RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 TRAK2O60296 914 aa17.36■□□□□ 0.37
NDFIP2-205ENST00000612570 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
NDFIP2-205ENST00000612570 RNF123Q5XPI4 1314 aa17.35■□□□□ 0.37
NDFIP2-205ENST00000612570 EIF4A2Q14240 407 aaKnown RBP17.35■□□□□ 0.37
NDFIP2-205ENST00000612570 KDM4AO75164 1064 aa17.35■□□□□ 0.37
NDFIP2-205ENST00000612570 G3V3G9 751 aa17.35■□□□□ 0.37
NDFIP2-205ENST00000612570 DCAF8Q5TAQ9 597 aa17.35■□□□□ 0.37
NDFIP2-205ENST00000612570 RAD21O60216 631 aa17.35■□□□□ 0.37
NDFIP2-205ENST00000612570 MPRIPQ6WCQ1 1025 aa17.35■□□□□ 0.37
NDFIP2-205ENST00000612570 SIL1Q9H173 461 aa17.35■□□□□ 0.37
NDFIP2-205ENST00000612570 ERC1Q8IUD2 1116 aa17.34■□□□□ 0.37
NDFIP2-205ENST00000612570 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
NDFIP2-205ENST00000612570 FAM43AQ8N2R8 423 aa17.34■□□□□ 0.37
NDFIP2-205ENST00000612570 C8orf58Q8NAV2 365 aa17.34■□□□□ 0.37
NDFIP2-205ENST00000612570 PREX2Q70Z35 1606 aa17.33■□□□□ 0.37
NDFIP2-205ENST00000612570 ABCC1P33527 1531 aa17.33■□□□□ 0.37
NDFIP2-205ENST00000612570 KDM5CP41229 1560 aa17.33■□□□□ 0.36
NDFIP2-205ENST00000612570 K7ELQ4 463 aaPredicted RBP17.33■□□□□ 0.36
NDFIP2-205ENST00000612570 AKAP17AQ02040 695 aaKnown RBP17.33■□□□□ 0.36
NDFIP2-205ENST00000612570 FLIIQ13045 1269 aa17.33■□□□□ 0.36
NDFIP2-205ENST00000612570 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
NDFIP2-205ENST00000612570 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.36
NDFIP2-205ENST00000612570 ARHGAP45Q92619 1136 aa17.33■□□□□ 0.36
NDFIP2-205ENST00000612570 MAGI2Q86UL8 1455 aa17.32■□□□□ 0.36
NDFIP2-205ENST00000612570 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
NDFIP2-205ENST00000612570 NEO1Q92859 1461 aa17.32■□□□□ 0.36
NDFIP2-205ENST00000612570 AMOTQ4VCS5 1084 aa17.32■□□□□ 0.36
NDFIP2-205ENST00000612570 PTPRCP08575 1304 aa17.32■□□□□ 0.36
NDFIP2-205ENST00000612570 HDAC1Q13547 482 aaPredicted RBP17.32■□□□□ 0.36
NDFIP2-205ENST00000612570 CAVIN1Q6NZI2 390 aaKnown RBP17.32■□□□□ 0.36
NDFIP2-205ENST00000612570 TSPYL6Q8N831 410 aa17.32■□□□□ 0.36
NDFIP2-205ENST00000612570 MCM2P49736 904 aa17.31■□□□□ 0.36
NDFIP2-205ENST00000612570 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
NDFIP2-205ENST00000612570 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
NDFIP2-205ENST00000612570 GOLGA6L1Q8N7Z2 621 aa17.3■□□□□ 0.36
NDFIP2-205ENST00000612570 YEATS2Q9ULM3 1422 aa17.3■□□□□ 0.36
NDFIP2-205ENST00000612570 CHD1O14646 1710 aa17.3■□□□□ 0.36
NDFIP2-205ENST00000612570 VAMP4O75379 141 aa17.3■□□□□ 0.36
NDFIP2-205ENST00000612570 DNAJC2Q99543 621 aaKnown RBP17.3■□□□□ 0.36
NDFIP2-205ENST00000612570 SBNO2Q9Y2G9 1366 aa17.3■□□□□ 0.36
NDFIP2-205ENST00000612570 CHMP4CQ96CF2 233 aa17.3■□□□□ 0.36
NDFIP2-205ENST00000612570 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
NDFIP2-205ENST00000612570 BLMP54132 1417 aaPredicted RBP17.29■□□□□ 0.36
NDFIP2-205ENST00000612570 INSRP06213 1382 aa17.29■□□□□ 0.36
NDFIP2-205ENST00000612570 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
NDFIP2-205ENST00000612570 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
NDFIP2-205ENST00000612570 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 SYNE3Q6ZMZ3 975 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 R3HCC1Q9Y3T6 440 aaKnown RBP17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 CDC42BPAQ5VT25 1732 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 MX1P20591 662 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 BMP2KLQ5H9B9 411 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 AACSQ86V21 672 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 TBC1D2Q9BYX2 928 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 ZFYVE9O95405 1425 aa17.28■□□□□ 0.36
NDFIP2-205ENST00000612570 ZMYM4Q5VZL5 1548 aa17.27■□□□□ 0.36
NDFIP2-205ENST00000612570 PRPF40AO75400 957 aaKnown RBP17.27■□□□□ 0.35
NDFIP2-205ENST00000612570 KCNA6P17658 529 aa17.27■□□□□ 0.35
NDFIP2-205ENST00000612570 KRT24Q2M2I5 525 aa17.27■□□□□ 0.35
NDFIP2-205ENST00000612570 KIF1BPQ96EK5 621 aa17.27■□□□□ 0.35
NDFIP2-205ENST00000612570 TRDNQ13061 729 aa17.27■□□□□ 0.35
NDFIP2-205ENST00000612570 DNAAF4Q8WXU2 420 aa17.27■□□□□ 0.35
NDFIP2-205ENST00000612570 PSMA5P28066 241 aa17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 MCM4P33991 863 aa17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 C8orf34Q49A92 452 aa17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 MEIS3Q99687 375 aa17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 KDM5DQ9BY66 1539 aa17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 HIP1O00291 1037 aa17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 TBX22Q9Y458 520 aa17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
NDFIP2-205ENST00000612570 MTHFSDQ2M296 383 aaKnown RBP17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 TRPM2O94759 1503 aa17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 NUCB1Q02818 461 aa17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 MAP3K19Q56UN5 1328 aa17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 TSR1Q2NL82 804 aaKnown RBP17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 CWC27Q6UX04 472 aaKnown RBP17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
NDFIP2-205ENST00000612570 FIBPO43427 364 aa17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 TRIM29Q14134 588 aa17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 DHX16O60231 1041 aaKnown RBP17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 MRE11P49959 708 aa17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 MTMR7Q9Y216 660 aa17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 ANXA1P04083 346 aa17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 TBC1D9Q6ZT07 1266 aa17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 KIF6Q6ZMV9 814 aa17.24■□□□□ 0.35
NDFIP2-205ENST00000612570 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms