RNA–Protein interactions for RNA: ENST00000607931.1

LINC00963-209, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 473 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-209ENST00000607931 USP31Q70CQ4 1352 aa11.85□□□□□ -0.51
LINC00963-209ENST00000607931 SLC27A3Q5K4L6 730 aa11.85□□□□□ -0.51
LINC00963-209ENST00000607931 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
LINC00963-209ENST00000607931 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
LINC00963-209ENST00000607931 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
LINC00963-209ENST00000607931 TFCP2L1Q9NZI6 479 aa11.84□□□□□ -0.51
LINC00963-209ENST00000607931 RGPD5Q99666 1765 aa11.84□□□□□ -0.51
LINC00963-209ENST00000607931 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-209ENST00000607931 NEUROD1Q13562 356 aa11.83□□□□□ -0.52
LINC00963-209ENST00000607931 NME9Q86XW9 330 aa11.83□□□□□ -0.52
LINC00963-209ENST00000607931 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
LINC00963-209ENST00000607931 SYTL4Q96C24 671 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-209ENST00000607931 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
LINC00963-209ENST00000607931 ZNF827Q17R98 1081 aa11.82□□□□□ -0.52
LINC00963-209ENST00000607931 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
LINC00963-209ENST00000607931 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
LINC00963-209ENST00000607931 HMGB2P26583 209 aaKnown RBP11.81□□□□□ -0.52
LINC00963-209ENST00000607931 LRRC4BQ9NT99 713 aa11.81□□□□□ -0.52
LINC00963-209ENST00000607931 MON2Q7Z3U7 1717 aa11.8□□□□□ -0.52
LINC00963-209ENST00000607931 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
LINC00963-209ENST00000607931 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
LINC00963-209ENST00000607931 BTAF1O14981 1849 aa11.79□□□□□ -0.52
LINC00963-209ENST00000607931 GRIN3BO60391 1043 aa11.79□□□□□ -0.52
LINC00963-209ENST00000607931 IP6K1Q92551 441 aa11.79□□□□□ -0.52
LINC00963-209ENST00000607931 LTV1Q96GA3 475 aaPredicted RBP11.79□□□□□ -0.52
LINC00963-209ENST00000607931 SIN3AQ96ST3 1273 aa11.79□□□□□ -0.52
LINC00963-209ENST00000607931 PNPLA7Q6ZV29 1317 aa11.79□□□□□ -0.52
LINC00963-209ENST00000607931 LTN1O94822 1766 aa11.78□□□□□ -0.52
LINC00963-209ENST00000607931 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
LINC00963-209ENST00000607931 CHD4Q14839 1912 aa11.78□□□□□ -0.52
LINC00963-209ENST00000607931 ANKRD36BQ8N2N9 1353 aa11.78□□□□□ -0.52
LINC00963-209ENST00000607931 USP54Q70EL1 1684 aa11.78□□□□□ -0.52
LINC00963-209ENST00000607931 AMPHP49418 695 aa11.77□□□□□ -0.53
LINC00963-209ENST00000607931 PRIM1P49642 420 aaKnown RBP11.77□□□□□ -0.53
LINC00963-209ENST00000607931 COG3Q96JB2 828 aa11.77□□□□□ -0.53
LINC00963-209ENST00000607931 SLC12A5Q9H2X9 1139 aa11.77□□□□□ -0.53
LINC00963-209ENST00000607931 CCNL1Q9UK58 526 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-209ENST00000607931 USP47Q96K76 1375 aa11.77□□□□□ -0.53
LINC00963-209ENST00000607931 CD163L1Q9NR16 1453 aa11.76□□□□□ -0.53
LINC00963-209ENST00000607931 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
LINC00963-209ENST00000607931 A0A1W2PP64 1363 aa11.76□□□□□ -0.53
LINC00963-209ENST00000607931 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
LINC00963-209ENST00000607931 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
LINC00963-209ENST00000607931 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
LINC00963-209ENST00000607931 QSER1Q2KHR3 1735 aa11.74□□□□□ -0.53
LINC00963-209ENST00000607931 KCNQ4P56696 695 aa11.74□□□□□ -0.53
LINC00963-209ENST00000607931 NLGN2Q8NFZ4 835 aa11.74□□□□□ -0.53
LINC00963-209ENST00000607931 SMG6Q86US8 1419 aaKnown RBP11.74□□□□□ -0.53
LINC00963-209ENST00000607931 HOXC9P31274 260 aa11.73□□□□□ -0.53
LINC00963-209ENST00000607931 CGNL1Q0VF96 1302 aa11.73□□□□□ -0.53
LINC00963-209ENST00000607931 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
LINC00963-209ENST00000607931 RAPGEF4Q8WZA2 1011 aa11.73□□□□□ -0.53
LINC00963-209ENST00000607931 MAP3K19Q56UN5 1328 aa11.72□□□□□ -0.53
LINC00963-209ENST00000607931 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
LINC00963-209ENST00000607931 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
LINC00963-209ENST00000607931 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
LINC00963-209ENST00000607931 TONSLQ96HA7 1378 aa11.71□□□□□ -0.53
LINC00963-209ENST00000607931 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
LINC00963-209ENST00000607931 COL23A1Q86Y22 540 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-209ENST00000607931 SPDYE1Q8NFV5 336 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-209ENST00000607931 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-209ENST00000607931 DOT1LQ8TEK3 1739 aa11.71□□□□□ -0.54
LINC00963-209ENST00000607931 NSD2O96028 1365 aa11.7□□□□□ -0.54
LINC00963-209ENST00000607931 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00963-209ENST00000607931 TATP17735 454 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-209ENST00000607931 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
LINC00963-209ENST00000607931 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
LINC00963-209ENST00000607931 UTRNP46939 3433 aa11.7□□□□□ -0.54
LINC00963-209ENST00000607931 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
LINC00963-209ENST00000607931 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
LINC00963-209ENST00000607931 LY75O60449 1722 aa11.69□□□□□ -0.54
LINC00963-209ENST00000607931 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
LINC00963-209ENST00000607931 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
LINC00963-209ENST00000607931 AK7Q96M32 723 aa11.68□□□□□ -0.54
LINC00963-209ENST00000607931 MEGF6O75095 1541 aa11.68□□□□□ -0.54
LINC00963-209ENST00000607931 SHANK3Q9BYB0 1731 aa11.68□□□□□ -0.54
LINC00963-209ENST00000607931 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
LINC00963-209ENST00000607931 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
LINC00963-209ENST00000607931 MPRIPQ6WCQ1 1025 aa11.67□□□□□ -0.54
LINC00963-209ENST00000607931 SMARCC1Q92922 1105 aaPredicted RBP11.67□□□□□ -0.54
LINC00963-209ENST00000607931 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
LINC00963-209ENST00000607931 NSD3Q9BZ95 1437 aa11.67□□□□□ -0.54
LINC00963-209ENST00000607931 RRS1Q15050 365 aaKnown RBP11.66□□□□□ -0.54
LINC00963-209ENST00000607931 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
LINC00963-209ENST00000607931 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
LINC00963-209ENST00000607931 KAT6BQ8WYB5 2073 aa11.66□□□□□ -0.54
LINC00963-209ENST00000607931 ST20-MTHFSA0A0A6YYL1 179 aa11.65□□□□□ -0.54
LINC00963-209ENST00000607931 FBLN1P23142 703 aa11.65□□□□□ -0.54
LINC00963-209ENST00000607931 ZNF526Q8TF50 670 aaPredicted RBP11.65□□□□□ -0.54
LINC00963-209ENST00000607931 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
LINC00963-209ENST00000607931 TUBGCP6Q96RT7 1819 aa11.65□□□□□ -0.55
LINC00963-209ENST00000607931 PHF14O94880 888 aa11.64□□□□□ -0.55
LINC00963-209ENST00000607931 HSPA6P17066 643 aa11.64□□□□□ -0.55
LINC00963-209ENST00000607931 TMF1P82094 1093 aa11.64□□□□□ -0.55
LINC00963-209ENST00000607931 C5P01031 1676 aa11.64□□□□□ -0.55
LINC00963-209ENST00000607931 INSRP06213 1382 aa11.64□□□□□ -0.55
LINC00963-209ENST00000607931 FLT4P35916 1363 aa11.64□□□□□ -0.55
LINC00963-209ENST00000607931 KIF24Q5T7B8 1368 aa11.64□□□□□ -0.55
LINC00963-209ENST00000607931 FYB1O15117 783 aa11.63□□□□□ -0.55
LINC00963-209ENST00000607931 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms