RNA–Protein interactions for RNA: ENST00000600005.5

FKRP-217, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-217ENST00000600005 NCAPD2Q15021 1401 aa26.56■■□□□ 1.84
FKRP-217ENST00000600005 BCL11BQ9C0K0 894 aaPredicted RBP26.56■■□□□ 1.84
FKRP-217ENST00000600005 SHANK3Q9BYB0 1731 aa26.54■■□□□ 1.84
FKRP-217ENST00000600005 DDX10Q13206 875 aaKnown RBP26.54■■□□□ 1.84
FKRP-217ENST00000600005 ACSBG1Q96GR2 724 aa26.54■■□□□ 1.84
FKRP-217ENST00000600005 IGSF1Q8N6C5 1336 aa26.54■■□□□ 1.84
FKRP-217ENST00000600005 EZH2Q15910 746 aaKnown RBP26.52■■□□□ 1.84
FKRP-217ENST00000600005 PCDH11XQ9BZA7 1347 aa26.51■■□□□ 1.83
FKRP-217ENST00000600005 PCDH11YQ9BZA8 1340 aa26.51■■□□□ 1.83
FKRP-217ENST00000600005 IL13P35225 146 aa26.51■■□□□ 1.83
FKRP-217ENST00000600005 PTF1AQ7RTS3 328 aa26.51■■□□□ 1.83
FKRP-217ENST00000600005 SPG7Q9UQ90 795 aa26.51■■□□□ 1.83
FKRP-217ENST00000600005 KCNQ2O43526 872 aa26.5■■□□□ 1.83
FKRP-217ENST00000600005 CAMKK2Q96RR4 588 aa26.5■■□□□ 1.83
FKRP-217ENST00000600005 NHSQ6T4R5 1651 aa26.49■■□□□ 1.83
FKRP-217ENST00000600005 PKD1L3Q7Z443 1732 aa26.48■■□□□ 1.83
FKRP-217ENST00000600005 DIAPH1O60610 1272 aaKnown RBP26.48■■□□□ 1.83
FKRP-217ENST00000600005 PARD3Q8TEW0 1356 aa26.47■■□□□ 1.83
FKRP-217ENST00000600005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.47■■□□□ 1.83
FKRP-217ENST00000600005 PLSCR1O15162 318 aa26.46■■□□□ 1.83
FKRP-217ENST00000600005 SULT6B1Q6IMI4 303 aa26.46■■□□□ 1.83
FKRP-217ENST00000600005 PPP2R1AP30153 589 aa26.45■■□□□ 1.82
FKRP-217ENST00000600005 SYTL4Q96C24 671 aaPredicted RBP26.45■■□□□ 1.82
FKRP-217ENST00000600005 CFAP53Q96M91 514 aa26.45■■□□□ 1.82
FKRP-217ENST00000600005 CYP27B1O15528 508 aa26.44■■□□□ 1.82
FKRP-217ENST00000600005 AEBP1Q8IUX7 1158 aa26.44■■□□□ 1.82
FKRP-217ENST00000600005 DOT1LQ8TEK3 1739 aa26.44■■□□□ 1.82
FKRP-217ENST00000600005 PRIM1P49642 420 aaKnown RBP26.43■■□□□ 1.82
FKRP-217ENST00000600005 PLEKHO1Q53GL0 409 aaPredicted RBP26.42■■□□□ 1.82
FKRP-217ENST00000600005 RGPD3A6NKT7 1758 aaPredicted RBP26.42■■□□□ 1.82
FKRP-217ENST00000600005 RGPD4Q7Z3J3 1758 aa26.42■■□□□ 1.82
FKRP-217ENST00000600005 PLEKHG2Q9H7P9 1386 aa26.42■■□□□ 1.82
FKRP-217ENST00000600005 BTAF1O14981 1849 aa26.42■■□□□ 1.82
FKRP-217ENST00000600005 IFNL2Q8IZJ0 200 aa26.4■■□□□ 1.82
FKRP-217ENST00000600005 RREB1Q92766 1687 aa26.4■■□□□ 1.82
FKRP-217ENST00000600005 COL3A1P02461 1466 aaPredicted RBP26.39■■□□□ 1.82
FKRP-217ENST00000600005 KDRP35968 1356 aa26.39■■□□□ 1.82
FKRP-217ENST00000600005 U2SURPO15042 1029 aaKnown RBP26.39■■□□□ 1.82
FKRP-217ENST00000600005 HMOX1P09601 288 aa26.39■■□□□ 1.82
FKRP-217ENST00000600005 AMOTQ4VCS5 1084 aa26.39■■□□□ 1.82
FKRP-217ENST00000600005 PHKG2P15735 406 aa26.37■■□□□ 1.81
FKRP-217ENST00000600005 NKX1-1Q15270 411 aaPredicted RBP26.37■■□□□ 1.81
FKRP-217ENST00000600005 NUP188Q5SRE5 1749 aa26.36■■□□□ 1.81
FKRP-217ENST00000600005 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
FKRP-217ENST00000600005 RALBP1Q15311 655 aa26.35■■□□□ 1.81
FKRP-217ENST00000600005 NBPF14Q5TI25 921 aa26.35■■□□□ 1.81
FKRP-217ENST00000600005 ZNF530Q6P9A1 599 aaPredicted RBP26.35■■□□□ 1.81
FKRP-217ENST00000600005 NUDCQ9Y266 331 aa26.35■■□□□ 1.81
FKRP-217ENST00000600005 TXNRD1Q16881 649 aa26.34■■□□□ 1.81
FKRP-217ENST00000600005 PROM2Q8N271 834 aa26.33■■□□□ 1.81
FKRP-217ENST00000600005 ITGB4P16144 1822 aa26.32■■□□□ 1.8
FKRP-217ENST00000600005 HSP90AB1P08238 724 aaKnown RBP26.32■■□□□ 1.8
FKRP-217ENST00000600005 C1orf141Q5JVX7 400 aa26.32■■□□□ 1.8
FKRP-217ENST00000600005 MPRIPQ6WCQ1 1025 aa26.32■■□□□ 1.8
FKRP-217ENST00000600005 PSDA5PKW4 1024 aaPredicted RBP26.31■■□□□ 1.8
FKRP-217ENST00000600005 TOGARAM1Q9Y4F4 1720 aa26.31■■□□□ 1.8
FKRP-217ENST00000600005 R3HDM1Q15032 1099 aaKnown RBP26.3■■□□□ 1.8
FKRP-217ENST00000600005 DCAF5Q96JK2 942 aa26.28■■□□□ 1.8
FKRP-217ENST00000600005 U2AF1L5P0DN76 240 aaPredicted RBP26.27■■□□□ 1.8
FKRP-217ENST00000600005 U2AF1Q01081 240 aaKnown RBP eCLIP26.27■■□□□ 1.8
FKRP-217ENST00000600005 TMOD3Q9NYL9 352 aa26.26■■□□□ 1.79
FKRP-217ENST00000600005 PIGBQ92521 554 aa26.25■■□□□ 1.79
FKRP-217ENST00000600005 AKAP4Q5JQC9 854 aa26.24■■□□□ 1.79
FKRP-217ENST00000600005 SLC27A3Q5K4L6 730 aa26.24■■□□□ 1.79
FKRP-217ENST00000600005 LY75O60449 1722 aa26.23■■□□□ 1.79
FKRP-217ENST00000600005 MYBBP1AQ9BQG0 1328 aaKnown RBP26.23■■□□□ 1.79
FKRP-217ENST00000600005 ERVV-2B6SEH9 535 aa26.23■■□□□ 1.79
FKRP-217ENST00000600005 MTHFSDQ2M296 383 aaKnown RBP26.23■■□□□ 1.79
FKRP-217ENST00000600005 SMARCC1Q92922 1105 aaPredicted RBP26.22■■□□□ 1.79
FKRP-217ENST00000600005 PRKAR2BP31323 418 aa26.21■■□□□ 1.79
FKRP-217ENST00000600005 RSPH6AQ9H0K4 717 aa26.21■■□□□ 1.79
FKRP-217ENST00000600005 ANO8Q9HCE9 1232 aaPredicted RBP26.21■■□□□ 1.79
FKRP-217ENST00000600005 LRRC4BQ9NT99 713 aa26.21■■□□□ 1.79
FKRP-217ENST00000600005 STK32BQ9NY57 414 aa26.21■■□□□ 1.79
FKRP-217ENST00000600005 FCHSD2O94868 740 aa26.2■■□□□ 1.78
FKRP-217ENST00000600005 CABP4P57796 275 aa26.2■■□□□ 1.78
FKRP-217ENST00000600005 CCNL1Q9UK58 526 aaPredicted RBP26.2■■□□□ 1.78
FKRP-217ENST00000600005 KDM6AO15550 1401 aaPredicted RBP26.2■■□□□ 1.78
FKRP-217ENST00000600005 PALLDQ8WX93 1383 aa26.2■■□□□ 1.78
FKRP-217ENST00000600005 KCNQ4P56696 695 aa26.19■■□□□ 1.78
FKRP-217ENST00000600005 PRKRIP1Q9H875 184 aaPredicted RBP26.19■■□□□ 1.78
FKRP-217ENST00000600005 SCN11AQ9UI33 1791 aa26.18■■□□□ 1.78
FKRP-217ENST00000600005 GAS2L2Q8NHY3 880 aa26.18■■□□□ 1.78
FKRP-217ENST00000600005 SLC15A2Q16348 729 aa26.17■■□□□ 1.78
FKRP-217ENST00000600005 ASAP1Q9ULH1 1129 aa26.16■■□□□ 1.78
FKRP-217ENST00000600005 VIRMAQ69YN4 1812 aaKnown RBP26.16■■□□□ 1.78
FKRP-217ENST00000600005 PHACTR3Q96KR7 559 aa26.15■■□□□ 1.78
FKRP-217ENST00000600005 LGR6Q9HBX8 967 aa26.15■■□□□ 1.78
FKRP-217ENST00000600005 RNMTO43148 476 aaKnown RBP26.14■■□□□ 1.78
FKRP-217ENST00000600005 NFATC2IPQ8NCF5 419 aa26.14■■□□□ 1.78
FKRP-217ENST00000600005 PAPPAQ13219 1627 aa26.14■■□□□ 1.77
FKRP-217ENST00000600005 NEFMP07197 916 aa26.13■■□□□ 1.77
FKRP-217ENST00000600005 HMGB2P26583 209 aaKnown RBP26.13■■□□□ 1.77
FKRP-217ENST00000600005 ATG3Q9NT62 314 aa26.13■■□□□ 1.77
FKRP-217ENST00000600005 GNAT3A8MTJ3 354 aa26.12■■□□□ 1.77
FKRP-217ENST00000600005 MAP3K5Q99683 1374 aa26.11■■□□□ 1.77
FKRP-217ENST00000600005 PNNQ9H307 717 aaKnown RBP26.11■■□□□ 1.77
FKRP-217ENST00000600005 LOC102724428A0A0B4J2F2 783 aa26.1■■□□□ 1.77
FKRP-217ENST00000600005 SIK1P57059 783 aa26.1■■□□□ 1.77
FKRP-217ENST00000600005 ZNF827Q17R98 1081 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms