RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	SHANK3	Q9BYB0	1731 aa		27.53	■■■□□ 2
GTPBP3-223	ENST00000600995	KAT6B	Q8WYB5	2073 aa		27.52	■■■□□ 2
GTPBP3-223	ENST00000600995	MTHFS	P49914	203 aa		27.52	■■■□□ 2
GTPBP3-223	ENST00000600995	CAMKK2	Q96RR4	588 aa		27.52	■■■□□ 2
GTPBP3-223	ENST00000600995	PLEKHG2	Q9H7P9	1386 aa		27.51	■■□□□ 1.99
GTPBP3-223	ENST00000600995	PLSCR1	O15162	318 aa		27.51	■■□□□ 1.99
GTPBP3-223	ENST00000600995	IGSF1	Q8N6C5	1336 aa		27.5	■■□□□ 1.99
GTPBP3-223	ENST00000600995	NHS	Q6T4R5	1651 aa		27.49	■■□□□ 1.99
GTPBP3-223	ENST00000600995	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	27.49	■■□□□ 1.99
GTPBP3-223	ENST00000600995	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.49	■■□□□ 1.99
GTPBP3-223	ENST00000600995	RGPD4	Q7Z3J3	1758 aa		27.49	■■□□□ 1.99
GTPBP3-223	ENST00000600995	EZH2	Q15910	746 aa	Known RBP	27.48	■■□□□ 1.99
GTPBP3-223	ENST00000600995	PKD1L3	Q7Z443	1732 aa		27.47	■■□□□ 1.99
GTPBP3-223	ENST00000600995	PCDH11X	Q9BZA7	1347 aa		27.47	■■□□□ 1.99
GTPBP3-223	ENST00000600995	PCDH11Y	Q9BZA8	1340 aa		27.47	■■□□□ 1.99
GTPBP3-223	ENST00000600995	IL13	P35225	146 aa		27.46	■■□□□ 1.99
GTPBP3-223	ENST00000600995	SPG7	Q9UQ90	795 aa		27.46	■■□□□ 1.99
GTPBP3-223	ENST00000600995	KCNQ2	O43526	872 aa		27.44	■■□□□ 1.98
GTPBP3-223	ENST00000600995	PTF1A	Q7RTS3	328 aa		27.44	■■□□□ 1.98
GTPBP3-223	ENST00000600995	ACSBG1	Q96GR2	724 aa		27.44	■■□□□ 1.98
GTPBP3-223	ENST00000600995	RREB1	Q92766	1687 aa		27.43	■■□□□ 1.98
GTPBP3-223	ENST00000600995	CNGB1	Q14028	1251 aa	Predicted RBP	27.43	■■□□□ 1.98
GTPBP3-223	ENST00000600995	DIAPH1	O60610	1272 aa	Known RBP	27.4	■■□□□ 1.98
GTPBP3-223	ENST00000600995	BTAF1	O14981	1849 aa		27.39	■■□□□ 1.98
GTPBP3-223	ENST00000600995	CYP27B1	O15528	508 aa		27.39	■■□□□ 1.98
GTPBP3-223	ENST00000600995	DOT1L	Q8TEK3	1739 aa		27.38	■■□□□ 1.97
GTPBP3-223	ENST00000600995	KDR	P35968	1356 aa		27.38	■■□□□ 1.97
GTPBP3-223	ENST00000600995	NKX1-1	Q15270	411 aa	Predicted RBP	27.38	■■□□□ 1.97
GTPBP3-223	ENST00000600995	SULT6B1	Q6IMI4	303 aa		27.37	■■□□□ 1.97
GTPBP3-223	ENST00000600995	NUP188	Q5SRE5	1749 aa		27.36	■■□□□ 1.97
GTPBP3-223	ENST00000600995	PRIM1	P49642	420 aa	Known RBP	27.36	■■□□□ 1.97
GTPBP3-223	ENST00000600995	AMOT	Q4VCS5	1084 aa		27.36	■■□□□ 1.97
GTPBP3-223	ENST00000600995	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.36	■■□□□ 1.97
GTPBP3-223	ENST00000600995	PPP2R1A	P30153	589 aa		27.35	■■□□□ 1.97
GTPBP3-223	ENST00000600995	DDX10	Q13206	875 aa	Known RBP	27.35	■■□□□ 1.97
GTPBP3-223	ENST00000600995	IFNL2	Q8IZJ0	200 aa		27.35	■■□□□ 1.97
GTPBP3-223	ENST00000600995	CFAP53	Q96M91	514 aa		27.35	■■□□□ 1.97
GTPBP3-223	ENST00000600995	NBPF14	Q5TI25	921 aa		27.34	■■□□□ 1.97
GTPBP3-223	ENST00000600995	COL3A1	P02461	1466 aa	Predicted RBP	27.33	■■□□□ 1.97
GTPBP3-223	ENST00000600995	AEBP1	Q8IUX7	1158 aa		27.33	■■□□□ 1.97
GTPBP3-223	ENST00000600995	PROM2	Q8N271	834 aa		27.33	■■□□□ 1.97
GTPBP3-223	ENST00000600995	SYTL4	Q96C24	671 aa	Predicted RBP	27.33	■■□□□ 1.97
GTPBP3-223	ENST00000600995	PHKG2	P15735	406 aa		27.32	■■□□□ 1.96
GTPBP3-223	ENST00000600995	TXNRD1	Q16881	649 aa		27.31	■■□□□ 1.96
GTPBP3-223	ENST00000600995	ITGB4	P16144	1822 aa		27.3	■■□□□ 1.96
GTPBP3-223	ENST00000600995	HSP90AB1	P08238	724 aa	Known RBP	27.29	■■□□□ 1.96
GTPBP3-223	ENST00000600995	RALBP1	Q15311	655 aa		27.27	■■□□□ 1.96
GTPBP3-223	ENST00000600995	TOGARAM1	Q9Y4F4	1720 aa		27.27	■■□□□ 1.96
GTPBP3-223	ENST00000600995	NUDC	Q9Y266	331 aa		27.26	■■□□□ 1.95
GTPBP3-223	ENST00000600995	HMOX1	P09601	288 aa		27.25	■■□□□ 1.95
GTPBP3-223	ENST00000600995	SLC27A3	Q5K4L6	730 aa		27.25	■■□□□ 1.95
GTPBP3-223	ENST00000600995	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.25	■■□□□ 1.95
GTPBP3-223	ENST00000600995	LY75	O60449	1722 aa		27.24	■■□□□ 1.95
GTPBP3-223	ENST00000600995	U2SURP	O15042	1029 aa	Known RBP	27.24	■■□□□ 1.95
GTPBP3-223	ENST00000600995	R3HDM1	Q15032	1099 aa	Known RBP	27.24	■■□□□ 1.95
GTPBP3-223	ENST00000600995	DCAF5	Q96JK2	942 aa		27.24	■■□□□ 1.95
GTPBP3-223	ENST00000600995	PSD	A5PKW4	1024 aa	Predicted RBP	27.23	■■□□□ 1.95
GTPBP3-223	ENST00000600995	C1orf141	Q5JVX7	400 aa		27.23	■■□□□ 1.95
GTPBP3-223	ENST00000600995	MPRIP	Q6WCQ1	1025 aa		27.23	■■□□□ 1.95
GTPBP3-223	ENST00000600995	ERVV-2	B6SEH9	535 aa		27.21	■■□□□ 1.95
GTPBP3-223	ENST00000600995	HMGB2	P26583	209 aa	Known RBP	27.21	■■□□□ 1.95
GTPBP3-223	ENST00000600995	SMARCC1	Q92922	1105 aa	Predicted RBP	27.2	■■□□□ 1.94
GTPBP3-223	ENST00000600995	PIGB	Q92521	554 aa		27.19	■■□□□ 1.94
GTPBP3-223	ENST00000600995	TMOD3	Q9NYL9	352 aa		27.19	■■□□□ 1.94
GTPBP3-223	ENST00000600995	AKAP4	Q5JQC9	854 aa		27.18	■■□□□ 1.94
GTPBP3-223	ENST00000600995	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.17	■■□□□ 1.94
GTPBP3-223	ENST00000600995	LRRC4B	Q9NT99	713 aa		27.17	■■□□□ 1.94
GTPBP3-223	ENST00000600995	STK32B	Q9NY57	414 aa		27.17	■■□□□ 1.94
GTPBP3-223	ENST00000600995	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.16	■■□□□ 1.94
GTPBP3-223	ENST00000600995	PAPPA	Q13219	1627 aa		27.16	■■□□□ 1.94
GTPBP3-223	ENST00000600995	SCN11A	Q9UI33	1791 aa		27.15	■■□□□ 1.94
GTPBP3-223	ENST00000600995	SLC15A2	Q16348	729 aa		27.15	■■□□□ 1.94
GTPBP3-223	ENST00000600995	FCHSD2	O94868	740 aa		27.14	■■□□□ 1.94
GTPBP3-223	ENST00000600995	MTHFSD	Q2M296	383 aa	Known RBP	27.14	■■□□□ 1.94
GTPBP3-223	ENST00000600995	KDM6A	O15550	1401 aa	Predicted RBP	27.14	■■□□□ 1.93
GTPBP3-223	ENST00000600995	PALLD	Q8WX93	1383 aa		27.13	■■□□□ 1.93
GTPBP3-223	ENST00000600995	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.13	■■□□□ 1.93
GTPBP3-223	ENST00000600995	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.13	■■□□□ 1.93
GTPBP3-223	ENST00000600995	RSPH6A	Q9H0K4	717 aa		27.13	■■□□□ 1.93
GTPBP3-223	ENST00000600995	CCNL1	Q9UK58	526 aa	Predicted RBP	27.13	■■□□□ 1.93
GTPBP3-223	ENST00000600995	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.12	■■□□□ 1.93
GTPBP3-223	ENST00000600995	VIRMA	Q69YN4	1812 aa	Known RBP	27.11	■■□□□ 1.93
GTPBP3-223	ENST00000600995	CABP4	P57796	275 aa		27.11	■■□□□ 1.93
GTPBP3-223	ENST00000600995	GAS2L2	Q8NHY3	880 aa		27.11	■■□□□ 1.93
GTPBP3-223	ENST00000600995	PRKAR2B	P31323	418 aa		27.09	■■□□□ 1.93
GTPBP3-223	ENST00000600995	LRP5	O75197	1615 aa		27.08	■■□□□ 1.93
GTPBP3-223	ENST00000600995	AKT1S1	Q96B36	256 aa		27.08	■■□□□ 1.93
GTPBP3-223	ENST00000600995	ASAP1	Q9ULH1	1129 aa		27.08	■■□□□ 1.93
GTPBP3-223	ENST00000600995	TAF1L	Q8IZX4	1826 aa		27.07	■■□□□ 1.92
GTPBP3-223	ENST00000600995	PRKRIP1	Q9H875	184 aa	Predicted RBP	27.07	■■□□□ 1.92
GTPBP3-223	ENST00000600995	ATG3	Q9NT62	314 aa		27.07	■■□□□ 1.92
GTPBP3-223	ENST00000600995	ADAMTS7	Q9UKP4	1686 aa		27.07	■■□□□ 1.92
GTPBP3-223	ENST00000600995	QSER1	Q2KHR3	1735 aa		27.07	■■□□□ 1.92
GTPBP3-223	ENST00000600995	RNMT	O43148	476 aa	Known RBP	27.06	■■□□□ 1.92
GTPBP3-223	ENST00000600995	NFATC2IP	Q8NCF5	419 aa		27.06	■■□□□ 1.92
GTPBP3-223	ENST00000600995	C5	P01031	1676 aa		27.05	■■□□□ 1.92
GTPBP3-223	ENST00000600995	CASZ1	Q86V15	1759 aa		27.05	■■□□□ 1.92
GTPBP3-223	ENST00000600995	KCNQ4	P56696	695 aa		27.05	■■□□□ 1.92
GTPBP3-223	ENST00000600995	PHACTR3	Q96KR7	559 aa		27.05	■■□□□ 1.92
GTPBP3-223	ENST00000600995	LGR6	Q9HBX8	967 aa		27.05	■■□□□ 1.92

Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms