RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
PCDHB16-201ENST00000609684 PDRG1Q9NUG6 133 aa16.97■□□□□ 0.31
PCDHB16-201ENST00000609684 CEP126Q9P2H0 1117 aa16.97■□□□□ 0.31
PCDHB16-201ENST00000609684 KDM5BQ9UGL1 1544 aa16.97■□□□□ 0.31
PCDHB16-201ENST00000609684 TNNT3P45378 269 aaPredicted RBP16.97■□□□□ 0.31
PCDHB16-201ENST00000609684 CCDC173Q0VFZ6 552 aa16.97■□□□□ 0.31
PCDHB16-201ENST00000609684 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
PCDHB16-201ENST00000609684 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
PCDHB16-201ENST00000609684 KRT85P78386 507 aa16.96■□□□□ 0.31
PCDHB16-201ENST00000609684 GPS2Q13227 327 aa16.96■□□□□ 0.31
PCDHB16-201ENST00000609684 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
PCDHB16-201ENST00000609684 GRPEL1Q9HAV7 217 aa16.95■□□□□ 0.3
PCDHB16-201ENST00000609684 PHF8Q9UPP1 1060 aa16.95■□□□□ 0.3
PCDHB16-201ENST00000609684 PDILTQ8N807 584 aa16.95■□□□□ 0.3
PCDHB16-201ENST00000609684 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
PCDHB16-201ENST00000609684 IL27Q8NEV9 243 aa16.95■□□□□ 0.3
PCDHB16-201ENST00000609684 MPHOSPH8Q99549 860 aa16.95■□□□□ 0.3
PCDHB16-201ENST00000609684 ANO8Q9HCE9 1232 aaPredicted RBP16.94■□□□□ 0.3
PCDHB16-201ENST00000609684 CCDC85AQ96PX6 553 aaPredicted RBP16.94■□□□□ 0.3
PCDHB16-201ENST00000609684 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
PCDHB16-201ENST00000609684 MNS1Q8NEH6 495 aa16.94■□□□□ 0.3
PCDHB16-201ENST00000609684 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
PCDHB16-201ENST00000609684 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 SMC2O95347 1197 aa16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 ZSCAN31Q96LW9 406 aaPredicted RBP16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 PLCH2O75038 1416 aa16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 FOXO3O43524 673 aa16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 GLRX3O76003 335 aaKnown RBP16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 SLC3A2P08195 630 aaKnown RBP16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 CCDC192P0DO97 292 aa16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 ME1P48163 572 aa16.93■□□□□ 0.3
PCDHB16-201ENST00000609684 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 FBLN1P23142 703 aa16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 FAM83GA6ND36 823 aa16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 CASTP20810 708 aaKnown RBP16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 TNMDQ9H2S6 317 aa16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 NUTM2BA6NNL0 878 aaPredicted RBP16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 NUTM2EB1AL46 878 aaPredicted RBP16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 IGHDP01880 384 aa16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 NUTM2AQ8IVF1 878 aaPredicted RBP16.92■□□□□ 0.3
PCDHB16-201ENST00000609684 PTCD1O75127 700 aaKnown RBP16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 JMYQ8N9B5 988 aa16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 SPC24Q8NBT2 197 aa16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 CCDC43Q96MW1 224 aaKnown RBP16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 LRRFIP2Q9Y608 721 aaKnown RBP16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 KRT32Q14532 448 aa16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 ZSCAN25Q6NSZ9 544 aa16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 LARP1Q6PKG0 1096 aaKnown RBP16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 MBIPQ9NS73 344 aa16.91■□□□□ 0.3
PCDHB16-201ENST00000609684 TRIM22Q8IYM9 498 aa16.9■□□□□ 0.3
PCDHB16-201ENST00000609684 MPNDQ8N594 471 aa16.9■□□□□ 0.3
PCDHB16-201ENST00000609684 FLIIQ13045 1269 aa16.9■□□□□ 0.3
PCDHB16-201ENST00000609684 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
PCDHB16-201ENST00000609684 DNAAF4Q8WXU2 420 aa16.9■□□□□ 0.3
PCDHB16-201ENST00000609684 ITSN2Q9NZM3 1697 aa16.9■□□□□ 0.3
PCDHB16-201ENST00000609684 CTNNA3Q9UI47 895 aa16.89■□□□□ 0.29
PCDHB16-201ENST00000609684 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
PCDHB16-201ENST00000609684 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
PCDHB16-201ENST00000609684 TBC1D2Q9BYX2 928 aa16.89■□□□□ 0.29
PCDHB16-201ENST00000609684 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
PCDHB16-201ENST00000609684 SPATA32Q96LK8 384 aa16.89■□□□□ 0.29
PCDHB16-201ENST00000609684 MYD88Q99836 296 aa16.89■□□□□ 0.29
PCDHB16-201ENST00000609684 PTPRCP08575 1304 aa16.89■□□□□ 0.29
PCDHB16-201ENST00000609684 ASXL1Q8IXJ9 1541 aa16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 ACEP12821 1306 aa16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 IL16Q14005 1332 aa16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 PRPF40BQ6NWY9 871 aaKnown RBP16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 BOLA2Q9H3K6 86 aa16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 TCOF1Q13428 1488 aaKnown RBP16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 NUP160Q12769 1436 aa16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 CCDC69A6NI79 296 aa16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 ZNF771Q7L3S4 317 aaPredicted RBP16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 NAP1L1P55209 391 aaKnown RBP16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 NUP133Q8WUM0 1156 aa16.88■□□□□ 0.29
PCDHB16-201ENST00000609684 ARGLU1Q9NWB6 273 aaPredicted RBP16.87■□□□□ 0.29
PCDHB16-201ENST00000609684 CTTNBP2Q8WZ74 1663 aa16.87■□□□□ 0.29
PCDHB16-201ENST00000609684 IDH1O75874 414 aaKnown RBP16.87■□□□□ 0.29
PCDHB16-201ENST00000609684 TXLNAP40222 546 aa16.87■□□□□ 0.29
PCDHB16-201ENST00000609684 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
PCDHB16-201ENST00000609684 STARD3NLO95772 234 aa16.86■□□□□ 0.29
PCDHB16-201ENST00000609684 CCDC83Q8IWF9 413 aa16.86■□□□□ 0.29
PCDHB16-201ENST00000609684 DDX11Q96FC9 970 aa16.86■□□□□ 0.29
PCDHB16-201ENST00000609684 FERMT3Q86UX7 667 aa16.86■□□□□ 0.29
PCDHB16-201ENST00000609684 TDO2P48775 406 aa16.85■□□□□ 0.29
PCDHB16-201ENST00000609684 TESK2Q96S53 571 aa16.85■□□□□ 0.29
PCDHB16-201ENST00000609684 BMP2KLQ5H9B9 411 aa16.85■□□□□ 0.29
PCDHB16-201ENST00000609684 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
PCDHB16-201ENST00000609684 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
PCDHB16-201ENST00000609684 CFAP45Q9UL16 551 aa16.85■□□□□ 0.29
PCDHB16-201ENST00000609684 NUP62CLQ9H1M0 184 aa16.85■□□□□ 0.29
PCDHB16-201ENST00000609684 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms