q15545 349 aaPredicted RBP26.22■■□□□ 1.79
CPNE9-205ENST00000613455 MRC1P22897 1456 aa26.22■■□□□ 1.79
CPNE9-205ENST00000613455 VPS72Q15906 364 aa26.22■■□□□ 1.79
CPNE9-205ENST00000613455 TSPYL4Q9UJ04 414 aa26.22■■□□□ 1.79
CPNE9-205ENST00000613455 USP21Q9UK80 565 aa26.21■■□□□ 1.79
CPNE9-205ENST00000613455 BABAM1Q9NWV8 329 aa26.2■■□□□ 1.79
CPNE9-205ENST00000613455 TNS2Q63HR2 1409 aa26.2■■□□□ 1.79
CPNE9-205ENST00000613455 HSP90AB1P08238 724 aaKnown RBP26.19■■□□□ 1.78
CPNE9-205ENST00000613455 RRP1P56182 461 aaKnown RBP26.19■■□□□ 1.78
CPNE9-205ENST00000613455 DCAF5Q96JK2 942 aa26.19■■□□□ 1.78
CPNE9-205ENST00000613455 RARSP54136 660 aaKnown RBP26.19■■□□□ 1.78
CPNE9-205ENST00000613455 TEFQ10587 303 aa26.19■■□□□ 1.78
CPNE9-205ENST00000613455 BARGINQ6ZT62 677 aa26.19■■□□□ 1.78
CPNE9-205ENST00000613455 TSPYL6Q8N831 410 aa26.19■■□□□ 1.78
CPNE9-205ENST00000613455 CCDC9Q9Y3X0 531 aaKnown RBP26.19■■□□□ 1.78
CPNE9-205ENST00000613455 C8orf58Q8NAV2 365 aa26.18■■□□□ 1.78
CPNE9-205ENST00000613455 CDCA7Q9BWT1 371 aaPredicted RBP26.18■■□□□ 1.78
CPNE9-205ENST00000613455 AFF2P51816 1311 aa26.17■■□□□ 1.78
CPNE9-205ENST00000613455 NKX1-1Q15270 411 aaPredicted RBP26.17■■□□□ 1.78
CPNE9-205ENST00000613455 TOGARAM1Q9Y4F4 1720 aa26.17■■□□□ 1.78
CPNE9-205ENST00000613455 BCAR3O75815 825 aa26.16■■□□□ 1.78
CPNE9-205ENST00000613455 KRT24Q2M2I5 525 aa26.16■■□□□ 1.78
CPNE9-205ENST00000613455 DDX54Q8TDD1 881 aaKnown RBP26.16■■□□□ 1.78
CPNE9-205ENST00000613455 VAMP4O75379 141 aa26.15■■□□□ 1.78
CPNE9-205ENST00000613455 NEFLP07196 543 aa26.15■■□□□ 1.78
CPNE9-205ENST00000613455 TWISTNBQ3B726 338 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms