RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 NR3C2P08235 984 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 GTF2IP78347 998 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 CC2D2BQ6DHV5 1058 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 OGFOD1Q8N543 542 aa13.68□□□□□ -0.22
SGMS1-206ENST00000602565 MYT1Q01538 1121 aa13.67□□□□□ -0.22
SGMS1-206ENST00000602565 ZNF784Q8NCA9 323 aaPredicted RBP13.67□□□□□ -0.22
SGMS1-206ENST00000602565 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
SGMS1-206ENST00000602565 J3QL48 77 aa13.66□□□□□ -0.22
SGMS1-206ENST00000602565 ERVK-9P63128 1117 aa13.66□□□□□ -0.22
SGMS1-206ENST00000602565 PRR20EP86478 221 aa13.66□□□□□ -0.22
SGMS1-206ENST00000602565 PRR20CP86479 221 aa13.66□□□□□ -0.22
SGMS1-206ENST00000602565 PRR20DP86480 221 aa13.66□□□□□ -0.22
SGMS1-206ENST00000602565 PRR20BP86481 221 aa13.66□□□□□ -0.22
SGMS1-206ENST00000602565 PRR20AP86496 221 aa13.66□□□□□ -0.22
SGMS1-206ENST00000602565 PDE4CQ08493 712 aa13.66□□□□□ -0.22
SGMS1-206ENST00000602565 CRTC2Q53ET0 693 aaPredicted RBP13.66□□□□□ -0.22
SGMS1-206ENST00000602565 ZNF594Q96JF6 807 aaPredicted RBP13.66□□□□□ -0.22
SGMS1-206ENST00000602565 RBM19Q9Y4C8 960 aaKnown RBP13.66□□□□□ -0.22
SGMS1-206ENST00000602565 PDIA4P13667 645 aaKnown RBP13.65□□□□□ -0.22
SGMS1-206ENST00000602565 SCTRP47872 440 aa13.65□□□□□ -0.22
SGMS1-206ENST00000602565 NOVA2Q9UNW9 492 aaKnown RBP13.65□□□□□ -0.22
SGMS1-206ENST00000602565 TOR4AQ9NXH8 423 aa13.64□□□□□ -0.23
SGMS1-206ENST00000602565 CLDN10P78369 228 aa13.64□□□□□ -0.23
SGMS1-206ENST00000602565 PTK7Q13308 1070 aa13.64□□□□□ -0.23
SGMS1-206ENST00000602565 TRIM67Q6ZTA4 783 aa13.64□□□□□ -0.23
SGMS1-206ENST00000602565 LARGE2Q8N3Y3 721 aa13.64□□□□□ -0.23
SGMS1-206ENST00000602565 TRIM26Q12899 539 aaPredicted RBP13.63□□□□□ -0.23
SGMS1-206ENST00000602565 ELOAQ14241 798 aaKnown RBP13.63□□□□□ -0.23
SGMS1-206ENST00000602565 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
SGMS1-206ENST00000602565 USTQ9Y2C2 406 aa13.62□□□□□ -0.23
SGMS1-206ENST00000602565 WDR4P57081 412 aaKnown RBP13.61□□□□□ -0.23
SGMS1-206ENST00000602565 ANKMY2Q8IV38 441 aa13.61□□□□□ -0.23
SGMS1-206ENST00000602565 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
SGMS1-206ENST00000602565 SMPD1P17405 629 aa13.6□□□□□ -0.23
SGMS1-206ENST00000602565 CCDC102BQ68D86 513 aa13.6□□□□□ -0.23
SGMS1-206ENST00000602565 CYP2U1Q7Z449 544 aa13.6□□□□□ -0.23
SGMS1-206ENST00000602565 TPCN2Q8NHX9 752 aa13.6□□□□□ -0.23
SGMS1-206ENST00000602565 PCDHGA11Q9Y5H2 935 aa13.6□□□□□ -0.23
SGMS1-206ENST00000602565 ZIC2O95409 532 aaPredicted RBP13.59□□□□□ -0.23
SGMS1-206ENST00000602565 DPYDQ12882 1025 aa13.59□□□□□ -0.23
SGMS1-206ENST00000602565 OSBPL3Q9H4L5 887 aa13.59□□□□□ -0.23
SGMS1-206ENST00000602565 ZMIZ1Q9ULJ6 1067 aa13.59□□□□□ -0.23
SGMS1-206ENST00000602565 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
SGMS1-206ENST00000602565 LILRA1O75019 489 aa13.58□□□□□ -0.24
SGMS1-206ENST00000602565 SIX5Q8N196 739 aa13.58□□□□□ -0.24
SGMS1-206ENST00000602565 STK32AQ8WU08 396 aa13.58□□□□□ -0.24
SGMS1-206ENST00000602565 ITPKCQ96DU7 683 aa13.58□□□□□ -0.24
SGMS1-206ENST00000602565 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
SGMS1-206ENST00000602565 SEC13P55735 322 aa13.55□□□□□ -0.24
SGMS1-206ENST00000602565 TMEM164Q5U3C3 297 aa13.55□□□□□ -0.24
SGMS1-206ENST00000602565 ZFAND3Q9H8U3 227 aa13.55□□□□□ -0.24
SGMS1-206ENST00000602565 TIMP2P16035 220 aa13.54□□□□□ -0.24
SGMS1-206ENST00000602565 ADD1P35611 737 aaKnown RBP13.54□□□□□ -0.24
SGMS1-206ENST00000602565 HPS1Q92902 700 aa13.54□□□□□ -0.24
SGMS1-206ENST00000602565 ADH1AP07327 375 aa13.53□□□□□ -0.24
SGMS1-206ENST00000602565 CBLBQ13191 982 aa13.53□□□□□ -0.24
SGMS1-206ENST00000602565 TRAIPQ9BWF2 469 aa13.53□□□□□ -0.24
SGMS1-206ENST00000602565 FAM187AA6NFU0 413 aa13.52□□□□□ -0.25
SGMS1-206ENST00000602565 GNRH1P01148 92 aa13.52□□□□□ -0.25
SGMS1-206ENST00000602565 KLF16Q9BXK1 252 aaPredicted RBP13.52□□□□□ -0.25
SGMS1-206ENST00000602565 TMEM88BA6NKF7 163 aa13.51□□□□□ -0.25
SGMS1-206ENST00000602565 SFI1A8K8P3 1242 aa13.51□□□□□ -0.25
SGMS1-206ENST00000602565 GDF10P55107 478 aa13.51□□□□□ -0.25
SGMS1-206ENST00000602565 ESCO1Q5FWF5 840 aa13.51□□□□□ -0.25
SGMS1-206ENST00000602565 CARNS1A5YM72 827 aa13.5□□□□□ -0.25
SGMS1-206ENST00000602565 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
SGMS1-206ENST00000602565 Q6ZVU0 165 aa13.49□□□□□ -0.25
SGMS1-206ENST00000602565 ARHGEF10LQ9HCE6 1279 aa13.49□□□□□ -0.25
SGMS1-206ENST00000602565 DKK1O94907 266 aa13.48□□□□□ -0.25
SGMS1-206ENST00000602565 RAB6BQ9NRW1 208 aa13.48□□□□□ -0.25
SGMS1-206ENST00000602565 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
SGMS1-206ENST00000602565 BACH1O14867 736 aa13.47□□□□□ -0.25
SGMS1-206ENST00000602565 CAPN5O15484 640 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-206ENST00000602565 GFRA3O60609 400 aa13.47□□□□□ -0.25
SGMS1-206ENST00000602565 STAU1O95793 577 aaKnown RBP13.47□□□□□ -0.25
SGMS1-206ENST00000602565 SCNN1DP51172 638 aa13.47□□□□□ -0.25
SGMS1-206ENST00000602565 SWI5Q1ZZU3 235 aa13.47□□□□□ -0.25
SGMS1-206ENST00000602565 HINFPQ9BQA5 517 aa13.47□□□□□ -0.25
SGMS1-206ENST00000602565 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
SGMS1-206ENST00000602565 TMEM229AB2RXF0 380 aa13.46□□□□□ -0.25
SGMS1-206ENST00000602565 INHAP05111 366 aa13.46□□□□□ -0.25
SGMS1-206ENST00000602565 RELBQ01201 579 aa13.46□□□□□ -0.25
SGMS1-206ENST00000602565 AGBL1Q96MI9 1066 aa13.46□□□□□ -0.25
SGMS1-206ENST00000602565 IRX2Q9BZI1 471 aaPredicted RBP13.46□□□□□ -0.25
SGMS1-206ENST00000602565 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.25
SGMS1-206ENST00000602565 WASLO00401 505 aaPredicted RBP13.45□□□□□ -0.26
SGMS1-206ENST00000602565 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
SGMS1-206ENST00000602565 B4GALNT3Q6L9W6 998 aa13.45□□□□□ -0.26
SGMS1-206ENST00000602565 M0R2N6 131 aa13.44□□□□□ -0.26
SGMS1-206ENST00000602565 UPP2O95045 317 aa13.44□□□□□ -0.26
SGMS1-206ENST00000602565 PTGIRP43119 386 aa13.44□□□□□ -0.26
SGMS1-206ENST00000602565 MEIOBQ8N635 442 aa13.44□□□□□ -0.26
SGMS1-206ENST00000602565 TSEN2Q8NCE0 465 aaKnown RBP13.44□□□□□ -0.26
SGMS1-206ENST00000602565 NPM2Q86SE8 214 aaKnown RBP13.43□□□□□ -0.26
SGMS1-206ENST00000602565 CLP1Q92989 425 aaKnown RBP13.43□□□□□ -0.26
SGMS1-206ENST00000602565 A0A1W2PRU2 124 aa13.42□□□□□ -0.26
SGMS1-206ENST00000602565 MEN1O00255 615 aa13.42□□□□□ -0.26
SGMS1-206ENST00000602565 NRG2O14511 850 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms