RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-233ENST00000602421 MCM10Q7L590 875 aa23.31■■□□□ 1.32
MACF1-233ENST00000602421 IFT57Q9NWB7 429 aa23.31■■□□□ 1.32
MACF1-233ENST00000602421 DLG5Q8TDM6 1919 aa23.31■■□□□ 1.32
MACF1-233ENST00000602421 NUTM2BA6NNL0 878 aaPredicted RBP23.3■■□□□ 1.32
MACF1-233ENST00000602421 NUTM2EB1AL46 878 aaPredicted RBP23.3■■□□□ 1.32
MACF1-233ENST00000602421 NUTM2AQ8IVF1 878 aaPredicted RBP23.3■■□□□ 1.32
MACF1-233ENST00000602421 BTG4Q9NY30 223 aa23.3■■□□□ 1.32
MACF1-233ENST00000602421 FANCIQ9NVI1 1328 aa23.3■■□□□ 1.32
MACF1-233ENST00000602421 MAP3K5Q99683 1374 aa23.3■■□□□ 1.32
MACF1-233ENST00000602421 JCADQ9P266 1359 aa23.3■■□□□ 1.32
MACF1-233ENST00000602421 ADAMTS2O95450 1211 aa23.29■■□□□ 1.32
MACF1-233ENST00000602421 TSR2Q969E8 191 aaKnown RBP23.29■■□□□ 1.32
MACF1-233ENST00000602421 ZNF530Q6P9A1 599 aaPredicted RBP23.28■■□□□ 1.32
MACF1-233ENST00000602421 COL14A1Q05707 1796 aaKnown RBP23.28■■□□□ 1.32
MACF1-233ENST00000602421 CFAP44Q96MT7 982 aa23.27■■□□□ 1.32
MACF1-233ENST00000602421 CARD10Q9BWT7 1032 aa23.27■■□□□ 1.32
MACF1-233ENST00000602421 RNF123Q5XPI4 1314 aa23.26■■□□□ 1.31
MACF1-233ENST00000602421 ZNF853P0CG23 659 aa23.26■■□□□ 1.31
MACF1-233ENST00000602421 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
MACF1-233ENST00000602421 LARP1Q6PKG0 1096 aaKnown RBP23.26■■□□□ 1.31
MACF1-233ENST00000602421 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
MACF1-233ENST00000602421 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
MACF1-233ENST00000602421 PLEKHG2Q9H7P9 1386 aa23.25■■□□□ 1.31
MACF1-233ENST00000602421 FKBP8Q14318 412 aa23.25■■□□□ 1.31
MACF1-233ENST00000602421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.31
MACF1-233ENST00000602421 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
MACF1-233ENST00000602421 CT47B1P0C2W7 299 aaPredicted RBP23.23■■□□□ 1.31
MACF1-233ENST00000602421 MBIPQ9NS73 344 aa23.23■■□□□ 1.31
MACF1-233ENST00000602421 CRB1P82279 1406 aa23.22■■□□□ 1.31
MACF1-233ENST00000602421 MEGF6O75095 1541 aa23.22■■□□□ 1.31
MACF1-233ENST00000602421 RRP1P56182 461 aaKnown RBP23.22■■□□□ 1.31
MACF1-233ENST00000602421 IL17REQ8NFR9 667 aa23.22■■□□□ 1.31
MACF1-233ENST00000602421 CHL1O00533 1208 aa23.2■■□□□ 1.3
MACF1-233ENST00000602421 HSPA1LP34931 641 aa23.2■■□□□ 1.3
MACF1-233ENST00000602421 SPATA31A6Q5VVP1 1343 aa23.19■■□□□ 1.3
MACF1-233ENST00000602421 IL2RBP14784 551 aa23.19■■□□□ 1.3
MACF1-233ENST00000602421 IRX6P78412 446 aaPredicted RBP23.19■■□□□ 1.3
MACF1-233ENST00000602421 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
MACF1-233ENST00000602421 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
MACF1-233ENST00000602421 IFNL2Q8IZJ0 200 aa23.16■■□□□ 1.3
MACF1-233ENST00000602421 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.16■■□□□ 1.3
MACF1-233ENST00000602421 LGR6Q9HBX8 967 aa23.16■■□□□ 1.3
MACF1-233ENST00000602421 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
MACF1-233ENST00000602421 TSPYL4Q9UJ04 414 aa23.16■■□□□ 1.3
MACF1-233ENST00000602421 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
MACF1-233ENST00000602421 RNMTO43148 476 aaKnown RBP23.16■■□□□ 1.3
MACF1-233ENST00000602421 RARSP54136 660 aaKnown RBP23.16■■□□□ 1.3
MACF1-233ENST00000602421 TAF7Q15545 349 aaPredicted RBP23.16■■□□□ 1.3
MACF1-233ENST00000602421 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
MACF1-233ENST00000602421 PHKG2P15735 406 aa23.15■■□□□ 1.3
MACF1-233ENST00000602421 TEFQ10587 303 aa23.15■■□□□ 1.3
MACF1-233ENST00000602421 ZCRB1Q8TBF4 217 aaKnown RBP23.15■■□□□ 1.3
MACF1-233ENST00000602421 BCAR3O75815 825 aa23.14■■□□□ 1.29
MACF1-233ENST00000602421 PLCH1Q4KWH8 1693 aa23.13■■□□□ 1.29
MACF1-233ENST00000602421 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
MACF1-233ENST00000602421 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
MACF1-233ENST00000602421 LRRC37A3O60309 1634 aa23.12■■□□□ 1.29
MACF1-233ENST00000602421 PLIN1O60240 522 aa23.12■■□□□ 1.29
MACF1-233ENST00000602421 ZNF428Q96B54 188 aa23.12■■□□□ 1.29
MACF1-233ENST00000602421 NGLY1Q96IV0 654 aa23.12■■□□□ 1.29
MACF1-233ENST00000602421 C8orf37Q96NL8 207 aa23.12■■□□□ 1.29
MACF1-233ENST00000602421 PARP4Q9UKK3 1724 aaKnown RBP23.12■■□□□ 1.29
MACF1-233ENST00000602421 SLIT2O94813 1529 aa23.12■■□□□ 1.29
MACF1-233ENST00000602421 CYP27B1O15528 508 aa23.11■■□□□ 1.29
MACF1-233ENST00000602421 ERICH6BQ5W0A0 696 aa23.11■■□□□ 1.29
MACF1-233ENST00000602421 PCDH11XQ9BZA7 1347 aa23.11■■□□□ 1.29
MACF1-233ENST00000602421 PCDH11YQ9BZA8 1340 aa23.11■■□□□ 1.29
MACF1-233ENST00000602421 VAMP4O75379 141 aa23.1■■□□□ 1.29
MACF1-233ENST00000602421 TWISTNBQ3B726 338 aaPredicted RBP23.1■■□□□ 1.29
MACF1-233ENST00000602421 C8orf58Q8NAV2 365 aa23.1■■□□□ 1.29
MACF1-233ENST00000602421 PKD1L3Q7Z443 1732 aa23.1■■□□□ 1.29
MACF1-233ENST00000602421 ELL2O00472 640 aaPredicted RBP23.09■■□□□ 1.29
MACF1-233ENST00000602421 TSPYL6Q8N831 410 aa23.09■■□□□ 1.29
MACF1-233ENST00000602421 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
MACF1-233ENST00000602421 UNC5CLQ8IV45 518 aa23.08■■□□□ 1.29
MACF1-233ENST00000602421 SMC4Q9NTJ3 1288 aa23.08■■□□□ 1.29
MACF1-233ENST00000602421 CANXP27824 592 aaKnown RBP23.08■■□□□ 1.28
MACF1-233ENST00000602421 ALDH1L2Q3SY69 923 aa23.08■■□□□ 1.28
MACF1-233ENST00000602421 MEX3CQ5U5Q3 659 aaKnown RBP23.08■■□□□ 1.28
MACF1-233ENST00000602421 BCL2L13Q9BXK5 485 aa23.08■■□□□ 1.28
MACF1-233ENST00000602421 THRAP3Q9Y2W1 955 aaKnown RBP23.08■■□□□ 1.28
MACF1-233ENST00000602421 SPATA31A1Q5TZJ5 1347 aa23.07■■□□□ 1.28
MACF1-233ENST00000602421 NWD2Q9ULI1 1742 aa23.07■■□□□ 1.28
MACF1-233ENST00000602421 NRAPQ86VF7 1730 aa23.07■■□□□ 1.28
MACF1-233ENST00000602421 SSH1Q8WYL5 1049 aa23.07■■□□□ 1.28
MACF1-233ENST00000602421 CCDC9Q9Y3X0 531 aaKnown RBP23.07■■□□□ 1.28
MACF1-233ENST00000602421 BTBD11A6QL63 1104 aa23.06■■□□□ 1.28
MACF1-233ENST00000602421 DDX54Q8TDD1 881 aaKnown RBP23.06■■□□□ 1.28
MACF1-233ENST00000602421 CDCA7Q9BWT1 371 aaPredicted RBP23.06■■□□□ 1.28
MACF1-233ENST00000602421 LRP6O75581 1613 aa23.05■■□□□ 1.28
MACF1-233ENST00000602421 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
MACF1-233ENST00000602421 FNBP4Q8N3X1 1017 aaPredicted RBP23.05■■□□□ 1.28
MACF1-233ENST00000602421 FRAT1Q92837 279 aaPredicted RBP23.05■■□□□ 1.28
MACF1-233ENST00000602421 SPATA31A5Q5VU36 1347 aa23.05■■□□□ 1.28
MACF1-233ENST00000602421 SPATA31A7Q8IWB4 1347 aa23.05■■□□□ 1.28
MACF1-233ENST00000602421 DISP2A7MBM2 1401 aa23.05■■□□□ 1.28
MACF1-233ENST00000602421 KDM6AO15550 1401 aaPredicted RBP23.05■■□□□ 1.28
MACF1-233ENST00000602421 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
MACF1-233ENST00000602421 ADAMTS7Q9UKP4 1686 aa23.03■■□□□ 1.28
MACF1-233ENST00000602421 EXOC5O00471 708 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms