RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 LIG1P18858 919 aa20.62■□□□□ 0.89
CDK11B-205ENST00000611150 PDE3AQ14432 1141 aa20.62■□□□□ 0.89
CDK11B-205ENST00000611150 PPP2R5AQ15172 486 aa20.62■□□□□ 0.89
CDK11B-205ENST00000611150 LRRFIP2Q9Y608 721 aaKnown RBP20.62■□□□□ 0.89
CDK11B-205ENST00000611150 PRPF40AO75400 957 aaKnown RBP20.61■□□□□ 0.89
CDK11B-205ENST00000611150 MAGEA9P43362 315 aa20.61■□□□□ 0.89
CDK11B-205ENST00000611150 E2F4Q16254 413 aa20.61■□□□□ 0.89
CDK11B-205ENST00000611150 C11orf91Q3C1V1 193 aa20.61■□□□□ 0.89
CDK11B-205ENST00000611150 SLFNL1Q499Z3 407 aa20.61■□□□□ 0.89
CDK11B-205ENST00000611150 PACS2Q86VP3 889 aa20.61■□□□□ 0.89
CDK11B-205ENST00000611150 RABEP1Q15276 862 aa20.6■□□□□ 0.89
CDK11B-205ENST00000611150 PRDM16Q9HAZ2 1276 aa20.6■□□□□ 0.89
CDK11B-205ENST00000611150 CEP89Q96ST8 783 aa20.6■□□□□ 0.89
CDK11B-205ENST00000611150 MBD3O95983 291 aa20.59■□□□□ 0.89
CDK11B-205ENST00000611150 TPM4P67936 248 aa20.59■□□□□ 0.89
CDK11B-205ENST00000611150 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.59■□□□□ 0.89
CDK11B-205ENST00000611150 PLEKHG2Q9H7P9 1386 aa20.59■□□□□ 0.89
CDK11B-205ENST00000611150 BORCS6Q96GS4 357 aa20.59■□□□□ 0.89
CDK11B-205ENST00000611150 ADCY5O95622 1261 aa20.58■□□□□ 0.89
CDK11B-205ENST00000611150 H0YHG0 523 aa20.58■□□□□ 0.88
CDK11B-205ENST00000611150 SARNPP82979 210 aaKnown RBP20.58■□□□□ 0.88
CDK11B-205ENST00000611150 GOLGA2Q08379 1002 aa20.58■□□□□ 0.88
CDK11B-205ENST00000611150 NAA30Q147X3 362 aaPredicted RBP20.58■□□□□ 0.88
CDK11B-205ENST00000611150 CASC1Q6TDU7 716 aa20.58■□□□□ 0.88
CDK11B-205ENST00000611150 NAIPQ13075 1403 aa20.57■□□□□ 0.88
CDK11B-205ENST00000611150 HTATSF1O43719 755 aaKnown RBP20.57■□□□□ 0.88
CDK11B-205ENST00000611150 PUS7Q96PZ0 661 aaKnown RBP20.57■□□□□ 0.88
CDK11B-205ENST00000611150 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
CDK11B-205ENST00000611150 GOLGA5Q8TBA6 731 aa20.56■□□□□ 0.88
CDK11B-205ENST00000611150 TBC1D22AQ8WUA7 517 aa20.56■□□□□ 0.88
CDK11B-205ENST00000611150 USP25Q9UHP3 1055 aa20.56■□□□□ 0.88
CDK11B-205ENST00000611150 ARAP3Q8WWN8 1544 aa20.56■□□□□ 0.88
CDK11B-205ENST00000611150 MAP9Q49MG5 647 aa20.56■□□□□ 0.88
CDK11B-205ENST00000611150 SYAP1Q96A49 352 aaPredicted RBP20.56■□□□□ 0.88
CDK11B-205ENST00000611150 NBPF3Q9H094 633 aa20.56■□□□□ 0.88
CDK11B-205ENST00000611150 FBXO18Q8NFZ0 1043 aa20.55■□□□□ 0.88
CDK11B-205ENST00000611150 PPM1EQ8WY54 764 aa20.55■□□□□ 0.88
CDK11B-205ENST00000611150 PYCARDQ9ULZ3 195 aa20.55■□□□□ 0.88
CDK11B-205ENST00000611150 FBXO38Q6PIJ6 1188 aa20.54■□□□□ 0.88
CDK11B-205ENST00000611150 ZNF513Q8N8E2 541 aaPredicted RBP20.54■□□□□ 0.88
CDK11B-205ENST00000611150 GAS2L2Q8NHY3 880 aa20.54■□□□□ 0.88
CDK11B-205ENST00000611150 USP47Q96K76 1375 aa20.54■□□□□ 0.88
CDK11B-205ENST00000611150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.88
CDK11B-205ENST00000611150 FAM210AQ96ND0 272 aa20.54■□□□□ 0.88
CDK11B-205ENST00000611150 PARD3Q8TEW0 1356 aa20.54■□□□□ 0.88
CDK11B-205ENST00000611150 NEO1Q92859 1461 aa20.54■□□□□ 0.88
CDK11B-205ENST00000611150 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
CDK11B-205ENST00000611150 V9GYY5 206 aaPredicted RBP20.53■□□□□ 0.88
CDK11B-205ENST00000611150 CASKIN1Q8WXD9 1431 aa20.52■□□□□ 0.88
CDK11B-205ENST00000611150 KANK1Q14678 1352 aa20.52■□□□□ 0.88
CDK11B-205ENST00000611150 RNF20Q5VTR2 975 aa20.52■□□□□ 0.88
CDK11B-205ENST00000611150 MMS22LQ6ZRQ5 1243 aa20.52■□□□□ 0.88
CDK11B-205ENST00000611150 GTF3C6Q969F1 213 aa20.52■□□□□ 0.88
CDK11B-205ENST00000611150 LRRIQ1Q96JM4 1722 aa20.51■□□□□ 0.87
CDK11B-205ENST00000611150 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
CDK11B-205ENST00000611150 ANKRD30AQ9BXX3 1397 aa20.51■□□□□ 0.87
CDK11B-205ENST00000611150 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
CDK11B-205ENST00000611150 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
CDK11B-205ENST00000611150 ANKRD36BQ8N2N9 1353 aa20.5■□□□□ 0.87
CDK11B-205ENST00000611150 MAFGO15525 162 aa20.5■□□□□ 0.87
CDK11B-205ENST00000611150 PTPRCP08575 1304 aa20.5■□□□□ 0.87
CDK11B-205ENST00000611150 BCAR3O75815 825 aa20.5■□□□□ 0.87
CDK11B-205ENST00000611150 ZC3H12AQ5D1E8 599 aaKnown RBP20.49■□□□□ 0.87
CDK11B-205ENST00000611150 KCNF1Q9H3M0 494 aa20.49■□□□□ 0.87
CDK11B-205ENST00000611150 COG6Q9Y2V7 657 aa20.49■□□□□ 0.87
CDK11B-205ENST00000611150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.49■□□□□ 0.87
CDK11B-205ENST00000611150 PAIP2Q9BPZ3 127 aaKnown RBP20.48■□□□□ 0.87
CDK11B-205ENST00000611150 KDM4FA0A1W2PPD8 638 aa20.48■□□□□ 0.87
CDK11B-205ENST00000611150 SLFN5Q08AF3 891 aa20.48■□□□□ 0.87
CDK11B-205ENST00000611150 IQUBQ8NA54 791 aa20.48■□□□□ 0.87
CDK11B-205ENST00000611150 AK7Q96M32 723 aa20.48■□□□□ 0.87
CDK11B-205ENST00000611150 CD2BP2O95400 341 aaKnown RBP20.47■□□□□ 0.87
CDK11B-205ENST00000611150 RTF1Q92541 710 aaKnown RBP20.47■□□□□ 0.87
CDK11B-205ENST00000611150 C16orf45Q96MC5 204 aaPredicted RBP20.47■□□□□ 0.87
CDK11B-205ENST00000611150 KIF2CQ99661 725 aa20.47■□□□□ 0.87
CDK11B-205ENST00000611150 TROQ12816 1431 aaPredicted RBP20.47■□□□□ 0.87
CDK11B-205ENST00000611150 CTAGE5O15320 804 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 SMARCE1Q969G3 411 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 ERO1AQ96HE7 468 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 FHOD1Q9Y613 1164 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 ZNF521Q96K83 1311 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 CFAP74Q9C0B2 1584 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 NKTRP30414 1462 aaKnown RBP20.46■□□□□ 0.87
CDK11B-205ENST00000611150 FYCO1Q9BQS8 1478 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 IVLP07476 585 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 FANCAO15360 1455 aa20.46■□□□□ 0.87
CDK11B-205ENST00000611150 DENND4BO75064 1496 aaPredicted RBP20.46■□□□□ 0.87
CDK11B-205ENST00000611150 IPO7O95373 1038 aaKnown RBP20.45■□□□□ 0.86
CDK11B-205ENST00000611150 TACO1Q9BSH4 297 aaKnown RBP20.45■□□□□ 0.86
CDK11B-205ENST00000611150 RPRD2Q5VT52 1461 aaKnown RBP20.45■□□□□ 0.86
CDK11B-205ENST00000611150 CWC22Q9HCG8 908 aaKnown RBP20.45■□□□□ 0.86
CDK11B-205ENST00000611150 ZNF526Q8TF50 670 aaPredicted RBP20.44■□□□□ 0.86
CDK11B-205ENST00000611150 POLR3GO15318 223 aaPredicted RBP20.44■□□□□ 0.86
CDK11B-205ENST00000611150 KDM4AO75164 1064 aa20.44■□□□□ 0.86
CDK11B-205ENST00000611150 RAPGEF3O95398 923 aa20.44■□□□□ 0.86
CDK11B-205ENST00000611150 KIF14Q15058 1648 aa20.44■□□□□ 0.86
CDK11B-205ENST00000611150 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
CDK11B-205ENST00000611150 TPM1P09493 284 aa20.43■□□□□ 0.86
CDK11B-205ENST00000611150 NUCKS1Q9H1E3 243 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms