RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 FAM50AQ14320 339 aaKnown RBP8.53□□□□□ -1.04
LINC00649-213ENST00000608431 C16orf71Q8IYS4 520 aaPredicted RBP8.53□□□□□ -1.04
LINC00649-213ENST00000608431 NGDNQ8NEJ9 315 aaKnown RBP8.53□□□□□ -1.04
LINC00649-213ENST00000608431 TRPM1Q7Z4N2 1603 aa8.52□□□□□ -1.05
LINC00649-213ENST00000608431 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.05
LINC00649-213ENST00000608431 HTRA3P83110 453 aa8.52□□□□□ -1.05
LINC00649-213ENST00000608431 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
LINC00649-213ENST00000608431 MARCH10Q8NA82 808 aaPredicted RBP8.52□□□□□ -1.05
LINC00649-213ENST00000608431 BBXQ8WY36 941 aaPredicted RBP8.52□□□□□ -1.05
LINC00649-213ENST00000608431 ZNF827Q17R98 1081 aa8.51□□□□□ -1.05
LINC00649-213ENST00000608431 TMEM132EQ6IEE7 984 aa8.51□□□□□ -1.05
LINC00649-213ENST00000608431 PIP4P2Q8N4L2 257 aa8.51□□□□□ -1.05
LINC00649-213ENST00000608431 CD2APQ9Y5K6 639 aa8.51□□□□□ -1.05
LINC00649-213ENST00000608431 CICQ96RK0 1608 aaPredicted RBP8.51□□□□□ -1.05
LINC00649-213ENST00000608431 TNRC6CQ9HCJ0 1690 aaKnown RBP8.5□□□□□ -1.05
LINC00649-213ENST00000608431 RGPD5Q99666 1765 aa8.5□□□□□ -1.05
LINC00649-213ENST00000608431 CENPBP07199 599 aaPredicted RBP8.49□□□□□ -1.05
LINC00649-213ENST00000608431 MLLT1Q03111 559 aaPredicted RBP8.49□□□□□ -1.05
LINC00649-213ENST00000608431 NEUROD1Q13562 356 aa8.49□□□□□ -1.05
LINC00649-213ENST00000608431 TFCP2L1Q9NZI6 479 aa8.49□□□□□ -1.05
LINC00649-213ENST00000608431 PNPLA7Q6ZV29 1317 aa8.49□□□□□ -1.05
LINC00649-213ENST00000608431 ADGRF5Q8IZF2 1346 aa8.49□□□□□ -1.05
LINC00649-213ENST00000608431 SLC27A3Q5K4L6 730 aa8.48□□□□□ -1.05
LINC00649-213ENST00000608431 PKD1L3Q7Z443 1732 aa8.48□□□□□ -1.05
LINC00649-213ENST00000608431 USP19O94966 1318 aa8.48□□□□□ -1.05
LINC00649-213ENST00000608431 PIK3C2GO75747 1445 aa8.47□□□□□ -1.05
LINC00649-213ENST00000608431 LY75O60449 1722 aa8.47□□□□□ -1.05
LINC00649-213ENST00000608431 EXOC5O00471 708 aa8.47□□□□□ -1.05
LINC00649-213ENST00000608431 RIOK3O14730 519 aaKnown RBP8.47□□□□□ -1.05
LINC00649-213ENST00000608431 PYGBP11216 843 aa8.47□□□□□ -1.05
LINC00649-213ENST00000608431 SAFB2Q14151 953 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC00649-213ENST00000608431 TOM1L2Q6ZVM7 507 aa8.47□□□□□ -1.05
LINC00649-213ENST00000608431 PRAM1Q96QH2 718 aa8.47□□□□□ -1.05
LINC00649-213ENST00000608431 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
LINC00649-213ENST00000608431 POGKQ9P215 609 aa8.47□□□□□ -1.05
LINC00649-213ENST00000608431 NUTM2GQ5VZR2 741 aa8.46□□□□□ -1.06
LINC00649-213ENST00000608431 HS6ST3Q8IZP7 471 aa8.46□□□□□ -1.06
LINC00649-213ENST00000608431 HIRIP3Q9BW71 556 aaPredicted RBP8.46□□□□□ -1.06
LINC00649-213ENST00000608431 TSPYL2Q9H2G4 693 aaPredicted RBP8.46□□□□□ -1.06
LINC00649-213ENST00000608431 NMRK2Q9NPI5 230 aa8.46□□□□□ -1.06
LINC00649-213ENST00000608431 LRRC4BQ9NT99 713 aa8.46□□□□□ -1.06
LINC00649-213ENST00000608431 USP6P35125 1406 aa8.46□□□□□ -1.06
LINC00649-213ENST00000608431 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
LINC00649-213ENST00000608431 COL18A1P39060 1754 aa8.45□□□□□ -1.06
LINC00649-213ENST00000608431 PRR36Q9H6K5 1346 aa8.45□□□□□ -1.06
LINC00649-213ENST00000608431 ABCC6O95255 1503 aa8.44□□□□□ -1.06
LINC00649-213ENST00000608431 NLRP13Q86W25 1043 aa8.44□□□□□ -1.06
LINC00649-213ENST00000608431 ABTB2Q8N961 1025 aa8.44□□□□□ -1.06
LINC00649-213ENST00000608431 SMC1BQ8NDV3 1235 aa8.44□□□□□ -1.06
LINC00649-213ENST00000608431 WDR17Q8IZU2 1322 aa8.44□□□□□ -1.06
LINC00649-213ENST00000608431 IGSF1Q8N6C5 1336 aa8.44□□□□□ -1.06
LINC00649-213ENST00000608431 PLEKHG2Q9H7P9 1386 aa8.44□□□□□ -1.06
LINC00649-213ENST00000608431 ARFGEF1Q9Y6D6 1849 aa8.43□□□□□ -1.06
LINC00649-213ENST00000608431 GCP02774 474 aa8.43□□□□□ -1.06
LINC00649-213ENST00000608431 RGS19P49795 217 aa8.43□□□□□ -1.06
LINC00649-213ENST00000608431 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.43□□□□□ -1.06
LINC00649-213ENST00000608431 GTF3C3Q9Y5Q9 886 aa8.43□□□□□ -1.06
LINC00649-213ENST00000608431 CCDC61Q9Y6R9 512 aa8.43□□□□□ -1.06
LINC00649-213ENST00000608431 KDM2BQ8NHM5 1336 aa8.43□□□□□ -1.06
LINC00649-213ENST00000608431 KIF13BQ9NQT8 1826 aa8.43□□□□□ -1.06
LINC00649-213ENST00000608431 WASLO00401 505 aaPredicted RBP8.42□□□□□ -1.06
LINC00649-213ENST00000608431 PAXIP1Q6ZW49 1069 aaPredicted RBP8.42□□□□□ -1.06
LINC00649-213ENST00000608431 ACSBG1Q96GR2 724 aa8.42□□□□□ -1.06
LINC00649-213ENST00000608431 TAF1LQ8IZX4 1826 aa8.42□□□□□ -1.06
LINC00649-213ENST00000608431 SBF1O95248 1867 aa8.42□□□□□ -1.06
LINC00649-213ENST00000608431 BRCA1P38398 1863 aaKnown RBP8.41□□□□□ -1.06
LINC00649-213ENST00000608431 USP54Q70EL1 1684 aa8.41□□□□□ -1.06
LINC00649-213ENST00000608431 PXDNLA1KZ92 1463 aa8.41□□□□□ -1.06
LINC00649-213ENST00000608431 CCDC7Q96M83 1385 aa8.41□□□□□ -1.06
LINC00649-213ENST00000608431 NKX1-1Q15270 411 aaPredicted RBP8.41□□□□□ -1.06
LINC00649-213ENST00000608431 ABHD8Q96I13 439 aa8.41□□□□□ -1.06
LINC00649-213ENST00000608431 CARD10Q9BWT7 1032 aa8.41□□□□□ -1.06
LINC00649-213ENST00000608431 C14orf93Q9H972 538 aaKnown RBP8.41□□□□□ -1.06
LINC00649-213ENST00000608431 N4BP2Q86UW6 1770 aaPredicted RBP8.4□□□□□ -1.06
LINC00649-213ENST00000608431 C5P01031 1676 aa8.4□□□□□ -1.06
LINC00649-213ENST00000608431 QRICH2Q9H0J4 1663 aa8.4□□□□□ -1.06
LINC00649-213ENST00000608431 POLR3AO14802 1390 aaPredicted RBP8.4□□□□□ -1.06
LINC00649-213ENST00000608431 MINK1Q8N4C8 1332 aaPredicted RBP8.4□□□□□ -1.06
LINC00649-213ENST00000608431 ZBTB7CA1YPR0 619 aa8.4□□□□□ -1.06
LINC00649-213ENST00000608431 HMGB2P26583 209 aaKnown RBP8.4□□□□□ -1.06
LINC00649-213ENST00000608431 CTCFP49711 727 aaPredicted RBP8.4□□□□□ -1.06
LINC00649-213ENST00000608431 VIRMAQ69YN4 1812 aaKnown RBP8.4□□□□□ -1.07
LINC00649-213ENST00000608431 RGL3Q3MIN7 710 aa8.39□□□□□ -1.07
LINC00649-213ENST00000608431 DIEXFQ68CQ4 756 aaKnown RBP8.39□□□□□ -1.07
LINC00649-213ENST00000608431 MSL1Q68DK7 614 aa8.39□□□□□ -1.07
LINC00649-213ENST00000608431 FLAD1Q8NFF5 587 aa8.39□□□□□ -1.07
LINC00649-213ENST00000608431 AIDAQ96BJ3 306 aa8.39□□□□□ -1.07
LINC00649-213ENST00000608431 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
LINC00649-213ENST00000608431 SPATA31E1Q6ZUB1 1445 aa8.38□□□□□ -1.07
LINC00649-213ENST00000608431 FOXN1O15353 648 aa8.38□□□□□ -1.07
LINC00649-213ENST00000608431 COL23A1Q86Y22 540 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-213ENST00000608431 NUDT16Q96DE0 195 aaKnown RBP8.38□□□□□ -1.07
LINC00649-213ENST00000608431 SLIT3O75094 1523 aa8.38□□□□□ -1.07
LINC00649-213ENST00000608431 KCPQ6ZWJ8 1503 aa8.38□□□□□ -1.07
LINC00649-213ENST00000608431 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
LINC00649-213ENST00000608431 DOT1LQ8TEK3 1739 aa8.37□□□□□ -1.07
LINC00649-213ENST00000608431 KIAA1551Q9HCM1 1747 aa8.37□□□□□ -1.07
LINC00649-213ENST00000608431 ACEP12821 1306 aa8.37□□□□□ -1.07
LINC00649-213ENST00000608431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.37□□□□□ -1.07
LINC00649-213ENST00000608431 CSB-PGBD3P0DP91 1061 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms