RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 TPM2P07951 284 aa20.12■□□□□ 0.81
RTN1-209ENST00000611068 SBNO1A3KN83 1393 aa20.11■□□□□ 0.81
RTN1-209ENST00000611068 ESPNB1AK53 854 aa20.11■□□□□ 0.81
RTN1-209ENST00000611068 ZC3H6P61129 1189 aaKnown RBP20.11■□□□□ 0.81
RTN1-209ENST00000611068 FAM161AQ3B820 660 aa20.11■□□□□ 0.81
RTN1-209ENST00000611068 GZF1Q9H116 711 aaPredicted RBP20.11■□□□□ 0.81
RTN1-209ENST00000611068 SLKQ9H2G2 1235 aaPredicted RBP20.1■□□□□ 0.81
RTN1-209ENST00000611068 NWD1Q149M9 1564 aa20.1■□□□□ 0.81
RTN1-209ENST00000611068 GCP02774 474 aa20.09■□□□□ 0.81
RTN1-209ENST00000611068 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
RTN1-209ENST00000611068 LRRC59Q96AG4 307 aaKnown RBP20.09■□□□□ 0.81
RTN1-209ENST00000611068 MIS18AQ9NYP9 233 aa20.09■□□□□ 0.81
RTN1-209ENST00000611068 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.08■□□□□ 0.81
RTN1-209ENST00000611068 COG6Q9Y2V7 657 aa20.08■□□□□ 0.8
RTN1-209ENST00000611068 MTHFSDQ2M296 383 aaKnown RBP20.07■□□□□ 0.8
RTN1-209ENST00000611068 TSPYL6Q8N831 410 aa20.06■□□□□ 0.8
RTN1-209ENST00000611068 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
RTN1-209ENST00000611068 BBXQ8WY36 941 aaPredicted RBP20.06■□□□□ 0.8
RTN1-209ENST00000611068 ZHX1Q9UKY1 873 aaPredicted RBP20.06■□□□□ 0.8
RTN1-209ENST00000611068 STRCQ7RTU9 1775 aa20.05■□□□□ 0.8
RTN1-209ENST00000611068 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
RTN1-209ENST00000611068 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
RTN1-209ENST00000611068 MST1RQ04912 1400 aa20.05■□□□□ 0.8
RTN1-209ENST00000611068 MSH6P52701 1360 aa20.05■□□□□ 0.8
RTN1-209ENST00000611068 RLBP1P12271 317 aa20.05■□□□□ 0.8
RTN1-209ENST00000611068 KRT24Q2M2I5 525 aa20.05■□□□□ 0.8
RTN1-209ENST00000611068 MARF1Q9Y4F3 1742 aaKnown RBP20.04■□□□□ 0.8
RTN1-209ENST00000611068 NBPF6Q5VWK0 638 aa20.04■□□□□ 0.8
RTN1-209ENST00000611068 SSH1Q8WYL5 1049 aa20.04■□□□□ 0.8
RTN1-209ENST00000611068 NBPF4Q96M43 638 aa20.04■□□□□ 0.8
RTN1-209ENST00000611068 AXIN2Q9Y2T1 843 aa20.04■□□□□ 0.8
RTN1-209ENST00000611068 KIAA1211Q6ZU35 1233 aa20.04■□□□□ 0.8
RTN1-209ENST00000611068 IP6K1Q92551 441 aa20.02■□□□□ 0.8
RTN1-209ENST00000611068 KDM2BQ8NHM5 1336 aa20.01■□□□□ 0.79
RTN1-209ENST00000611068 GTF2E1P29083 439 aaPredicted RBP20.01■□□□□ 0.79
RTN1-209ENST00000611068 KCNH5Q8NCM2 988 aa20.01■□□□□ 0.79
RTN1-209ENST00000611068 IGSF1Q8N6C5 1336 aa20.01■□□□□ 0.79
RTN1-209ENST00000611068 CHRNA2Q15822 529 aa20.01■□□□□ 0.79
RTN1-209ENST00000611068 C8orf58Q8NAV2 365 aa20■□□□□ 0.79
RTN1-209ENST00000611068 BRINP3Q76B58 766 aa20■□□□□ 0.79
RTN1-209ENST00000611068 IL16Q14005 1332 aa19.99■□□□□ 0.79
RTN1-209ENST00000611068 DLG5Q8TDM6 1919 aa19.99■□□□□ 0.79
RTN1-209ENST00000611068 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
RTN1-209ENST00000611068 SLAIN2Q9P270 581 aa19.99■□□□□ 0.79
RTN1-209ENST00000611068 NOB1Q9ULX3 412 aaKnown RBP19.99■□□□□ 0.79
RTN1-209ENST00000611068 ARHGEF10O15013 1369 aa19.98■□□□□ 0.79
RTN1-209ENST00000611068 GNAI1P63096 354 aa19.98■□□□□ 0.79
RTN1-209ENST00000611068 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
RTN1-209ENST00000611068 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
RTN1-209ENST00000611068 ARID3AQ99856 593 aa19.98■□□□□ 0.79
RTN1-209ENST00000611068 LMOD3Q0VAK6 560 aa19.97■□□□□ 0.79
RTN1-209ENST00000611068 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
RTN1-209ENST00000611068 PRDM10Q9NQV6 1147 aa19.97■□□□□ 0.79
RTN1-209ENST00000611068 IFT57Q9NWB7 429 aa19.97■□□□□ 0.79
RTN1-209ENST00000611068 USP19O94966 1318 aa19.97■□□□□ 0.79
RTN1-209ENST00000611068 LTN1O94822 1766 aa19.96■□□□□ 0.79
RTN1-209ENST00000611068 ANTXR1Q9H6X2 564 aa19.96■□□□□ 0.79
RTN1-209ENST00000611068 NAP1L2Q9ULW6 460 aaPredicted RBP19.96■□□□□ 0.79
RTN1-209ENST00000611068 ANKRD24Q8TF21 1146 aa19.96■□□□□ 0.79
RTN1-209ENST00000611068 CHMP4BQ9H444 224 aaKnown RBP19.96■□□□□ 0.79
RTN1-209ENST00000611068 FAM13BQ9NYF5 915 aa19.95■□□□□ 0.78
RTN1-209ENST00000611068 NPHP3Q7Z494 1330 aa19.95■□□□□ 0.78
RTN1-209ENST00000611068 NFAT5O94916 1531 aa19.95■□□□□ 0.78
RTN1-209ENST00000611068 ZNF853P0CG23 659 aa19.95■□□□□ 0.78
RTN1-209ENST00000611068 MRE11P49959 708 aa19.95■□□□□ 0.78
RTN1-209ENST00000611068 FTSJ3Q8IY81 847 aaKnown RBP19.95■□□□□ 0.78
RTN1-209ENST00000611068 VAMP4O75379 141 aa19.94■□□□□ 0.78
RTN1-209ENST00000611068 TWISTNBQ3B726 338 aaPredicted RBP19.94■□□□□ 0.78
RTN1-209ENST00000611068 RGPD1P0DJD0 1748 aa19.94■□□□□ 0.78
RTN1-209ENST00000611068 TRIM27P14373 513 aa19.93■□□□□ 0.78
RTN1-209ENST00000611068 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
RTN1-209ENST00000611068 KDRP35968 1356 aa19.93■□□□□ 0.78
RTN1-209ENST00000611068 SMAP1Q8IYB5 467 aaPredicted RBP19.92■□□□□ 0.78
RTN1-209ENST00000611068 GRPEL1Q9HAV7 217 aa19.92■□□□□ 0.78
RTN1-209ENST00000611068 PDE3AQ14432 1141 aa19.92■□□□□ 0.78
RTN1-209ENST00000611068 XIRP1Q702N8 1843 aaKnown RBP19.92■□□□□ 0.78
RTN1-209ENST00000611068 NECTIN2Q92692 538 aa19.91■□□□□ 0.78
RTN1-209ENST00000611068 NLRP2Q9NX02 1062 aa19.91■□□□□ 0.78
RTN1-209ENST00000611068 CENPQQ7L2Z9 268 aaPredicted RBP19.9■□□□□ 0.78
RTN1-209ENST00000611068 DZIP1LQ8IYY4 767 aaKnown RBP19.9■□□□□ 0.78
RTN1-209ENST00000611068 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
RTN1-209ENST00000611068 CSB-PGBD3P0DP91 1061 aa19.9■□□□□ 0.78
RTN1-209ENST00000611068 ITPRIPQ8IWB1 547 aa19.9■□□□□ 0.78
RTN1-209ENST00000611068 IL17REQ8NFR9 667 aa19.9■□□□□ 0.78
RTN1-209ENST00000611068 TRIM44Q96DX7 344 aaPredicted RBP19.9■□□□□ 0.78
RTN1-209ENST00000611068 TSPYL4Q9UJ04 414 aa19.9■□□□□ 0.78
RTN1-209ENST00000611068 TRPM3Q9HCF6 1732 aaPredicted RBP19.9■□□□□ 0.78
RTN1-209ENST00000611068 GNAT3A8MTJ3 354 aa19.89■□□□□ 0.78
RTN1-209ENST00000611068 IGHDP01880 384 aa19.89■□□□□ 0.78
RTN1-209ENST00000611068 HAP1P54257 671 aaPredicted RBP19.89■□□□□ 0.78
RTN1-209ENST00000611068 RGPD2P0DJD1 1756 aa19.89■□□□□ 0.78
RTN1-209ENST00000611068 SEC24BO95487 1268 aa19.89■□□□□ 0.77
RTN1-209ENST00000611068 LGR6Q9HBX8 967 aa19.89■□□□□ 0.77
RTN1-209ENST00000611068 SPATA31A3Q5VYP0 1347 aa19.88■□□□□ 0.77
RTN1-209ENST00000611068 DCCP43146 1447 aa19.88■□□□□ 0.77
RTN1-209ENST00000611068 CHL1O00533 1208 aa19.88■□□□□ 0.77
RTN1-209ENST00000611068 MCM4P33991 863 aa19.88■□□□□ 0.77
RTN1-209ENST00000611068 ATF7IPQ6VMQ6 1270 aa19.88■□□□□ 0.77
RTN1-209ENST00000611068 MED1Q15648 1581 aaPredicted RBP19.88■□□□□ 0.77
RTN1-209ENST00000611068 RTL1A6NKG5 1358 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms