RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 GCC1Q96CN9 775 aa15.02■□□□□ -0
SRRT-213ENST00000611405 HTATSF1O43719 755 aaKnown RBP15.02□□□□□ -0.01
SRRT-213ENST00000611405 HOXC9P31274 260 aa15.02□□□□□ -0.01
SRRT-213ENST00000611405 USP35Q9P2H5 1018 aa15.02□□□□□ -0.01
SRRT-213ENST00000611405 ADAMTSL3P82987 1691 aa15.01□□□□□ -0.01
SRRT-213ENST00000611405 SLC4A3P48751 1232 aa15□□□□□ -0.01
SRRT-213ENST00000611405 INTS3Q68E01 1043 aaKnown RBP15□□□□□ -0.01
SRRT-213ENST00000611405 CHD1LQ86WJ1 897 aa15□□□□□ -0.01
SRRT-213ENST00000611405 RTL1A6NKG5 1358 aa15□□□□□ -0.01
SRRT-213ENST00000611405 MARF1Q9Y4F3 1742 aaKnown RBP14.99□□□□□ -0.01
SRRT-213ENST00000611405 PTPRCP08575 1304 aa14.99□□□□□ -0.01
SRRT-213ENST00000611405 FOXO3O43524 673 aa14.99□□□□□ -0.01
SRRT-213ENST00000611405 NUTM2GQ5VZR2 741 aa14.99□□□□□ -0.01
SRRT-213ENST00000611405 TBC1D32Q96NH3 1257 aa14.99□□□□□ -0.01
SRRT-213ENST00000611405 ADGRL3Q9HAR2 1447 aa14.99□□□□□ -0.01
SRRT-213ENST00000611405 BECN1Q14457 450 aa14.98□□□□□ -0.01
SRRT-213ENST00000611405 KRT24Q2M2I5 525 aa14.98□□□□□ -0.01
SRRT-213ENST00000611405 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
SRRT-213ENST00000611405 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
SRRT-213ENST00000611405 C1orf115Q9H7X2 142 aa14.97□□□□□ -0.01
SRRT-213ENST00000611405 NPHP4O75161 1426 aaPredicted RBP14.97□□□□□ -0.01
SRRT-213ENST00000611405 LNPKQ9C0E8 428 aa14.97□□□□□ -0.01
SRRT-213ENST00000611405 C14orf37Q86TY3 774 aa14.96□□□□□ -0.01
SRRT-213ENST00000611405 SIRT2Q8IXJ6 389 aa14.96□□□□□ -0.01
SRRT-213ENST00000611405 NWD1Q149M9 1564 aa14.96□□□□□ -0.01
SRRT-213ENST00000611405 RGS12O14924 1447 aa14.96□□□□□ -0.02
SRRT-213ENST00000611405 GNAT3A8MTJ3 354 aa14.96□□□□□ -0.02
SRRT-213ENST00000611405 ANKRD45Q5TZF3 282 aa14.96□□□□□ -0.02
SRRT-213ENST00000611405 KCNA4P22459 653 aa14.95□□□□□ -0.02
SRRT-213ENST00000611405 PSME1Q06323 249 aa14.95□□□□□ -0.02
SRRT-213ENST00000611405 MIS18AQ9NYP9 233 aa14.95□□□□□ -0.02
SRRT-213ENST00000611405 IP6K1Q92551 441 aa14.94□□□□□ -0.02
SRRT-213ENST00000611405 BABAM1Q9NWV8 329 aa14.94□□□□□ -0.02
SRRT-213ENST00000611405 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
SRRT-213ENST00000611405 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
SRRT-213ENST00000611405 DEKP35659 375 aaKnown RBP14.93□□□□□ -0.02
SRRT-213ENST00000611405 KCNH5Q8NCM2 988 aa14.93□□□□□ -0.02
SRRT-213ENST00000611405 MAP3K5Q99683 1374 aa14.93□□□□□ -0.02
SRRT-213ENST00000611405 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
SRRT-213ENST00000611405 LTV1Q96GA3 475 aaPredicted RBP14.93□□□□□ -0.02
SRRT-213ENST00000611405 LRRC37A3O60309 1634 aa14.93□□□□□ -0.02
SRRT-213ENST00000611405 SOS1Q07889 1333 aaPredicted RBP14.93□□□□□ -0.02
SRRT-213ENST00000611405 RBM33Q96EV2 1170 aaKnown RBP14.93□□□□□ -0.02
SRRT-213ENST00000611405 RPAP2Q8IXW5 612 aaPredicted RBP14.92□□□□□ -0.02
SRRT-213ENST00000611405 NFAT5O94916 1531 aa14.92□□□□□ -0.02
SRRT-213ENST00000611405 ANKRD44Q8N8A2 993 aa14.92□□□□□ -0.02
SRRT-213ENST00000611405 C22orf23Q9BZE7 217 aa14.92□□□□□ -0.02
SRRT-213ENST00000611405 DCTPP1Q9H773 170 aa14.91□□□□□ -0.02
SRRT-213ENST00000611405 MFAP1P55081 439 aaKnown RBP14.9□□□□□ -0.02
SRRT-213ENST00000611405 CCT4P50991 539 aaKnown RBP14.9□□□□□ -0.02
SRRT-213ENST00000611405 TAF7Q15545 349 aaPredicted RBP14.9□□□□□ -0.02
SRRT-213ENST00000611405 STK31Q9BXU1 1019 aa14.9□□□□□ -0.02
SRRT-213ENST00000611405 MSH6P52701 1360 aa14.89□□□□□ -0.03
SRRT-213ENST00000611405 NFKBIBQ15653 356 aa14.89□□□□□ -0.03
SRRT-213ENST00000611405 IL17REQ8NFR9 667 aa14.89□□□□□ -0.03
SRRT-213ENST00000611405 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
SRRT-213ENST00000611405 ATP10DQ9P241 1426 aa14.89□□□□□ -0.03
SRRT-213ENST00000611405 LTN1O94822 1766 aa14.89□□□□□ -0.03
SRRT-213ENST00000611405 CEP85Q6P2H3 762 aa14.88□□□□□ -0.03
SRRT-213ENST00000611405 G2E3Q7L622 706 aa14.87□□□□□ -0.03
SRRT-213ENST00000611405 PHRF1Q9P1Y6 1649 aaKnown RBP14.87□□□□□ -0.03
SRRT-213ENST00000611405 USHBP1Q8N6Y0 703 aa14.87□□□□□ -0.03
SRRT-213ENST00000611405 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
SRRT-213ENST00000611405 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
SRRT-213ENST00000611405 MEIS3Q99687 375 aa14.86□□□□□ -0.03
SRRT-213ENST00000611405 TBC1D2Q9BYX2 928 aa14.86□□□□□ -0.03
SRRT-213ENST00000611405 ORAI2Q96SN7 254 aa14.86□□□□□ -0.03
SRRT-213ENST00000611405 RBM25P49756 843 aaKnown RBP14.85□□□□□ -0.03
SRRT-213ENST00000611405 SLIT3O75094 1523 aa14.85□□□□□ -0.03
SRRT-213ENST00000611405 HMMRO75330 724 aa14.85□□□□□ -0.03
SRRT-213ENST00000611405 PROSER2Q86WR7 435 aaPredicted RBP14.85□□□□□ -0.03
SRRT-213ENST00000611405 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
SRRT-213ENST00000611405 CEMIPQ8WUJ3 1361 aa14.85□□□□□ -0.03
SRRT-213ENST00000611405 GCP02774 474 aa14.84□□□□□ -0.03
SRRT-213ENST00000611405 FLIIQ13045 1269 aa14.84□□□□□ -0.03
SRRT-213ENST00000611405 SLC4A10Q6U841 1118 aa14.84□□□□□ -0.03
SRRT-213ENST00000611405 ARHGEF25Q86VW2 580 aa14.84□□□□□ -0.03
SRRT-213ENST00000611405 TULP1O00294 542 aaPredicted RBP14.84□□□□□ -0.03
SRRT-213ENST00000611405 PLEKHM2Q8IWE5 1019 aa14.84□□□□□ -0.03
SRRT-213ENST00000611405 F6X3S4 739 aa14.83□□□□□ -0.03
SRRT-213ENST00000611405 ZBTB7CA1YPR0 619 aa14.83□□□□□ -0.04
SRRT-213ENST00000611405 PLEKHO1Q53GL0 409 aaPredicted RBP14.82□□□□□ -0.04
SRRT-213ENST00000611405 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
SRRT-213ENST00000611405 CDC45O75419 566 aa14.82□□□□□ -0.04
SRRT-213ENST00000611405 AMOTQ4VCS5 1084 aa14.82□□□□□ -0.04
SRRT-213ENST00000611405 C19orf44Q9H6X5 657 aa14.82□□□□□ -0.04
SRRT-213ENST00000611405 FAM208AQ9UK61 1670 aaKnown RBP14.82□□□□□ -0.04
SRRT-213ENST00000611405 GNAI2P04899 355 aa14.82□□□□□ -0.04
SRRT-213ENST00000611405 FKBP5Q13451 457 aaPredicted RBP14.82□□□□□ -0.04
SRRT-213ENST00000611405 AKAP4Q5JQC9 854 aa14.82□□□□□ -0.04
SRRT-213ENST00000611405 TBC1D9Q6ZT07 1266 aa14.82□□□□□ -0.04
SRRT-213ENST00000611405 KRT28Q7Z3Y7 464 aa14.82□□□□□ -0.04
SRRT-213ENST00000611405 GNAI3P08754 354 aa14.81□□□□□ -0.04
SRRT-213ENST00000611405 ANTXR1Q9H6X2 564 aa14.81□□□□□ -0.04
SRRT-213ENST00000611405 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
SRRT-213ENST00000611405 KIF1AQ12756 1690 aa14.81□□□□□ -0.04
SRRT-213ENST00000611405 C1orf167Q5SNV9 1468 aa14.81□□□□□ -0.04
SRRT-213ENST00000611405 HOXB7P09629 217 aa14.81□□□□□ -0.04
SRRT-213ENST00000611405 MED1Q15648 1581 aaPredicted RBP14.81□□□□□ -0.04
SRRT-213ENST00000611405 MST1RQ04912 1400 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms