RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CHL1O00533 1208 aa14.37□□□□□ -0.11
ARHGEF1-220ENST00000600274 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
ARHGEF1-220ENST00000600274 LRRC59Q96AG4 307 aaKnown RBP14.37□□□□□ -0.11
ARHGEF1-220ENST00000600274 CDC42BPGQ6DT37 1551 aa14.37□□□□□ -0.11
ARHGEF1-220ENST00000600274 HSP90AB1P08238 724 aaKnown RBP14.37□□□□□ -0.11
ARHGEF1-220ENST00000600274 KIF13AQ9H1H9 1805 aa14.36□□□□□ -0.11
ARHGEF1-220ENST00000600274 ANXA1P04083 346 aa14.36□□□□□ -0.11
ARHGEF1-220ENST00000600274 GCC1Q96CN9 775 aa14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 EXOC6BQ9Y2D4 811 aa14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 HOXC9P31274 260 aa14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 GAS2L2Q8NHY3 880 aa14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 FLT4P35916 1363 aa14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 REREQ9P2R6 1566 aa14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 ARHGAP45Q92619 1136 aa14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 ORAI2Q96SN7 254 aa14.35□□□□□ -0.11
ARHGEF1-220ENST00000600274 ABCC4O15439 1325 aa14.34□□□□□ -0.11
ARHGEF1-220ENST00000600274 SETD1BQ9UPS6 1966 aaKnown RBP14.34□□□□□ -0.11
ARHGEF1-220ENST00000600274 MSH6P52701 1360 aa14.34□□□□□ -0.11
ARHGEF1-220ENST00000600274 GNAT3A8MTJ3 354 aa14.34□□□□□ -0.11
ARHGEF1-220ENST00000600274 HAP1P54257 671 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF1-220ENST00000600274 TBC1D9Q6ZT07 1266 aa14.34□□□□□ -0.11
ARHGEF1-220ENST00000600274 TECPR2O15040 1411 aa14.34□□□□□ -0.11
ARHGEF1-220ENST00000600274 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
ARHGEF1-220ENST00000600274 ZC3H6P61129 1189 aaKnown RBP14.32□□□□□ -0.12
ARHGEF1-220ENST00000600274 MPRIPQ6WCQ1 1025 aa14.32□□□□□ -0.12
ARHGEF1-220ENST00000600274 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF1-220ENST00000600274 ANKRD26Q9UPS8 1709 aa14.32□□□□□ -0.12
ARHGEF1-220ENST00000600274 OVOS2A0A0J9YW53 1432 aa14.31□□□□□ -0.12
ARHGEF1-220ENST00000600274 OVOS2Q6IE36 1432 aa14.31□□□□□ -0.12
ARHGEF1-220ENST00000600274 HDGFL1Q5TGJ6 251 aa14.31□□□□□ -0.12
ARHGEF1-220ENST00000600274 SBNO1A3KN83 1393 aa14.31□□□□□ -0.12
ARHGEF1-220ENST00000600274 DDX17Q92841 729 aaKnown RBP14.31□□□□□ -0.12
ARHGEF1-220ENST00000600274 CEP85Q6P2H3 762 aa14.3□□□□□ -0.12
ARHGEF1-220ENST00000600274 IL17REQ8NFR9 667 aa14.3□□□□□ -0.12
ARHGEF1-220ENST00000600274 SETD1AO15047 1707 aaKnown RBP14.3□□□□□ -0.12
ARHGEF1-220ENST00000600274 TEFQ10587 303 aa14.3□□□□□ -0.12
ARHGEF1-220ENST00000600274 FLIIQ13045 1269 aa14.3□□□□□ -0.12
ARHGEF1-220ENST00000600274 LGR6Q9HBX8 967 aa14.3□□□□□ -0.12
ARHGEF1-220ENST00000600274 UBR1Q8IWV7 1749 aa14.3□□□□□ -0.12
ARHGEF1-220ENST00000600274 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 PIK3R4Q99570 1358 aa14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 BMP2KLQ5H9B9 411 aa14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 NBPF6Q5VWK0 638 aa14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 PROSER2Q86WR7 435 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 NBPF4Q96M43 638 aa14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF1-220ENST00000600274 GSPT1P15170 499 aaKnown RBP14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 KCNQ3O43525 872 aa14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 PLEKHM2Q8IWE5 1019 aa14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 IL1RAPL2Q9NP60 686 aa14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 CDC45O75419 566 aa14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 CCDC30Q5VVM6 783 aa14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 INTS3Q68E01 1043 aaKnown RBP14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 ANKRD44Q8N8A2 993 aa14.28□□□□□ -0.12
ARHGEF1-220ENST00000600274 PTCH1Q13635 1447 aa14.27□□□□□ -0.12
ARHGEF1-220ENST00000600274 HMMRO75330 724 aa14.27□□□□□ -0.13
ARHGEF1-220ENST00000600274 BRPF1P55201 1214 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF1-220ENST00000600274 ITSN1Q15811 1721 aa14.27□□□□□ -0.13
ARHGEF1-220ENST00000600274 MAP4K4O95819 1239 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF1-220ENST00000600274 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF1-220ENST00000600274 DCTPP1Q9H773 170 aa14.27□□□□□ -0.13
ARHGEF1-220ENST00000600274 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.13
ARHGEF1-220ENST00000600274 IGSF1Q8N6C5 1336 aa14.26□□□□□ -0.13
ARHGEF1-220ENST00000600274 CD2BP2O95400 341 aaKnown RBP14.26□□□□□ -0.13
ARHGEF1-220ENST00000600274 GNAI2P04899 355 aa14.26□□□□□ -0.13
ARHGEF1-220ENST00000600274 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
ARHGEF1-220ENST00000600274 VSIG10Q8N0Z9 540 aa14.26□□□□□ -0.13
ARHGEF1-220ENST00000600274 CSB-PGBD3P0DP91 1061 aa14.25□□□□□ -0.13
ARHGEF1-220ENST00000600274 FOXD4L5Q5VV16 416 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF1-220ENST00000600274 RPAP2Q8IXW5 612 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF1-220ENST00000600274 FOXD4L4Q8WXT5 416 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF1-220ENST00000600274 PTPRCP08575 1304 aa14.25□□□□□ -0.13
ARHGEF1-220ENST00000600274 ARHGEF10O15013 1369 aa14.25□□□□□ -0.13
ARHGEF1-220ENST00000600274 CEP170BQ9Y4F5 1589 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF1-220ENST00000600274 SDSP20132 328 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 OS9Q13438 667 aaPredicted RBP14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 CABLES1Q8TDN4 633 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 USP31Q70CQ4 1352 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 PNMA6EA0A0J9YXQ4 647 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 RTL1A6NKG5 1358 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 NAP1L5Q96NT1 182 aaPredicted RBP14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 RIMS1Q86UR5 1692 aaKnown RBP14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 CASC1Q6TDU7 716 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 CHMP5Q9NZZ3 219 aa14.24□□□□□ -0.13
ARHGEF1-220ENST00000600274 UBTFL1P0CB47 393 aaPredicted RBP14.23□□□□□ -0.13
ARHGEF1-220ENST00000600274 TTC22Q5TAA0 569 aa14.23□□□□□ -0.13
ARHGEF1-220ENST00000600274 CRB1P82279 1406 aa14.23□□□□□ -0.13
ARHGEF1-220ENST00000600274 BTBD11A6QL63 1104 aa14.23□□□□□ -0.13
ARHGEF1-220ENST00000600274 CHPF2Q9P2E5 772 aa14.23□□□□□ -0.13
ARHGEF1-220ENST00000600274 DIP2AQ14689 1571 aa14.23□□□□□ -0.13
ARHGEF1-220ENST00000600274 GCP02774 474 aa14.22□□□□□ -0.13
ARHGEF1-220ENST00000600274 PKNOX2Q96KN3 472 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms