RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
PCDHGC3-202ENST00000611950 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-202ENST00000611950 LRP6O75581 1613 aa13.4□□□□□ -0.26
PCDHGC3-202ENST00000611950 NUTM2BA6NNL0 878 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-202ENST00000611950 NUTM2EB1AL46 878 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-202ENST00000611950 TMPOP42166 694 aaKnown RBP13.4□□□□□ -0.26
PCDHGC3-202ENST00000611950 NUTM2AQ8IVF1 878 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-202ENST00000611950 HMOX1P09601 288 aa13.4□□□□□ -0.27
PCDHGC3-202ENST00000611950 MMP14P50281 582 aa13.4□□□□□ -0.27
PCDHGC3-202ENST00000611950 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.27
PCDHGC3-202ENST00000611950 C1orf115Q9H7X2 142 aa13.4□□□□□ -0.27
PCDHGC3-202ENST00000611950 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
PCDHGC3-202ENST00000611950 ZNF772Q68DY9 489 aaPredicted RBP13.39□□□□□ -0.27
PCDHGC3-202ENST00000611950 WAPLQ7Z5K2 1190 aa13.39□□□□□ -0.27
PCDHGC3-202ENST00000611950 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
PCDHGC3-202ENST00000611950 LNPKQ9C0E8 428 aa13.38□□□□□ -0.27
PCDHGC3-202ENST00000611950 ADAMTS13Q76LX8 1427 aa13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 CLGNO14967 610 aa13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 IRX3P78415 501 aaPredicted RBP13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 HDGFL2Q7Z4V5 671 aaPredicted RBP13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 PNPLA6Q8IY17 1366 aa13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 VIRMAQ69YN4 1812 aaKnown RBP13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 NCOA3Q9Y6Q9 1424 aa13.37□□□□□ -0.27
PCDHGC3-202ENST00000611950 PATL2C9JE40 543 aaKnown RBP13.36□□□□□ -0.27
PCDHGC3-202ENST00000611950 DIAPH1O60610 1272 aaKnown RBP13.36□□□□□ -0.27
PCDHGC3-202ENST00000611950 SMAP1Q8IYB5 467 aaPredicted RBP13.36□□□□□ -0.27
PCDHGC3-202ENST00000611950 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGC3-202ENST00000611950 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
PCDHGC3-202ENST00000611950 CLSTN1O94985 981 aa13.35□□□□□ -0.27
PCDHGC3-202ENST00000611950 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
PCDHGC3-202ENST00000611950 RXRBP28702 533 aa13.35□□□□□ -0.27
PCDHGC3-202ENST00000611950 BRINP3Q76B58 766 aa13.35□□□□□ -0.27
PCDHGC3-202ENST00000611950 AHDC1Q5TGY3 1603 aaPredicted RBP13.35□□□□□ -0.27
PCDHGC3-202ENST00000611950 PTMAP06454 111 aaKnown RBP13.35□□□□□ -0.27
PCDHGC3-202ENST00000611950 ATF7IPQ6VMQ6 1270 aa13.35□□□□□ -0.27
PCDHGC3-202ENST00000611950 ZHX1Q9UKY1 873 aaPredicted RBP13.35□□□□□ -0.27
PCDHGC3-202ENST00000611950 DIP2AQ14689 1571 aa13.34□□□□□ -0.27
PCDHGC3-202ENST00000611950 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
PCDHGC3-202ENST00000611950 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
PCDHGC3-202ENST00000611950 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
PCDHGC3-202ENST00000611950 PLCD4Q9BRC7 762 aa13.34□□□□□ -0.27
PCDHGC3-202ENST00000611950 PIK3R4Q99570 1358 aa13.33□□□□□ -0.27
PCDHGC3-202ENST00000611950 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
PCDHGC3-202ENST00000611950 PNNQ9H307 717 aaKnown RBP13.33□□□□□ -0.28
PCDHGC3-202ENST00000611950 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
PCDHGC3-202ENST00000611950 HDAC5Q9UQL6 1122 aa13.33□□□□□ -0.28
PCDHGC3-202ENST00000611950 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
PCDHGC3-202ENST00000611950 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
PCDHGC3-202ENST00000611950 IL16Q14005 1332 aa13.32□□□□□ -0.28
PCDHGC3-202ENST00000611950 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
PCDHGC3-202ENST00000611950 ANTXR1Q9H6X2 564 aa13.32□□□□□ -0.28
PCDHGC3-202ENST00000611950 AFF2P51816 1311 aa13.32□□□□□ -0.28
PCDHGC3-202ENST00000611950 ATP7BP35670 1465 aa13.32□□□□□ -0.28
PCDHGC3-202ENST00000611950 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
PCDHGC3-202ENST00000611950 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
PCDHGC3-202ENST00000611950 TSPYL6Q8N831 410 aa13.31□□□□□ -0.28
PCDHGC3-202ENST00000611950 DDX19BQ9UMR2 479 aa13.31□□□□□ -0.28
PCDHGC3-202ENST00000611950 EMILIN1Q9Y6C2 1016 aa13.31□□□□□ -0.28
PCDHGC3-202ENST00000611950 METP08581 1390 aa13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 SRCAPQ6ZRS2 3230 aa13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 SOX12O15370 315 aa13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 FCHSD2O94868 740 aa13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 DCTN1Q14203 1278 aa13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 PPP4R3BQ5MIZ7 849 aa13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 DDX17Q92841 729 aaKnown RBP13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 C8orf37Q96NL8 207 aa13.3□□□□□ -0.28
PCDHGC3-202ENST00000611950 MCCP23508 829 aa13.29□□□□□ -0.28
PCDHGC3-202ENST00000611950 ANKRD45Q5TZF3 282 aa13.29□□□□□ -0.28
PCDHGC3-202ENST00000611950 FAM83GA6ND36 823 aa13.29□□□□□ -0.28
PCDHGC3-202ENST00000611950 UTP14CQ5TAP6 766 aaKnown RBP13.29□□□□□ -0.28
PCDHGC3-202ENST00000611950 NME9Q86XW9 330 aa13.29□□□□□ -0.28
PCDHGC3-202ENST00000611950 APBB1O00213 710 aa13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 ZNF622Q969S3 477 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 PANK2Q9BZ23 570 aa13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 PPIP5K1Q6PFW1 1433 aa13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 MAP2P11137 1827 aaKnown RBP13.28□□□□□ -0.28
PCDHGC3-202ENST00000611950 PSEN1P49768 467 aa13.27□□□□□ -0.28
PCDHGC3-202ENST00000611950 LRRC59Q96AG4 307 aaKnown RBP13.27□□□□□ -0.28
PCDHGC3-202ENST00000611950 DCCP43146 1447 aa13.27□□□□□ -0.29
PCDHGC3-202ENST00000611950 ZBTB40Q9NUA8 1239 aa13.27□□□□□ -0.29
PCDHGC3-202ENST00000611950 MST1RQ04912 1400 aa13.27□□□□□ -0.29
PCDHGC3-202ENST00000611950 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-202ENST00000611950 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-202ENST00000611950 XRN1Q8IZH2 1706 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-202ENST00000611950 CLCN1P35523 988 aa13.26□□□□□ -0.29
PCDHGC3-202ENST00000611950 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-202ENST00000611950 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-202ENST00000611950 NHSL1Q5SYE7 1610 aa13.25□□□□□ -0.29
PCDHGC3-202ENST00000611950 ADAMTS2O95450 1211 aa13.25□□□□□ -0.29
PCDHGC3-202ENST00000611950 IL13P35225 146 aa13.25□□□□□ -0.29
PCDHGC3-202ENST00000611950 HDAC1Q13547 482 aaPredicted RBP13.25□□□□□ -0.29
PCDHGC3-202ENST00000611950 HSCBQ8IWL3 235 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms