RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 GORABQ5T7V8 394 aa15.6■□□□□ 0.09
NOTCH3-206ENST00000601011 MCTP1Q6DN14 999 aa15.6■□□□□ 0.09
NOTCH3-206ENST00000601011 NPC1L1Q9UHC9 1359 aa15.59■□□□□ 0.09
NOTCH3-206ENST00000601011 KIF1BO60333 1816 aa15.59■□□□□ 0.09
NOTCH3-206ENST00000601011 MCCP23508 829 aa15.59■□□□□ 0.09
NOTCH3-206ENST00000601011 RBM10P98175 930 aaKnown RBP15.59■□□□□ 0.09
NOTCH3-206ENST00000601011 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.09
NOTCH3-206ENST00000601011 GNAI2P04899 355 aa15.58■□□□□ 0.09
NOTCH3-206ENST00000601011 CCDC27Q2M243 656 aa15.58■□□□□ 0.09
NOTCH3-206ENST00000601011 TAF7LQ5H9L4 462 aa15.58■□□□□ 0.09
NOTCH3-206ENST00000601011 TBC1D9Q6ZT07 1266 aa15.58■□□□□ 0.09
NOTCH3-206ENST00000601011 ZBTB7BO15156 539 aaPredicted RBP15.58■□□□□ 0.08
NOTCH3-206ENST00000601011 CDC45O75419 566 aa15.58■□□□□ 0.08
NOTCH3-206ENST00000601011 FLIIQ13045 1269 aa15.58■□□□□ 0.08
NOTCH3-206ENST00000601011 FAM13BQ9NYF5 915 aa15.58■□□□□ 0.08
NOTCH3-206ENST00000601011 IFIT2P09913 472 aaKnown RBP15.57■□□□□ 0.08
NOTCH3-206ENST00000601011 MSNP26038 577 aaKnown RBP15.57■□□□□ 0.08
NOTCH3-206ENST00000601011 PI4KAP2A4QPH2 592 aa15.57■□□□□ 0.08
NOTCH3-206ENST00000601011 TOM1L2Q6ZVM7 507 aa15.57■□□□□ 0.08
NOTCH3-206ENST00000601011 PI4KAP1Q8N8J0 262 aa15.57■□□□□ 0.08
NOTCH3-206ENST00000601011 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
NOTCH3-206ENST00000601011 PKNOX2Q96KN3 472 aa15.57■□□□□ 0.08
NOTCH3-206ENST00000601011 NEO1Q92859 1461 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 ATP5J2-PTCD1G3V325 749 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 STK11IPQ8N1F8 1099 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 GBP4Q96PP9 640 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 DIAPH3Q9NSV4 1193 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 NUTM2BA6NNL0 878 aaPredicted RBP15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 NUTM2EB1AL46 878 aaPredicted RBP15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 NUTM2AQ8IVF1 878 aaPredicted RBP15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 ABCA9Q8IUA7 1624 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 NSD2O96028 1365 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 CWC27Q6UX04 472 aaKnown RBP15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 RNF214Q8ND24 703 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 CHPF2Q9P2E5 772 aa15.56■□□□□ 0.08
NOTCH3-206ENST00000601011 MYOM2P54296 1465 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 TMEM2Q9UHN6 1383 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 ST18O60284 1047 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 CHMP4CQ96CF2 233 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 PANK2Q9BZ23 570 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 PRDM11Q9NQV5 511 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 NBPF6Q5VWK0 638 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 NBPF4Q96M43 638 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 DNAJC2Q99543 621 aaKnown RBP15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 CHMP5Q9NZZ3 219 aa15.55■□□□□ 0.08
NOTCH3-206ENST00000601011 SRCIN1Q9C0H9 1055 aa15.54■□□□□ 0.08
NOTCH3-206ENST00000601011 TULP4Q9NRJ4 1543 aa15.54■□□□□ 0.08
NOTCH3-206ENST00000601011 SBNO2Q9Y2G9 1366 aa15.54■□□□□ 0.08
NOTCH3-206ENST00000601011 HSP90B1P14625 803 aaKnown RBP15.54■□□□□ 0.08
NOTCH3-206ENST00000601011 ALDH1L2Q3SY69 923 aa15.54■□□□□ 0.08
NOTCH3-206ENST00000601011 INTS3Q68E01 1043 aaKnown RBP15.54■□□□□ 0.08
NOTCH3-206ENST00000601011 NEXNQ0ZGT2 675 aa15.53■□□□□ 0.08
NOTCH3-206ENST00000601011 PLEKHO1Q53GL0 409 aaPredicted RBP15.53■□□□□ 0.08
NOTCH3-206ENST00000601011 TBC1D32Q96NH3 1257 aa15.53■□□□□ 0.08
NOTCH3-206ENST00000601011 CCDC8Q9H0W5 538 aaPredicted RBP15.53■□□□□ 0.08
NOTCH3-206ENST00000601011 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
NOTCH3-206ENST00000601011 HOXC9P31274 260 aa15.53■□□□□ 0.08
NOTCH3-206ENST00000601011 CWF19L2Q2TBE0 894 aaKnown RBP15.53■□□□□ 0.08
NOTCH3-206ENST00000601011 PA2G4Q9UQ80 394 aaKnown RBP15.53■□□□□ 0.08
NOTCH3-206ENST00000601011 NUCB1Q02818 461 aa15.52■□□□□ 0.08
NOTCH3-206ENST00000601011 FBXW7Q969H0 707 aa15.52■□□□□ 0.08
NOTCH3-206ENST00000601011 GCC1Q96CN9 775 aa15.52■□□□□ 0.08
NOTCH3-206ENST00000601011 TRAK2O60296 914 aa15.52■□□□□ 0.08
NOTCH3-206ENST00000601011 G3BP1Q13283 466 aaKnown RBP eCLIP15.52■□□□□ 0.08
NOTCH3-206ENST00000601011 KRT28Q7Z3Y7 464 aa15.52■□□□□ 0.08
NOTCH3-206ENST00000601011 SIRT2Q8IXJ6 389 aa15.52■□□□□ 0.07
NOTCH3-206ENST00000601011 KLHDC4Q8TBB5 520 aa15.52■□□□□ 0.07
NOTCH3-206ENST00000601011 LRRCC1Q9C099 1032 aa15.52■□□□□ 0.07
NOTCH3-206ENST00000601011 INO80Q9ULG1 1556 aaPredicted RBP15.52■□□□□ 0.07
NOTCH3-206ENST00000601011 SPG7Q9UQ90 795 aa15.51■□□□□ 0.07
NOTCH3-206ENST00000601011 MROH2AA6NES4 1674 aa15.51■□□□□ 0.07
NOTCH3-206ENST00000601011 STK3Q13188 491 aa15.51■□□□□ 0.07
NOTCH3-206ENST00000601011 TCEANC2Q96MN5 208 aa15.51■□□□□ 0.07
NOTCH3-206ENST00000601011 GLI2P10070 1586 aa15.51■□□□□ 0.07
NOTCH3-206ENST00000601011 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
NOTCH3-206ENST00000601011 TOMM22Q9NS69 142 aa15.51■□□□□ 0.07
NOTCH3-206ENST00000601011 PNMA6EA0A0J9YXQ4 647 aa15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 IL17REQ8NFR9 667 aa15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 ANKRD24Q8TF21 1146 aa15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 GDPD2Q9HCC8 539 aa15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 CT47B1P0C2W7 299 aaPredicted RBP15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 REC8O95072 547 aa15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 GNAI3P08754 354 aa15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 PIP4K2BP78356 416 aa15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 MSH6P52701 1360 aa15.5■□□□□ 0.07
NOTCH3-206ENST00000601011 TULP1O00294 542 aaPredicted RBP15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 SDSP20132 328 aa15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 NDUFB9Q9Y6M9 179 aa15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 GOLGA6L4A6NEF3 574 aa15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 PRPF40AO75400 957 aaKnown RBP15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 GCP02774 474 aa15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 CAVIN1Q6NZI2 390 aaKnown RBP15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 A2ML1A8K2U0 1454 aa15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
NOTCH3-206ENST00000601011 ADAMTS2O95450 1211 aa15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 BOLA2Q9H3K6 86 aa15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 ADGRB3O60242 1522 aa15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 SSFA2P28290 1259 aa15.48■□□□□ 0.07
NOTCH3-206ENST00000601011 PPP1R42Q7Z4L9 355 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms