RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 RBSNQ9H1K0 784 aa18.63■□□□□ 0.57
PCDHGB1-202ENST00000611598 RBM27Q9P2N5 1060 aaKnown RBP18.63■□□□□ 0.57
PCDHGB1-202ENST00000611598 ATP7BP35670 1465 aa18.63■□□□□ 0.57
PCDHGB1-202ENST00000611598 DIP2BQ9P265 1576 aa18.63■□□□□ 0.57
PCDHGB1-202ENST00000611598 CEP85Q6P2H3 762 aa18.62■□□□□ 0.57
PCDHGB1-202ENST00000611598 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
PCDHGB1-202ENST00000611598 ZDHHC9Q9Y397 364 aa18.62■□□□□ 0.57
PCDHGB1-202ENST00000611598 RGS12O14924 1447 aa18.62■□□□□ 0.57
PCDHGB1-202ENST00000611598 CDK12Q9NYV4 1490 aaPredicted RBP18.61■□□□□ 0.57
PCDHGB1-202ENST00000611598 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
PCDHGB1-202ENST00000611598 KIF24Q5T7B8 1368 aa18.61■□□□□ 0.57
PCDHGB1-202ENST00000611598 PRPF40AO75400 957 aaKnown RBP18.61■□□□□ 0.57
PCDHGB1-202ENST00000611598 PRIM1P49642 420 aaKnown RBP18.61■□□□□ 0.57
PCDHGB1-202ENST00000611598 GPT2Q8TD30 523 aa18.61■□□□□ 0.57
PCDHGB1-202ENST00000611598 MSH6P52701 1360 aa18.6■□□□□ 0.57
PCDHGB1-202ENST00000611598 TPM2P07951 284 aa18.6■□□□□ 0.57
PCDHGB1-202ENST00000611598 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
PCDHGB1-202ENST00000611598 MSNP26038 577 aaKnown RBP18.59■□□□□ 0.57
PCDHGB1-202ENST00000611598 MEIS3Q99687 375 aa18.59■□□□□ 0.57
PCDHGB1-202ENST00000611598 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
PCDHGB1-202ENST00000611598 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
PCDHGB1-202ENST00000611598 OFD1O75665 1012 aa18.58■□□□□ 0.57
PCDHGB1-202ENST00000611598 STAG3Q9UJ98 1225 aa18.58■□□□□ 0.57
PCDHGB1-202ENST00000611598 RTL1A6NKG5 1358 aa18.58■□□□□ 0.57
PCDHGB1-202ENST00000611598 EDC4Q6P2E9 1401 aaKnown RBP18.58■□□□□ 0.56
PCDHGB1-202ENST00000611598 ST18O60284 1047 aa18.58■□□□□ 0.56
PCDHGB1-202ENST00000611598 FOXD4L5Q5VV16 416 aaPredicted RBP18.58■□□□□ 0.56
PCDHGB1-202ENST00000611598 FOXD4L4Q8WXT5 416 aaPredicted RBP18.58■□□□□ 0.56
PCDHGB1-202ENST00000611598 CPSF1Q10570 1443 aaKnown RBP18.58■□□□□ 0.56
PCDHGB1-202ENST00000611598 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
PCDHGB1-202ENST00000611598 NSFL1CQ9UNZ2 370 aaKnown RBP18.57■□□□□ 0.56
PCDHGB1-202ENST00000611598 RPAP2Q8IXW5 612 aaPredicted RBP18.57■□□□□ 0.56
PCDHGB1-202ENST00000611598 NEO1Q92859 1461 aa18.56■□□□□ 0.56
PCDHGB1-202ENST00000611598 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
PCDHGB1-202ENST00000611598 MCM10Q7L590 875 aa18.56■□□□□ 0.56
PCDHGB1-202ENST00000611598 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.56■□□□□ 0.56
PCDHGB1-202ENST00000611598 CPS1P31327 1500 aa18.55■□□□□ 0.56
PCDHGB1-202ENST00000611598 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
PCDHGB1-202ENST00000611598 COG3Q96JB2 828 aa18.55■□□□□ 0.56
PCDHGB1-202ENST00000611598 TMEM63CQ9P1W3 806 aa18.55■□□□□ 0.56
PCDHGB1-202ENST00000611598 PDLIM2Q96JY6 352 aa18.55■□□□□ 0.56
PCDHGB1-202ENST00000611598 ZMYND15Q9H091 742 aa18.54■□□□□ 0.56
PCDHGB1-202ENST00000611598 KIF13AQ9H1H9 1805 aa18.54■□□□□ 0.56
PCDHGB1-202ENST00000611598 REC8O95072 547 aa18.53■□□□□ 0.56
PCDHGB1-202ENST00000611598 TSHZ3Q63HK5 1081 aa18.53■□□□□ 0.56
PCDHGB1-202ENST00000611598 SYCE3A1L190 88 aa18.53■□□□□ 0.56
PCDHGB1-202ENST00000611598 WASLO00401 505 aaPredicted RBP18.53■□□□□ 0.56
PCDHGB1-202ENST00000611598 ERC2O15083 957 aa18.53■□□□□ 0.56
PCDHGB1-202ENST00000611598 SULT6B1Q6IMI4 303 aa18.53■□□□□ 0.56
PCDHGB1-202ENST00000611598 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.52■□□□□ 0.56
PCDHGB1-202ENST00000611598 NOL7Q9UMY1 257 aaKnown RBP18.52■□□□□ 0.56
PCDHGB1-202ENST00000611598 RICTORQ6R327 1708 aa18.52■□□□□ 0.56
PCDHGB1-202ENST00000611598 CHL1O00533 1208 aa18.52■□□□□ 0.56
PCDHGB1-202ENST00000611598 XPCQ01831 940 aaPredicted RBP18.52■□□□□ 0.56
PCDHGB1-202ENST00000611598 DLC1Q96QB1 1528 aa18.52■□□□□ 0.55
PCDHGB1-202ENST00000611598 R3HCC1Q9Y3T6 440 aaKnown RBP18.51■□□□□ 0.55
PCDHGB1-202ENST00000611598 NEK4P51957 841 aa18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 HS1BP3Q53T59 392 aa18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 PDE1AP54750 535 aa18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 RBM10P98175 930 aaKnown RBP18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 LRSAM1Q6UWE0 723 aa18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 TMX3Q96JJ7 454 aa18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
PCDHGB1-202ENST00000611598 F6X3S4 739 aa18.49■□□□□ 0.55
PCDHGB1-202ENST00000611598 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
PCDHGB1-202ENST00000611598 PKNOX2Q96KN3 472 aa18.49■□□□□ 0.55
PCDHGB1-202ENST00000611598 SLC4A10Q6U841 1118 aa18.49■□□□□ 0.55
PCDHGB1-202ENST00000611598 TXNDC2Q86VQ3 553 aa18.49■□□□□ 0.55
PCDHGB1-202ENST00000611598 PTPRCP08575 1304 aa18.49■□□□□ 0.55
PCDHGB1-202ENST00000611598 NOL8Q76FK4 1167 aaKnown RBP18.48■□□□□ 0.55
PCDHGB1-202ENST00000611598 G2E3Q7L622 706 aa18.48■□□□□ 0.55
PCDHGB1-202ENST00000611598 RNF214Q8ND24 703 aa18.48■□□□□ 0.55
PCDHGB1-202ENST00000611598 PDCL3Q9H2J4 239 aa18.48■□□□□ 0.55
PCDHGB1-202ENST00000611598 ZNF500O60304 480 aaPredicted RBP18.48■□□□□ 0.55
PCDHGB1-202ENST00000611598 PALD1Q9ULE6 856 aa18.47■□□□□ 0.55
PCDHGB1-202ENST00000611598 EXOC6BQ9Y2D4 811 aa18.47■□□□□ 0.55
PCDHGB1-202ENST00000611598 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCDHGB1-202ENST00000611598 SETD1AO15047 1707 aaKnown RBP18.47■□□□□ 0.55
PCDHGB1-202ENST00000611598 ZKSCAN5Q9Y2L8 839 aa18.46■□□□□ 0.55
PCDHGB1-202ENST00000611598 KIAA0232Q92628 1395 aa18.46■□□□□ 0.55
PCDHGB1-202ENST00000611598 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
PCDHGB1-202ENST00000611598 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.55
PCDHGB1-202ENST00000611598 METP08581 1390 aa18.46■□□□□ 0.55
PCDHGB1-202ENST00000611598 TRHP20396 242 aaPredicted RBP18.45■□□□□ 0.54
PCDHGB1-202ENST00000611598 CCDC61Q9Y6R9 512 aa18.45■□□□□ 0.54
PCDHGB1-202ENST00000611598 HMMRO75330 724 aa18.45■□□□□ 0.54
PCDHGB1-202ENST00000611598 HAP1P54257 671 aaPredicted RBP18.45■□□□□ 0.54
PCDHGB1-202ENST00000611598 BRD1O95696 1058 aa18.44■□□□□ 0.54
PCDHGB1-202ENST00000611598 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
PCDHGB1-202ENST00000611598 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
PCDHGB1-202ENST00000611598 TSPOAP1O95153 1857 aa18.44■□□□□ 0.54
PCDHGB1-202ENST00000611598 ESYT1Q9BSJ8 1104 aa18.44■□□□□ 0.54
PCDHGB1-202ENST00000611598 MON2Q7Z3U7 1717 aa18.43■□□□□ 0.54
PCDHGB1-202ENST00000611598 PRR36Q9H6K5 1346 aa18.43■□□□□ 0.54
PCDHGB1-202ENST00000611598 FOXO3O43524 673 aa18.43■□□□□ 0.54
PCDHGB1-202ENST00000611598 TERF1P54274 439 aa18.43■□□□□ 0.54
PCDHGB1-202ENST00000611598 HSP90AB2PQ58FF8 381 aa18.43■□□□□ 0.54
PCDHGB1-202ENST00000611598 NRKQ7Z2Y5 1582 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms