RNA–Protein interactions for RNA: ENST00000612954.4

PCDH17-203, Transcript of protocadherin 17, humanhuman

TSL 5

Gene PCDH17, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-203ENST00000612954 BCL9O00512 1426 aa17.43■□□□□ 0.38
PCDH17-203ENST00000612954 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
PCDH17-203ENST00000612954 NHSQ6T4R5 1651 aa17.43■□□□□ 0.38
PCDH17-203ENST00000612954 DOT1LQ8TEK3 1739 aa17.43■□□□□ 0.38
PCDH17-203ENST00000612954 DDX54Q8TDD1 881 aaKnown RBP17.43■□□□□ 0.38
PCDH17-203ENST00000612954 IL13P35225 146 aa17.42■□□□□ 0.38
PCDH17-203ENST00000612954 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
PCDH17-203ENST00000612954 TATP17735 454 aaPredicted RBP17.41■□□□□ 0.38
PCDH17-203ENST00000612954 AEBP1Q8IUX7 1158 aa17.41■□□□□ 0.38
PCDH17-203ENST00000612954 ZCRB1Q8TBF4 217 aaKnown RBP17.41■□□□□ 0.38
PCDH17-203ENST00000612954 SRCAPQ6ZRS2 3230 aa17.41■□□□□ 0.38
PCDH17-203ENST00000612954 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
PCDH17-203ENST00000612954 KCNQ2O43526 872 aa17.39■□□□□ 0.38
PCDH17-203ENST00000612954 PPP2R1AP30153 589 aa17.39■□□□□ 0.38
PCDH17-203ENST00000612954 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.38
PCDH17-203ENST00000612954 BTAF1O14981 1849 aa17.39■□□□□ 0.37
PCDH17-203ENST00000612954 ACSBG1Q96GR2 724 aa17.39■□□□□ 0.37
PCDH17-203ENST00000612954 TOGARAM1Q9Y4F4 1720 aa17.39■□□□□ 0.37
PCDH17-203ENST00000612954 APBA3O96018 575 aa17.38■□□□□ 0.37
PCDH17-203ENST00000612954 BAG6P46379 1132 aa17.38■□□□□ 0.37
PCDH17-203ENST00000612954 RREB1Q92766 1687 aa17.37■□□□□ 0.37
PCDH17-203ENST00000612954 CYP27B1O15528 508 aa17.37■□□□□ 0.37
PCDH17-203ENST00000612954 KDRP35968 1356 aa17.37■□□□□ 0.37
PCDH17-203ENST00000612954 RGPD3A6NKT7 1758 aaPredicted RBP17.36■□□□□ 0.37
PCDH17-203ENST00000612954 RGPD4Q7Z3J3 1758 aa17.36■□□□□ 0.37
PCDH17-203ENST00000612954 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
PCDH17-203ENST00000612954 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
PCDH17-203ENST00000612954 PCDH11XQ9BZA7 1347 aa17.36■□□□□ 0.37
PCDH17-203ENST00000612954 PCDH11YQ9BZA8 1340 aa17.36■□□□□ 0.37
PCDH17-203ENST00000612954 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
PCDH17-203ENST00000612954 EZH2Q15910 746 aaKnown RBP17.36■□□□□ 0.37
PCDH17-203ENST00000612954 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
PCDH17-203ENST00000612954 ITGB4P16144 1822 aa17.35■□□□□ 0.37
PCDH17-203ENST00000612954 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
PCDH17-203ENST00000612954 HMOX1P09601 288 aa17.33■□□□□ 0.37
PCDH17-203ENST00000612954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCDH17-203ENST00000612954 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
PCDH17-203ENST00000612954 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
PCDH17-203ENST00000612954 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
PCDH17-203ENST00000612954 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
PCDH17-203ENST00000612954 SYTL4Q96C24 671 aaPredicted RBP17.3■□□□□ 0.36
PCDH17-203ENST00000612954 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
PCDH17-203ENST00000612954 PLSCR1O15162 318 aa17.29■□□□□ 0.36
PCDH17-203ENST00000612954 PHKG2P15735 406 aa17.29■□□□□ 0.36
PCDH17-203ENST00000612954 CFAP53Q96M91 514 aa17.29■□□□□ 0.36
PCDH17-203ENST00000612954 MIER1Q8N108 512 aa17.29■□□□□ 0.36
PCDH17-203ENST00000612954 NKX1-1Q15270 411 aaPredicted RBP17.28■□□□□ 0.36
PCDH17-203ENST00000612954 PROM2Q8N271 834 aa17.28■□□□□ 0.36
PCDH17-203ENST00000612954 LY75O60449 1722 aa17.28■□□□□ 0.36
PCDH17-203ENST00000612954 RALBP1Q15311 655 aa17.27■□□□□ 0.36
PCDH17-203ENST00000612954 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
PCDH17-203ENST00000612954 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
PCDH17-203ENST00000612954 PLEKHO1Q53GL0 409 aaPredicted RBP17.26■□□□□ 0.35
PCDH17-203ENST00000612954 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
PCDH17-203ENST00000612954 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
PCDH17-203ENST00000612954 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
PCDH17-203ENST00000612954 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
PCDH17-203ENST00000612954 MPRIPQ6WCQ1 1025 aa17.24■□□□□ 0.35
PCDH17-203ENST00000612954 PRKRIP1Q9H875 184 aaPredicted RBP17.24■□□□□ 0.35
PCDH17-203ENST00000612954 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
PCDH17-203ENST00000612954 U2AF1L5P0DN76 240 aaPredicted RBP17.23■□□□□ 0.35
PCDH17-203ENST00000612954 U2AF1Q01081 240 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDH17-203ENST00000612954 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
PCDH17-203ENST00000612954 PAPPAQ13219 1627 aa17.23■□□□□ 0.35
PCDH17-203ENST00000612954 PSDA5PKW4 1024 aaPredicted RBP17.22■□□□□ 0.35
PCDH17-203ENST00000612954 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
PCDH17-203ENST00000612954 PRKAR2BP31323 418 aa17.21■□□□□ 0.35
PCDH17-203ENST00000612954 PIGBQ92521 554 aa17.21■□□□□ 0.35
PCDH17-203ENST00000612954 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.35
PCDH17-203ENST00000612954 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
PCDH17-203ENST00000612954 KCNQ4P56696 695 aa17.21■□□□□ 0.35
PCDH17-203ENST00000612954 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
PCDH17-203ENST00000612954 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
PCDH17-203ENST00000612954 LRRC4BQ9NT99 713 aa17.21■□□□□ 0.35
PCDH17-203ENST00000612954 ADAMTS7Q9UKP4 1686 aa17.21■□□□□ 0.35
PCDH17-203ENST00000612954 R3HDM1Q15032 1099 aaKnown RBP17.2■□□□□ 0.34
PCDH17-203ENST00000612954 DCAF5Q96JK2 942 aa17.2■□□□□ 0.34
PCDH17-203ENST00000612954 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
PCDH17-203ENST00000612954 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
PCDH17-203ENST00000612954 AKAP4Q5JQC9 854 aa17.18■□□□□ 0.34
PCDH17-203ENST00000612954 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
PCDH17-203ENST00000612954 DLG5Q8TDM6 1919 aa17.18■□□□□ 0.34
PCDH17-203ENST00000612954 TUBGCP6Q96RT7 1819 aa17.17■□□□□ 0.34
PCDH17-203ENST00000612954 C5P01031 1676 aa17.17■□□□□ 0.34
PCDH17-203ENST00000612954 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
PCDH17-203ENST00000612954 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
PCDH17-203ENST00000612954 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
PCDH17-203ENST00000612954 FCHSD2O94868 740 aa17.16■□□□□ 0.34
PCDH17-203ENST00000612954 MRC1P22897 1456 aa17.16■□□□□ 0.34
PCDH17-203ENST00000612954 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
PCDH17-203ENST00000612954 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.34
PCDH17-203ENST00000612954 CCNL1Q9UK58 526 aaPredicted RBP17.14■□□□□ 0.33
PCDH17-203ENST00000612954 MAP3K5Q99683 1374 aa17.14■□□□□ 0.33
PCDH17-203ENST00000612954 CASZ1Q86V15 1759 aa17.14■□□□□ 0.33
PCDH17-203ENST00000612954 CABP4P57796 275 aa17.14■□□□□ 0.33
PCDH17-203ENST00000612954 SLC27A3Q5K4L6 730 aa17.14■□□□□ 0.33
PCDH17-203ENST00000612954 NBPF14Q5TI25 921 aa17.14■□□□□ 0.33
PCDH17-203ENST00000612954 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
PCDH17-203ENST00000612954 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
PCDH17-203ENST00000612954 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms