RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 MEGF6O75095 1541 aa32.37■■■□□ 2.77
SSX2IP-209ENST00000603677 NBPF14Q5TI25 921 aa32.36■■■□□ 2.77
SSX2IP-209ENST00000603677 TNNT2P45379 298 aaPredicted RBP32.35■■■□□ 2.77
SSX2IP-209ENST00000603677 DDX54Q8TDD1 881 aaKnown RBP32.35■■■□□ 2.77
SSX2IP-209ENST00000603677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.34■■■□□ 2.77
SSX2IP-209ENST00000603677 PCDH11XQ9BZA7 1347 aa32.32■■■□□ 2.76
SSX2IP-209ENST00000603677 PCDH11YQ9BZA8 1340 aa32.32■■■□□ 2.76
SSX2IP-209ENST00000603677 EYA1Q99502 592 aa32.32■■■□□ 2.76
SSX2IP-209ENST00000603677 USHBP1Q8N6Y0 703 aa32.31■■■□□ 2.76
SSX2IP-209ENST00000603677 EIF4A2Q14240 407 aaKnown RBP32.3■■■□□ 2.76
SSX2IP-209ENST00000603677 SHANK3Q9BYB0 1731 aa32.3■■■□□ 2.76
SSX2IP-209ENST00000603677 NUP188Q5SRE5 1749 aa32.29■■■□□ 2.76
SSX2IP-209ENST00000603677 KAT6BQ8WYB5 2073 aa32.29■■■□□ 2.76
SSX2IP-209ENST00000603677 KCNQ2O43526 872 aa32.27■■■□□ 2.76
SSX2IP-209ENST00000603677 SPG7Q9UQ90 795 aa32.27■■■□□ 2.76
SSX2IP-209ENST00000603677 PTF1AQ7RTS3 328 aa32.26■■■□□ 2.75
SSX2IP-209ENST00000603677 PKD1L3Q7Z443 1732 aa32.26■■■□□ 2.75
SSX2IP-209ENST00000603677 IGSF1Q8N6C5 1336 aa32.26■■■□□ 2.75
SSX2IP-209ENST00000603677 ACSBG1Q96GR2 724 aa32.25■■■□□ 2.75
SSX2IP-209ENST00000603677 HMGB2P26583 209 aaKnown RBP32.23■■■□□ 2.75
SSX2IP-209ENST00000603677 BTAF1O14981 1849 aa32.22■■■□□ 2.75
SSX2IP-209ENST00000603677 TXNRD1Q16881 649 aa32.22■■■□□ 2.75
SSX2IP-209ENST00000603677 PROM2Q8N271 834 aa32.21■■■□□ 2.75
SSX2IP-209ENST00000603677 R3HDM1Q15032 1099 aaKnown RBP32.2■■■□□ 2.75
SSX2IP-209ENST00000603677 NKX1-1Q15270 411 aaPredicted RBP32.19■■■□□ 2.74
SSX2IP-209ENST00000603677 PRIM1P49642 420 aaKnown RBP32.18■■■□□ 2.74
SSX2IP-209ENST00000603677 PSDA5PKW4 1024 aaPredicted RBP32.17■■■□□ 2.74
SSX2IP-209ENST00000603677 MTHFSP49914 203 aa32.17■■■□□ 2.74
SSX2IP-209ENST00000603677 SLC27A3Q5K4L6 730 aa32.17■■■□□ 2.74
SSX2IP-209ENST00000603677 CC2D1BQ5T0F9 858 aaKnown RBP32.17■■■□□ 2.74
SSX2IP-209ENST00000603677 DOT1LQ8TEK3 1739 aa32.17■■■□□ 2.74
SSX2IP-209ENST00000603677 CYP27B1O15528 508 aa32.16■■■□□ 2.74
SSX2IP-209ENST00000603677 LRP5O75197 1615 aa32.15■■■□□ 2.74
SSX2IP-209ENST00000603677 AMOTQ4VCS5 1084 aa32.15■■■□□ 2.74
SSX2IP-209ENST00000603677 IL13P35225 146 aa32.14■■■□□ 2.74
SSX2IP-209ENST00000603677 IFNL2Q8IZJ0 200 aa32.14■■■□□ 2.74
SSX2IP-209ENST00000603677 SRCAPQ6ZRS2 3230 aa32.13■■■□□ 2.73
SSX2IP-209ENST00000603677 KDRP35968 1356 aa32.13■■■□□ 2.73
SSX2IP-209ENST00000603677 SYTL4Q96C24 671 aaPredicted RBP32.13■■■□□ 2.73
SSX2IP-209ENST00000603677 PLEKHO1Q53GL0 409 aaPredicted RBP32.11■■■□□ 2.73
SSX2IP-209ENST00000603677 HSP90AB1P08238 724 aaKnown RBP32.09■■■□□ 2.73
SSX2IP-209ENST00000603677 STK32BQ9NY57 414 aa32.09■■■□□ 2.73
SSX2IP-209ENST00000603677 PHKG2P15735 406 aa32.07■■■□□ 2.72
SSX2IP-209ENST00000603677 LY75O60449 1722 aa32.06■■■□□ 2.72
SSX2IP-209ENST00000603677 DIAPH1O60610 1272 aaKnown RBP32.06■■■□□ 2.72
SSX2IP-209ENST00000603677 ZEB1P37275 1124 aaPredicted RBP32.06■■■□□ 2.72
SSX2IP-209ENST00000603677 SLC15A2Q16348 729 aa32.06■■■□□ 2.72
SSX2IP-209ENST00000603677 SULT6B1Q6IMI4 303 aa32.05■■■□□ 2.72
SSX2IP-209ENST00000603677 SMARCC1Q92922 1105 aaPredicted RBP32.04■■■□□ 2.72
SSX2IP-209ENST00000603677 ANO8Q9HCE9 1232 aaPredicted RBP32.03■■■□□ 2.72
SSX2IP-209ENST00000603677 PAPPAQ13219 1627 aa32.03■■■□□ 2.72
SSX2IP-209ENST00000603677 ITGB4P16144 1822 aa32.02■■■□□ 2.72
SSX2IP-209ENST00000603677 DCAF5Q96JK2 942 aa32.01■■■□□ 2.71
SSX2IP-209ENST00000603677 ERVV-2B6SEH9 535 aa32■■■□□ 2.71
SSX2IP-209ENST00000603677 CFAP53Q96M91 514 aa32■■■□□ 2.71
SSX2IP-209ENST00000603677 MPRIPQ6WCQ1 1025 aa31.99■■■□□ 2.71
SSX2IP-209ENST00000603677 LRRC4BQ9NT99 713 aa31.99■■■□□ 2.71
SSX2IP-209ENST00000603677 TOGARAM1Q9Y4F4 1720 aa31.98■■■□□ 2.71
SSX2IP-209ENST00000603677 AEBP1Q8IUX7 1158 aa31.97■■■□□ 2.71
SSX2IP-209ENST00000603677 SPON1Q9HCB6 807 aa31.97■■■□□ 2.71
SSX2IP-209ENST00000603677 C1orf141Q5JVX7 400 aa31.96■■■□□ 2.71
SSX2IP-209ENST00000603677 TMOD3Q9NYL9 352 aa31.96■■■□□ 2.71
SSX2IP-209ENST00000603677 CASZ1Q86V15 1759 aa31.95■■■□□ 2.71
SSX2IP-209ENST00000603677 ZNF530Q6P9A1 599 aaPredicted RBP31.95■■■□□ 2.71
SSX2IP-209ENST00000603677 PIGBQ92521 554 aa31.95■■■□□ 2.71
SSX2IP-209ENST00000603677 CCNL1Q9UK58 526 aaPredicted RBP31.95■■■□□ 2.71
SSX2IP-209ENST00000603677 COL3A1P02461 1466 aaPredicted RBP31.95■■■□□ 2.7
SSX2IP-209ENST00000603677 QSER1Q2KHR3 1735 aa31.94■■■□□ 2.7
SSX2IP-209ENST00000603677 PALLDQ8WX93 1383 aa31.94■■■□□ 2.7
SSX2IP-209ENST00000603677 AKT1S1Q96B36 256 aa31.93■■■□□ 2.7
SSX2IP-209ENST00000603677 NUDCQ9Y266 331 aa31.92■■■□□ 2.7
SSX2IP-209ENST00000603677 PPP2R1AP30153 589 aa31.9■■■□□ 2.7
SSX2IP-209ENST00000603677 AKAP4Q5JQC9 854 aa31.9■■■□□ 2.7
SSX2IP-209ENST00000603677 SLC16A10Q8TF71 515 aa31.9■■■□□ 2.7
SSX2IP-209ENST00000603677 CNGB1Q14028 1251 aaPredicted RBP31.87■■■□□ 2.69
SSX2IP-209ENST00000603677 HMOX1P09601 288 aa31.86■■■□□ 2.69
SSX2IP-209ENST00000603677 MTFR1LQ9H019 292 aa31.86■■■□□ 2.69
SSX2IP-209ENST00000603677 ZNF827Q17R98 1081 aa31.85■■■□□ 2.69
SSX2IP-209ENST00000603677 TFCP2L1Q9NZI6 479 aa31.84■■■□□ 2.69
SSX2IP-209ENST00000603677 KDM6AO15550 1401 aaPredicted RBP31.83■■■□□ 2.69
SSX2IP-209ENST00000603677 U2SURPO15042 1029 aaKnown RBP31.83■■■□□ 2.69
SSX2IP-209ENST00000603677 CABP4P57796 275 aa31.83■■■□□ 2.69
SSX2IP-209ENST00000603677 FLAD1Q8NFF5 587 aa31.83■■■□□ 2.69
SSX2IP-209ENST00000603677 C5P01031 1676 aa31.83■■■□□ 2.69
SSX2IP-209ENST00000603677 ZNF831Q5JPB2 1677 aa31.83■■■□□ 2.69
SSX2IP-209ENST00000603677 TAF1LQ8IZX4 1826 aa31.82■■■□□ 2.68
SSX2IP-209ENST00000603677 LOC102724428A0A0B4J2F2 783 aa31.81■■■□□ 2.68
SSX2IP-209ENST00000603677 SIK1P57059 783 aa31.81■■■□□ 2.68
SSX2IP-209ENST00000603677 RALBP1Q15311 655 aa31.81■■■□□ 2.68
SSX2IP-209ENST00000603677 SCN11AQ9UI33 1791 aa31.81■■■□□ 2.68
SSX2IP-209ENST00000603677 ATG3Q9NT62 314 aa31.8■■■□□ 2.68
SSX2IP-209ENST00000603677 GAS2L2Q8NHY3 880 aa31.79■■■□□ 2.68
SSX2IP-209ENST00000603677 ASAP1Q9ULH1 1129 aa31.79■■■□□ 2.68
SSX2IP-209ENST00000603677 FCHSD2O94868 740 aa31.77■■■□□ 2.68
SSX2IP-209ENST00000603677 KCNQ4P56696 695 aa31.77■■■□□ 2.68
SSX2IP-209ENST00000603677 MTHFSDQ2M296 383 aaKnown RBP31.77■■■□□ 2.68
SSX2IP-209ENST00000603677 PDGFDQ9GZP0 370 aaPredicted RBP31.77■■■□□ 2.68
SSX2IP-209ENST00000603677 PPP1R1BQ9UD71 204 aaPredicted RBP31.77■■■□□ 2.68
SSX2IP-209ENST00000603677 PNPLA7Q6ZV29 1317 aa31.76■■■□□ 2.68
SSX2IP-209ENST00000603677 ZBTB7AO95365 584 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms