RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 BAG6P46379 1132 aa21.5■■□□□ 1.03
RPS28-203ENST00000600659 EN1Q05925 392 aaPredicted RBP21.5■■□□□ 1.03
RPS28-203ENST00000600659 CAMKK2Q96RR4 588 aa21.49■■□□□ 1.03
RPS28-203ENST00000600659 COL3A1P02461 1466 aaPredicted RBP21.49■■□□□ 1.03
RPS28-203ENST00000600659 IGSF1Q8N6C5 1336 aa21.48■■□□□ 1.03
RPS28-203ENST00000600659 KAT6BQ8WYB5 2073 aa21.48■■□□□ 1.03
RPS28-203ENST00000600659 TOGARAM1Q9Y4F4 1720 aa21.48■■□□□ 1.03
RPS28-203ENST00000600659 APBA3O96018 575 aa21.46■■□□□ 1.03
RPS28-203ENST00000600659 EZH2Q15910 746 aaKnown RBP21.46■■□□□ 1.03
RPS28-203ENST00000600659 ZCRB1Q8TBF4 217 aaKnown RBP21.46■■□□□ 1.03
RPS28-203ENST00000600659 BCL11BQ9C0K0 894 aaPredicted RBP21.46■■□□□ 1.03
RPS28-203ENST00000600659 KCNQ2O43526 872 aa21.45■■□□□ 1.02
RPS28-203ENST00000600659 RAPGEF4Q8WZA2 1011 aa21.45■■□□□ 1.02
RPS28-203ENST00000600659 PARD3Q8TEW0 1356 aa21.44■■□□□ 1.02
RPS28-203ENST00000600659 TATP17735 454 aaPredicted RBP21.44■■□□□ 1.02
RPS28-203ENST00000600659 MTHFSP49914 203 aa21.44■■□□□ 1.02
RPS28-203ENST00000600659 IL13P35225 146 aa21.43■■□□□ 1.02
RPS28-203ENST00000600659 DDX54Q8TDD1 881 aaKnown RBP21.43■■□□□ 1.02
RPS28-203ENST00000600659 ACSBG1Q96GR2 724 aa21.42■■□□□ 1.02
RPS28-203ENST00000600659 ITGB4P16144 1822 aa21.42■■□□□ 1.02
RPS28-203ENST00000600659 KDRP35968 1356 aa21.41■■□□□ 1.02
RPS28-203ENST00000600659 PLEKHG2Q9H7P9 1386 aa21.41■■□□□ 1.02
RPS28-203ENST00000600659 CYP27B1O15528 508 aa21.41■■□□□ 1.02
RPS28-203ENST00000600659 ZEB1P37275 1124 aaPredicted RBP21.41■■□□□ 1.02
RPS28-203ENST00000600659 PLSCR1O15162 318 aa21.4■■□□□ 1.02
RPS28-203ENST00000600659 CNGB1Q14028 1251 aaPredicted RBP21.4■■□□□ 1.02
RPS28-203ENST00000600659 AEBP1Q8IUX7 1158 aa21.39■■□□□ 1.01
RPS28-203ENST00000600659 PCDH11XQ9BZA7 1347 aa21.39■■□□□ 1.01
RPS28-203ENST00000600659 PCDH11YQ9BZA8 1340 aa21.39■■□□□ 1.01
RPS28-203ENST00000600659 LY75O60449 1722 aa21.38■■□□□ 1.01
RPS28-203ENST00000600659 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
RPS28-203ENST00000600659 PROM2Q8N271 834 aa21.37■■□□□ 1.01
RPS28-203ENST00000600659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.36■■□□□ 1.01
RPS28-203ENST00000600659 PPP2R1AP30153 589 aa21.33■■□□□ 1.01
RPS28-203ENST00000600659 NKX1-1Q15270 411 aaPredicted RBP21.33■■□□□ 1.01
RPS28-203ENST00000600659 VIRMAQ69YN4 1812 aaKnown RBP21.33■■□□□ 1.01
RPS28-203ENST00000600659 SRCAPQ6ZRS2 3230 aa21.33■■□□□ 1.01
RPS28-203ENST00000600659 PRIM1P49642 420 aaKnown RBP21.32■■□□□ 1
RPS28-203ENST00000600659 SULT6B1Q6IMI4 303 aa21.32■■□□□ 1
RPS28-203ENST00000600659 SPG7Q9UQ90 795 aa21.31■■□□□ 1
RPS28-203ENST00000600659 DIAPH1O60610 1272 aaKnown RBP21.3■■□□□ 1
RPS28-203ENST00000600659 PHKG2P15735 406 aa21.3■■□□□ 1
RPS28-203ENST00000600659 DDX10Q13206 875 aaKnown RBP21.3■■□□□ 1
RPS28-203ENST00000600659 TXNRD1Q16881 649 aa21.29■■□□□ 1
RPS28-203ENST00000600659 ANO8Q9HCE9 1232 aaPredicted RBP21.29■■□□□ 1
RPS28-203ENST00000600659 PSDA5PKW4 1024 aaPredicted RBP21.29■■□□□ 1
RPS28-203ENST00000600659 KDM6AO15550 1401 aaPredicted RBP21.28■■□□□ 1
RPS28-203ENST00000600659 SCN11AQ9UI33 1791 aa21.28■■□□□ 1
RPS28-203ENST00000600659 ADAMTS7Q9UKP4 1686 aa21.28■■□□□ 1
RPS28-203ENST00000600659 CASZ1Q86V15 1759 aa21.28■■□□□ 1
RPS28-203ENST00000600659 HMOX1P09601 288 aa21.27■□□□□ 0.99
RPS28-203ENST00000600659 IFNL2Q8IZJ0 200 aa21.27■□□□□ 0.99
RPS28-203ENST00000600659 TUBGCP6Q96RT7 1819 aa21.26■□□□□ 0.99
RPS28-203ENST00000600659 TAF1LQ8IZX4 1826 aa21.26■□□□□ 0.99
RPS28-203ENST00000600659 R3HDM1Q15032 1099 aaKnown RBP21.26■□□□□ 0.99
RPS28-203ENST00000600659 SYTL4Q96C24 671 aaPredicted RBP21.26■□□□□ 0.99
RPS28-203ENST00000600659 LRRC4BQ9NT99 713 aa21.26■□□□□ 0.99
RPS28-203ENST00000600659 LRP5O75197 1615 aa21.25■□□□□ 0.99
RPS28-203ENST00000600659 AMOTQ4VCS5 1084 aa21.24■□□□□ 0.99
RPS28-203ENST00000600659 PLEKHO1Q53GL0 409 aaPredicted RBP21.24■□□□□ 0.99
RPS28-203ENST00000600659 QSER1Q2KHR3 1735 aa21.23■□□□□ 0.99
RPS28-203ENST00000600659 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
RPS28-203ENST00000600659 C5P01031 1676 aa21.22■□□□□ 0.99
RPS28-203ENST00000600659 PIGBQ92521 554 aa21.22■□□□□ 0.99
RPS28-203ENST00000600659 MPRIPQ6WCQ1 1025 aa21.21■□□□□ 0.99
RPS28-203ENST00000600659 MRC1P22897 1456 aa21.2■□□□□ 0.98
RPS28-203ENST00000600659 U2SURPO15042 1029 aaKnown RBP21.19■□□□□ 0.98
RPS28-203ENST00000600659 CFAP53Q96M91 514 aa21.19■□□□□ 0.98
RPS28-203ENST00000600659 PALLDQ8WX93 1383 aa21.18■□□□□ 0.98
RPS28-203ENST00000600659 KCNQ4P56696 695 aa21.18■□□□□ 0.98
RPS28-203ENST00000600659 MTHFSDQ2M296 383 aaKnown RBP21.18■□□□□ 0.98
RPS28-203ENST00000600659 NBPF14Q5TI25 921 aa21.18■□□□□ 0.98
RPS28-203ENST00000600659 DCAF5Q96JK2 942 aa21.18■□□□□ 0.98
RPS28-203ENST00000600659 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
RPS28-203ENST00000600659 RALBP1Q15311 655 aa21.17■□□□□ 0.98
RPS28-203ENST00000600659 ZNF827Q17R98 1081 aa21.17■□□□□ 0.98
RPS28-203ENST00000600659 SLC27A3Q5K4L6 730 aa21.17■□□□□ 0.98
RPS28-203ENST00000600659 SIPA1L3O60292 1781 aaPredicted RBP21.16■□□□□ 0.98
RPS28-203ENST00000600659 ZNF831Q5JPB2 1677 aa21.16■□□□□ 0.98
RPS28-203ENST00000600659 HSP90AB1P08238 724 aaKnown RBP21.16■□□□□ 0.98
RPS28-203ENST00000600659 SLC15A2Q16348 729 aa21.16■□□□□ 0.98
RPS28-203ENST00000600659 ERVV-2B6SEH9 535 aa21.15■□□□□ 0.98
RPS28-203ENST00000600659 AKAP4Q5JQC9 854 aa21.15■□□□□ 0.98
RPS28-203ENST00000600659 AKT1S1Q96B36 256 aa21.15■□□□□ 0.98
RPS28-203ENST00000600659 PDGFDQ9GZP0 370 aaPredicted RBP21.15■□□□□ 0.98
RPS28-203ENST00000600659 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
RPS28-203ENST00000600659 C1orf141Q5JVX7 400 aa21.14■□□□□ 0.97
RPS28-203ENST00000600659 CICQ96RK0 1608 aaPredicted RBP21.13■□□□□ 0.97
RPS28-203ENST00000600659 PHACTR3Q96KR7 559 aa21.13■□□□□ 0.97
RPS28-203ENST00000600659 CCNL1Q9UK58 526 aaPredicted RBP21.13■□□□□ 0.97
RPS28-203ENST00000600659 ASAP1Q9ULH1 1129 aa21.13■□□□□ 0.97
RPS28-203ENST00000600659 C4BP0C0L5 1744 aa21.13■□□□□ 0.97
RPS28-203ENST00000600659 COL5A3P25940 1745 aaPredicted RBP21.13■□□□□ 0.97
RPS28-203ENST00000600659 DLG5Q8TDM6 1919 aa21.13■□□□□ 0.97
RPS28-203ENST00000600659 UBR3Q6ZT12 1888 aa21.12■□□□□ 0.97
RPS28-203ENST00000600659 ZNF316A6NFI3 1004 aaPredicted RBP21.12■□□□□ 0.97
RPS28-203ENST00000600659 PRKAR2BP31323 418 aa21.12■□□□□ 0.97
RPS28-203ENST00000600659 ATG3Q9NT62 314 aa21.12■□□□□ 0.97
RPS28-203ENST00000600659 MYBBP1AQ9BQG0 1328 aaKnown RBP21.12■□□□□ 0.97
RPS28-203ENST00000600659 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms