RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 KCNQ2O43526 872 aa17.43■□□□□ 0.38
SHROOM1-207ENST00000606676 SBF2Q86WG5 1849 aa17.42■□□□□ 0.38
SHROOM1-207ENST00000606676 TATP17735 454 aaPredicted RBP17.42■□□□□ 0.38
SHROOM1-207ENST00000606676 MTHFSP49914 203 aa17.41■□□□□ 0.38
SHROOM1-207ENST00000606676 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
SHROOM1-207ENST00000606676 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
SHROOM1-207ENST00000606676 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
SHROOM1-207ENST00000606676 IGSF1Q8N6C5 1336 aa17.4■□□□□ 0.38
SHROOM1-207ENST00000606676 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.37
SHROOM1-207ENST00000606676 PLSCR1O15162 318 aa17.39■□□□□ 0.37
SHROOM1-207ENST00000606676 IL13P35225 146 aa17.38■□□□□ 0.37
SHROOM1-207ENST00000606676 CYP27B1O15528 508 aa17.37■□□□□ 0.37
SHROOM1-207ENST00000606676 PROM2Q8N271 834 aa17.37■□□□□ 0.37
SHROOM1-207ENST00000606676 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
SHROOM1-207ENST00000606676 ZEB1P37275 1124 aaPredicted RBP17.36■□□□□ 0.37
SHROOM1-207ENST00000606676 PCDH11XQ9BZA7 1347 aa17.36■□□□□ 0.37
SHROOM1-207ENST00000606676 PCDH11YQ9BZA8 1340 aa17.36■□□□□ 0.37
SHROOM1-207ENST00000606676 AEBP1Q8IUX7 1158 aa17.35■□□□□ 0.37
SHROOM1-207ENST00000606676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHROOM1-207ENST00000606676 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
SHROOM1-207ENST00000606676 RREB1Q92766 1687 aa17.34■□□□□ 0.37
SHROOM1-207ENST00000606676 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.37
SHROOM1-207ENST00000606676 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.36
SHROOM1-207ENST00000606676 SPG7Q9UQ90 795 aa17.33■□□□□ 0.36
SHROOM1-207ENST00000606676 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.36
SHROOM1-207ENST00000606676 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.36
SHROOM1-207ENST00000606676 KDRP35968 1356 aa17.32■□□□□ 0.36
SHROOM1-207ENST00000606676 NKX1-1Q15270 411 aaPredicted RBP17.32■□□□□ 0.36
SHROOM1-207ENST00000606676 TXNRD1Q16881 649 aa17.32■□□□□ 0.36
SHROOM1-207ENST00000606676 COL3A1P02461 1466 aaPredicted RBP17.31■□□□□ 0.36
SHROOM1-207ENST00000606676 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
SHROOM1-207ENST00000606676 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
SHROOM1-207ENST00000606676 R3HDM1Q15032 1099 aaKnown RBP17.31■□□□□ 0.36
SHROOM1-207ENST00000606676 SULT6B1Q6IMI4 303 aa17.31■□□□□ 0.36
SHROOM1-207ENST00000606676 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
SHROOM1-207ENST00000606676 NUP188Q5SRE5 1749 aa17.3■□□□□ 0.36
SHROOM1-207ENST00000606676 PHKG2P15735 406 aa17.29■□□□□ 0.36
SHROOM1-207ENST00000606676 PPP2R1AP30153 589 aa17.29■□□□□ 0.36
SHROOM1-207ENST00000606676 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
SHROOM1-207ENST00000606676 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
SHROOM1-207ENST00000606676 BTAF1O14981 1849 aa17.28■□□□□ 0.36
SHROOM1-207ENST00000606676 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
SHROOM1-207ENST00000606676 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.36
SHROOM1-207ENST00000606676 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.36
SHROOM1-207ENST00000606676 NBPF14Q5TI25 921 aa17.27■□□□□ 0.36
SHROOM1-207ENST00000606676 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
SHROOM1-207ENST00000606676 HMOX1P09601 288 aa17.26■□□□□ 0.35
SHROOM1-207ENST00000606676 LRRC4BQ9NT99 713 aa17.26■□□□□ 0.35
SHROOM1-207ENST00000606676 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
SHROOM1-207ENST00000606676 MPRIPQ6WCQ1 1025 aa17.25■□□□□ 0.35
SHROOM1-207ENST00000606676 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
SHROOM1-207ENST00000606676 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
SHROOM1-207ENST00000606676 PIGBQ92521 554 aa17.23■□□□□ 0.35
SHROOM1-207ENST00000606676 U2SURPO15042 1029 aaKnown RBP17.22■□□□□ 0.35
SHROOM1-207ENST00000606676 SLC27A3Q5K4L6 730 aa17.22■□□□□ 0.35
SHROOM1-207ENST00000606676 CFAP53Q96M91 514 aa17.22■□□□□ 0.35
SHROOM1-207ENST00000606676 KCNQ4P56696 695 aa17.21■□□□□ 0.35
SHROOM1-207ENST00000606676 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
SHROOM1-207ENST00000606676 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.34
SHROOM1-207ENST00000606676 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
SHROOM1-207ENST00000606676 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
SHROOM1-207ENST00000606676 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
SHROOM1-207ENST00000606676 ERVV-2B6SEH9 535 aa17.19■□□□□ 0.34
SHROOM1-207ENST00000606676 MTHFSDQ2M296 383 aaKnown RBP17.19■□□□□ 0.34
SHROOM1-207ENST00000606676 STK32BQ9NY57 414 aa17.19■□□□□ 0.34
SHROOM1-207ENST00000606676 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
SHROOM1-207ENST00000606676 LY75O60449 1722 aa17.18■□□□□ 0.34
SHROOM1-207ENST00000606676 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
SHROOM1-207ENST00000606676 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
SHROOM1-207ENST00000606676 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
SHROOM1-207ENST00000606676 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
SHROOM1-207ENST00000606676 ITGB4P16144 1822 aa17.18■□□□□ 0.34
SHROOM1-207ENST00000606676 RALBP1Q15311 655 aa17.17■□□□□ 0.34
SHROOM1-207ENST00000606676 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
SHROOM1-207ENST00000606676 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
SHROOM1-207ENST00000606676 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
SHROOM1-207ENST00000606676 CCNL1Q9UK58 526 aaPredicted RBP17.17■□□□□ 0.34
SHROOM1-207ENST00000606676 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
SHROOM1-207ENST00000606676 NUDCQ9Y266 331 aa17.17■□□□□ 0.34
SHROOM1-207ENST00000606676 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
SHROOM1-207ENST00000606676 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
SHROOM1-207ENST00000606676 PHACTR3Q96KR7 559 aa17.15■□□□□ 0.34
SHROOM1-207ENST00000606676 LGR6Q9HBX8 967 aa17.15■□□□□ 0.34
SHROOM1-207ENST00000606676 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
SHROOM1-207ENST00000606676 PRKAR2BP31323 418 aa17.14■□□□□ 0.33
SHROOM1-207ENST00000606676 CABP4P57796 275 aa17.14■□□□□ 0.33
SHROOM1-207ENST00000606676 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
SHROOM1-207ENST00000606676 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
SHROOM1-207ENST00000606676 LRP5O75197 1615 aa17.12■□□□□ 0.33
SHROOM1-207ENST00000606676 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
SHROOM1-207ENST00000606676 FCHSD2O94868 740 aa17.12■□□□□ 0.33
SHROOM1-207ENST00000606676 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
SHROOM1-207ENST00000606676 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
SHROOM1-207ENST00000606676 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
SHROOM1-207ENST00000606676 SIK1P57059 783 aa17.11■□□□□ 0.33
SHROOM1-207ENST00000606676 SLC4A9Q96Q91 983 aa17.11■□□□□ 0.33
SHROOM1-207ENST00000606676 ITPK1Q13572 414 aa17.1■□□□□ 0.33
SHROOM1-207ENST00000606676 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
SHROOM1-207ENST00000606676 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
SHROOM1-207ENST00000606676 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms