RNA–Protein interactions for RNA: ENST00000612746.1

TPTE-202, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-202ENST00000612746 SBF2Q86WG5 1849 aa13.82□□□□□ -0.2
TPTE-202ENST00000612746 TATP17735 454 aaPredicted RBP13.82□□□□□ -0.2
TPTE-202ENST00000612746 PTF1AQ7RTS3 328 aa13.82□□□□□ -0.2
TPTE-202ENST00000612746 DDX54Q8TDD1 881 aaKnown RBP13.82□□□□□ -0.2
TPTE-202ENST00000612746 CAMKK2Q96RR4 588 aa13.82□□□□□ -0.2
TPTE-202ENST00000612746 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
TPTE-202ENST00000612746 PARD3Q8TEW0 1356 aa13.81□□□□□ -0.2
TPTE-202ENST00000612746 IL13P35225 146 aa13.8□□□□□ -0.2
TPTE-202ENST00000612746 PLSCR1O15162 318 aa13.8□□□□□ -0.2
TPTE-202ENST00000612746 KCNQ2O43526 872 aa13.8□□□□□ -0.2
TPTE-202ENST00000612746 EZH2Q15910 746 aaKnown RBP13.8□□□□□ -0.2
TPTE-202ENST00000612746 SHANK3Q9BYB0 1731 aa13.8□□□□□ -0.2
TPTE-202ENST00000612746 PLEKHG2Q9H7P9 1386 aa13.8□□□□□ -0.2
TPTE-202ENST00000612746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.79□□□□□ -0.2
TPTE-202ENST00000612746 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
TPTE-202ENST00000612746 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
TPTE-202ENST00000612746 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
TPTE-202ENST00000612746 CYP27B1O15528 508 aa13.78□□□□□ -0.2
TPTE-202ENST00000612746 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
TPTE-202ENST00000612746 KDRP35968 1356 aa13.77□□□□□ -0.2
TPTE-202ENST00000612746 NHSQ6T4R5 1651 aa13.76□□□□□ -0.21
TPTE-202ENST00000612746 SPG7Q9UQ90 795 aa13.76□□□□□ -0.21
TPTE-202ENST00000612746 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
TPTE-202ENST00000612746 AEBP1Q8IUX7 1158 aa13.76□□□□□ -0.21
TPTE-202ENST00000612746 COL3A1P02461 1466 aaPredicted RBP13.75□□□□□ -0.21
TPTE-202ENST00000612746 RGPD3A6NKT7 1758 aaPredicted RBP13.75□□□□□ -0.21
TPTE-202ENST00000612746 RGPD4Q7Z3J3 1758 aa13.75□□□□□ -0.21
TPTE-202ENST00000612746 DIAPH1O60610 1272 aaKnown RBP13.75□□□□□ -0.21
TPTE-202ENST00000612746 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
TPTE-202ENST00000612746 NKX1-1Q15270 411 aaPredicted RBP13.75□□□□□ -0.21
TPTE-202ENST00000612746 PROM2Q8N271 834 aa13.75□□□□□ -0.21
TPTE-202ENST00000612746 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
TPTE-202ENST00000612746 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
TPTE-202ENST00000612746 SULT6B1Q6IMI4 303 aa13.74□□□□□ -0.21
TPTE-202ENST00000612746 RREB1Q92766 1687 aa13.73□□□□□ -0.21
TPTE-202ENST00000612746 PHKG2P15735 406 aa13.72□□□□□ -0.21
TPTE-202ENST00000612746 AMOTQ4VCS5 1084 aa13.72□□□□□ -0.21
TPTE-202ENST00000612746 IFNL2Q8IZJ0 200 aa13.72□□□□□ -0.21
TPTE-202ENST00000612746 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.21
TPTE-202ENST00000612746 DOT1LQ8TEK3 1739 aa13.71□□□□□ -0.21
TPTE-202ENST00000612746 TXNRD1Q16881 649 aa13.71□□□□□ -0.21
TPTE-202ENST00000612746 PLEKHO1Q53GL0 409 aaPredicted RBP13.71□□□□□ -0.21
TPTE-202ENST00000612746 SYTL4Q96C24 671 aaPredicted RBP13.71□□□□□ -0.21
TPTE-202ENST00000612746 BTAF1O14981 1849 aa13.71□□□□□ -0.22
TPTE-202ENST00000612746 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
TPTE-202ENST00000612746 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
TPTE-202ENST00000612746 HMOX1P09601 288 aa13.7□□□□□ -0.22
TPTE-202ENST00000612746 RALBP1Q15311 655 aa13.68□□□□□ -0.22
TPTE-202ENST00000612746 TOGARAM1Q9Y4F4 1720 aa13.68□□□□□ -0.22
TPTE-202ENST00000612746 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
TPTE-202ENST00000612746 R3HDM1Q15032 1099 aaKnown RBP13.67□□□□□ -0.22
TPTE-202ENST00000612746 NBPF14Q5TI25 921 aa13.67□□□□□ -0.22
TPTE-202ENST00000612746 ZNF530Q6P9A1 599 aaPredicted RBP13.67□□□□□ -0.22
TPTE-202ENST00000612746 PSDA5PKW4 1024 aaPredicted RBP13.67□□□□□ -0.22
TPTE-202ENST00000612746 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
TPTE-202ENST00000612746 CENPBP07199 599 aaPredicted RBP13.67□□□□□ -0.22
TPTE-202ENST00000612746 MPRIPQ6WCQ1 1025 aa13.67□□□□□ -0.22
TPTE-202ENST00000612746 DCAF5Q96JK2 942 aa13.67□□□□□ -0.22
TPTE-202ENST00000612746 LRRC4BQ9NT99 713 aa13.67□□□□□ -0.22
TPTE-202ENST00000612746 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
TPTE-202ENST00000612746 PIGBQ92521 554 aa13.66□□□□□ -0.22
TPTE-202ENST00000612746 ANO8Q9HCE9 1232 aaPredicted RBP13.66□□□□□ -0.22
TPTE-202ENST00000612746 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
TPTE-202ENST00000612746 KDM6AO15550 1401 aaPredicted RBP13.65□□□□□ -0.22
TPTE-202ENST00000612746 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
TPTE-202ENST00000612746 ERVV-2B6SEH9 535 aa13.65□□□□□ -0.22
TPTE-202ENST00000612746 C1orf141Q5JVX7 400 aa13.65□□□□□ -0.22
TPTE-202ENST00000612746 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
TPTE-202ENST00000612746 AKAP4Q5JQC9 854 aa13.64□□□□□ -0.23
TPTE-202ENST00000612746 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
TPTE-202ENST00000612746 ITGB4P16144 1822 aa13.63□□□□□ -0.23
TPTE-202ENST00000612746 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
TPTE-202ENST00000612746 LY75O60449 1722 aa13.63□□□□□ -0.23
TPTE-202ENST00000612746 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
TPTE-202ENST00000612746 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
TPTE-202ENST00000612746 PAPPAQ13219 1627 aa13.63□□□□□ -0.23
TPTE-202ENST00000612746 PALLDQ8WX93 1383 aa13.63□□□□□ -0.23
TPTE-202ENST00000612746 FCHSD2O94868 740 aa13.62□□□□□ -0.23
TPTE-202ENST00000612746 SLC15A2Q16348 729 aa13.62□□□□□ -0.23
TPTE-202ENST00000612746 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
TPTE-202ENST00000612746 MYBBP1AQ9BQG0 1328 aaKnown RBP13.62□□□□□ -0.23
TPTE-202ENST00000612746 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
TPTE-202ENST00000612746 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
TPTE-202ENST00000612746 CCNL1Q9UK58 526 aaPredicted RBP13.61□□□□□ -0.23
TPTE-202ENST00000612746 KCNQ4P56696 695 aa13.61□□□□□ -0.23
TPTE-202ENST00000612746 PHACTR3Q96KR7 559 aa13.61□□□□□ -0.23
TPTE-202ENST00000612746 STK32BQ9NY57 414 aa13.61□□□□□ -0.23
TPTE-202ENST00000612746 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
TPTE-202ENST00000612746 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
TPTE-202ENST00000612746 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
TPTE-202ENST00000612746 ATG3Q9NT62 314 aa13.6□□□□□ -0.23
TPTE-202ENST00000612746 CABP4P57796 275 aa13.59□□□□□ -0.23
TPTE-202ENST00000612746 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
TPTE-202ENST00000612746 LGR6Q9HBX8 967 aa13.59□□□□□ -0.23
TPTE-202ENST00000612746 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
TPTE-202ENST00000612746 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
TPTE-202ENST00000612746 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.24
TPTE-202ENST00000612746 SIK1P57059 783 aa13.58□□□□□ -0.24
TPTE-202ENST00000612746 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
TPTE-202ENST00000612746 SCN11AQ9UI33 1791 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms