RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 ANKRD44Q8N8A2 993 aa17.99■□□□□ 0.47
SMG9-211ENST00000601170 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
SMG9-211ENST00000601170 TRAK2O60296 914 aa17.98■□□□□ 0.47
SMG9-211ENST00000601170 CD2BP2O95400 341 aaKnown RBP17.98■□□□□ 0.47
SMG9-211ENST00000601170 CRB1P82279 1406 aa17.98■□□□□ 0.47
SMG9-211ENST00000601170 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
SMG9-211ENST00000601170 GZF1Q9H116 711 aaPredicted RBP17.98■□□□□ 0.47
SMG9-211ENST00000601170 PTPRCP08575 1304 aa17.98■□□□□ 0.47
SMG9-211ENST00000601170 RIMS1Q86UR5 1692 aaKnown RBP17.98■□□□□ 0.47
SMG9-211ENST00000601170 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
SMG9-211ENST00000601170 DDX11L8A8MPP1 907 aa17.97■□□□□ 0.47
SMG9-211ENST00000601170 CEP85Q6P2H3 762 aa17.97■□□□□ 0.47
SMG9-211ENST00000601170 ARHGEF10O15013 1369 aa17.97■□□□□ 0.47
SMG9-211ENST00000601170 TTC22Q5TAA0 569 aa17.96■□□□□ 0.47
SMG9-211ENST00000601170 RPAP2Q8IXW5 612 aaPredicted RBP17.96■□□□□ 0.47
SMG9-211ENST00000601170 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
SMG9-211ENST00000601170 MAP3K19Q56UN5 1328 aa17.96■□□□□ 0.47
SMG9-211ENST00000601170 RTL1A6NKG5 1358 aa17.96■□□□□ 0.47
SMG9-211ENST00000601170 C16orf71Q8IYS4 520 aaPredicted RBP17.96■□□□□ 0.47
SMG9-211ENST00000601170 CIZ1Q9ULV3 898 aaPredicted RBP17.96■□□□□ 0.47
SMG9-211ENST00000601170 GOLGA6L3A6NEY3 463 aa17.95■□□□□ 0.46
SMG9-211ENST00000601170 K7ELQ4 463 aaPredicted RBP17.95■□□□□ 0.46
SMG9-211ENST00000601170 ARXQ96QS3 562 aa17.95■□□□□ 0.46
SMG9-211ENST00000601170 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
SMG9-211ENST00000601170 MEIS3Q99687 375 aa17.95■□□□□ 0.46
SMG9-211ENST00000601170 MIS18AQ9NYP9 233 aa17.95■□□□□ 0.46
SMG9-211ENST00000601170 FOXO3O43524 673 aa17.94■□□□□ 0.46
SMG9-211ENST00000601170 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
SMG9-211ENST00000601170 HSP90AA1P07900 732 aaKnown RBP17.94■□□□□ 0.46
SMG9-211ENST00000601170 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
SMG9-211ENST00000601170 FSD2A1L4K1 749 aa17.94■□□□□ 0.46
SMG9-211ENST00000601170 MTHFSDQ2M296 383 aaKnown RBP17.94■□□□□ 0.46
SMG9-211ENST00000601170 RGPD8O14715 1765 aaPredicted RBP17.93■□□□□ 0.46
SMG9-211ENST00000601170 FLT4P35916 1363 aa17.93■□□□□ 0.46
SMG9-211ENST00000601170 RAB3GAP1Q15042 981 aa17.93■□□□□ 0.46
SMG9-211ENST00000601170 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
SMG9-211ENST00000601170 SBNO1A3KN83 1393 aa17.93■□□□□ 0.46
SMG9-211ENST00000601170 FAM43AQ8N2R8 423 aa17.93■□□□□ 0.46
SMG9-211ENST00000601170 OTUD7AQ8TE49 926 aaPredicted RBP17.93■□□□□ 0.46
SMG9-211ENST00000601170 RTF1Q92541 710 aaKnown RBP17.93■□□□□ 0.46
SMG9-211ENST00000601170 TSPYL4Q9UJ04 414 aa17.92■□□□□ 0.46
SMG9-211ENST00000601170 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
SMG9-211ENST00000601170 EIF5BO60841 1220 aaKnown RBP17.91■□□□□ 0.46
SMG9-211ENST00000601170 XRCC6P12956 609 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMG9-211ENST00000601170 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
SMG9-211ENST00000601170 EID1Q9Y6B2 187 aa17.91■□□□□ 0.46
SMG9-211ENST00000601170 KDRP35968 1356 aa17.91■□□□□ 0.46
SMG9-211ENST00000601170 APBB1O00213 710 aa17.91■□□□□ 0.46
SMG9-211ENST00000601170 SMARCA5O60264 1052 aaPredicted RBP17.91■□□□□ 0.46
SMG9-211ENST00000601170 CEP170BQ9Y4F5 1589 aaPredicted RBP17.91■□□□□ 0.46
SMG9-211ENST00000601170 GBP4Q96PP9 640 aa17.9■□□□□ 0.46
SMG9-211ENST00000601170 DIP2AQ14689 1571 aa17.9■□□□□ 0.46
SMG9-211ENST00000601170 PIK3C2AO00443 1686 aa17.9■□□□□ 0.46
SMG9-211ENST00000601170 G2E3Q7L622 706 aa17.9■□□□□ 0.46
SMG9-211ENST00000601170 NGDNQ8NEJ9 315 aaKnown RBP17.89■□□□□ 0.45
SMG9-211ENST00000601170 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
SMG9-211ENST00000601170 EYA1Q99502 592 aa17.89■□□□□ 0.45
SMG9-211ENST00000601170 IGSF1Q8N6C5 1336 aa17.88■□□□□ 0.45
SMG9-211ENST00000601170 SDSP20132 328 aa17.88■□□□□ 0.45
SMG9-211ENST00000601170 AMPHP49418 695 aa17.88■□□□□ 0.45
SMG9-211ENST00000601170 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
SMG9-211ENST00000601170 SLIT1O75093 1534 aa17.88■□□□□ 0.45
SMG9-211ENST00000601170 F6X3S4 739 aa17.88■□□□□ 0.45
SMG9-211ENST00000601170 USP26Q9BXU7 913 aa17.88■□□□□ 0.45
SMG9-211ENST00000601170 RABEP1Q15276 862 aa17.87■□□□□ 0.45
SMG9-211ENST00000601170 HMMRO75330 724 aa17.87■□□□□ 0.45
SMG9-211ENST00000601170 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
SMG9-211ENST00000601170 ARHGAP23Q9P227 1491 aa17.87■□□□□ 0.45
SMG9-211ENST00000601170 CCT4P50991 539 aaKnown RBP17.86■□□□□ 0.45
SMG9-211ENST00000601170 PANK2Q9BZ23 570 aa17.86■□□□□ 0.45
SMG9-211ENST00000601170 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
SMG9-211ENST00000601170 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
SMG9-211ENST00000601170 LRRC37A3O60309 1634 aa17.86■□□□□ 0.45
SMG9-211ENST00000601170 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
SMG9-211ENST00000601170 SSFA2P28290 1259 aa17.84■□□□□ 0.45
SMG9-211ENST00000601170 MRE11P49959 708 aa17.84■□□□□ 0.45
SMG9-211ENST00000601170 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
SMG9-211ENST00000601170 STK31Q9BXU1 1019 aa17.84■□□□□ 0.45
SMG9-211ENST00000601170 NLRP6P59044 892 aa17.83■□□□□ 0.44
SMG9-211ENST00000601170 PTMSP20962 102 aa17.82■□□□□ 0.44
SMG9-211ENST00000601170 AK9Q5TCS8 1911 aa17.82■□□□□ 0.44
SMG9-211ENST00000601170 MARF1Q9Y4F3 1742 aaKnown RBP17.82■□□□□ 0.44
SMG9-211ENST00000601170 SKOR2Q2VWA4 1001 aaPredicted RBP17.82■□□□□ 0.44
SMG9-211ENST00000601170 HTATSF1O43719 755 aaKnown RBP17.81■□□□□ 0.44
SMG9-211ENST00000601170 GNAI2P04899 355 aa17.81■□□□□ 0.44
SMG9-211ENST00000601170 GRPEL1Q9HAV7 217 aa17.81■□□□□ 0.44
SMG9-211ENST00000601170 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
SMG9-211ENST00000601170 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
SMG9-211ENST00000601170 OSBPL3Q9H4L5 887 aa17.81■□□□□ 0.44
SMG9-211ENST00000601170 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
SMG9-211ENST00000601170 HOXC9P31274 260 aa17.8■□□□□ 0.44
SMG9-211ENST00000601170 PDE1AP54750 535 aa17.8■□□□□ 0.44
SMG9-211ENST00000601170 FLIIQ13045 1269 aa17.8■□□□□ 0.44
SMG9-211ENST00000601170 RRAGDQ9NQL2 400 aaPredicted RBP17.8■□□□□ 0.44
SMG9-211ENST00000601170 REC8O95072 547 aa17.8■□□□□ 0.44
SMG9-211ENST00000601170 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
SMG9-211ENST00000601170 NWD1Q149M9 1564 aa17.8■□□□□ 0.44
SMG9-211ENST00000601170 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
SMG9-211ENST00000601170 NUTM2GQ5VZR2 741 aa17.8■□□□□ 0.44
SMG9-211ENST00000601170 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms