RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 HSP90AB1P08238 724 aaKnown RBP13.41□□□□□ -0.26
ZNF544-215ENST00000599953 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
ZNF544-215ENST00000599953 PTPRUQ92729 1446 aa13.4□□□□□ -0.26
ZNF544-215ENST00000599953 DIP2AQ14689 1571 aa13.4□□□□□ -0.26
ZNF544-215ENST00000599953 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.26
ZNF544-215ENST00000599953 AMOTL2Q9Y2J4 779 aa13.4□□□□□ -0.26
ZNF544-215ENST00000599953 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.27
ZNF544-215ENST00000599953 SLC26A8Q96RN1 970 aa13.39□□□□□ -0.27
ZNF544-215ENST00000599953 RGS12O14924 1447 aa13.39□□□□□ -0.27
ZNF544-215ENST00000599953 CRB1P82279 1406 aa13.39□□□□□ -0.27
ZNF544-215ENST00000599953 FMN2Q9NZ56 1722 aa13.39□□□□□ -0.27
ZNF544-215ENST00000599953 MAP3K19Q56UN5 1328 aa13.39□□□□□ -0.27
ZNF544-215ENST00000599953 NGDNQ8NEJ9 315 aaKnown RBP13.39□□□□□ -0.27
ZNF544-215ENST00000599953 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
ZNF544-215ENST00000599953 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
ZNF544-215ENST00000599953 KDRP35968 1356 aa13.38□□□□□ -0.27
ZNF544-215ENST00000599953 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
ZNF544-215ENST00000599953 HMMRO75330 724 aa13.38□□□□□ -0.27
ZNF544-215ENST00000599953 AMPHP49418 695 aa13.38□□□□□ -0.27
ZNF544-215ENST00000599953 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
ZNF544-215ENST00000599953 MSH6P52701 1360 aa13.38□□□□□ -0.27
ZNF544-215ENST00000599953 SOX12O15370 315 aa13.37□□□□□ -0.27
ZNF544-215ENST00000599953 HSP90AA1P07900 732 aaKnown RBP13.37□□□□□ -0.27
ZNF544-215ENST00000599953 TTC22Q5TAA0 569 aa13.37□□□□□ -0.27
ZNF544-215ENST00000599953 CEP85Q6P2H3 762 aa13.37□□□□□ -0.27
ZNF544-215ENST00000599953 TSPYL4Q9UJ04 414 aa13.37□□□□□ -0.27
ZNF544-215ENST00000599953 HTATSF1O43719 755 aaKnown RBP13.37□□□□□ -0.27
ZNF544-215ENST00000599953 PTMSP20962 102 aa13.37□□□□□ -0.27
ZNF544-215ENST00000599953 DDIT3P35638 169 aa13.37□□□□□ -0.27
ZNF544-215ENST00000599953 KRT24Q2M2I5 525 aa13.37□□□□□ -0.27
ZNF544-215ENST00000599953 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
ZNF544-215ENST00000599953 RIMS1Q86UR5 1692 aaKnown RBP13.37□□□□□ -0.27
ZNF544-215ENST00000599953 ANKARQ7Z5J8 1434 aa13.36□□□□□ -0.27
ZNF544-215ENST00000599953 K7ELQ4 463 aaPredicted RBP13.36□□□□□ -0.27
ZNF544-215ENST00000599953 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
ZNF544-215ENST00000599953 CCT4P50991 539 aaKnown RBP13.36□□□□□ -0.27
ZNF544-215ENST00000599953 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
ZNF544-215ENST00000599953 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
ZNF544-215ENST00000599953 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
ZNF544-215ENST00000599953 MTHFSDQ2M296 383 aaKnown RBP13.36□□□□□ -0.27
ZNF544-215ENST00000599953 GBP4Q96PP9 640 aa13.36□□□□□ -0.27
ZNF544-215ENST00000599953 KIF2CQ99661 725 aa13.36□□□□□ -0.27
ZNF544-215ENST00000599953 TRAK2O60296 914 aa13.34□□□□□ -0.27
ZNF544-215ENST00000599953 CEBPAP49715 358 aaPredicted RBP13.34□□□□□ -0.27
ZNF544-215ENST00000599953 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
ZNF544-215ENST00000599953 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
ZNF544-215ENST00000599953 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
ZNF544-215ENST00000599953 GOLGA6L3A6NEY3 463 aa13.34□□□□□ -0.27
ZNF544-215ENST00000599953 RABEP1Q15276 862 aa13.34□□□□□ -0.27
ZNF544-215ENST00000599953 EYA1Q99502 592 aa13.33□□□□□ -0.28
ZNF544-215ENST00000599953 MEIS3Q99687 375 aa13.33□□□□□ -0.28
ZNF544-215ENST00000599953 PIK3C2AO00443 1686 aa13.32□□□□□ -0.28
ZNF544-215ENST00000599953 NLRP6P59044 892 aa13.32□□□□□ -0.28
ZNF544-215ENST00000599953 RAB3GAP1Q15042 981 aa13.32□□□□□ -0.28
ZNF544-215ENST00000599953 ISY1Q9ULR0 285 aaKnown RBP13.32□□□□□ -0.28
ZNF544-215ENST00000599953 XRN1Q8IZH2 1706 aaKnown RBP13.32□□□□□ -0.28
ZNF544-215ENST00000599953 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
ZNF544-215ENST00000599953 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
ZNF544-215ENST00000599953 FOXO3O43524 673 aa13.31□□□□□ -0.28
ZNF544-215ENST00000599953 SKOR2Q2VWA4 1001 aaPredicted RBP13.31□□□□□ -0.28
ZNF544-215ENST00000599953 BABAM1Q9NWV8 329 aa13.31□□□□□ -0.28
ZNF544-215ENST00000599953 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
ZNF544-215ENST00000599953 CEP170BQ9Y4F5 1589 aaPredicted RBP13.31□□□□□ -0.28
ZNF544-215ENST00000599953 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
ZNF544-215ENST00000599953 REC8O95072 547 aa13.3□□□□□ -0.28
ZNF544-215ENST00000599953 GNAI2P04899 355 aa13.3□□□□□ -0.28
ZNF544-215ENST00000599953 SLC4A10Q6U841 1118 aa13.3□□□□□ -0.28
ZNF544-215ENST00000599953 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
ZNF544-215ENST00000599953 LRRC37A3O60309 1634 aa13.3□□□□□ -0.28
ZNF544-215ENST00000599953 FSD2A1L4K1 749 aa13.3□□□□□ -0.28
ZNF544-215ENST00000599953 C16orf71Q8IYS4 520 aaPredicted RBP13.3□□□□□ -0.28
ZNF544-215ENST00000599953 FAM43AQ8N2R8 423 aa13.3□□□□□ -0.28
ZNF544-215ENST00000599953 USP54Q70EL1 1684 aa13.3□□□□□ -0.28
ZNF544-215ENST00000599953 RGPD8O14715 1765 aaPredicted RBP13.3□□□□□ -0.28
ZNF544-215ENST00000599953 GNAI3P08754 354 aa13.29□□□□□ -0.28
ZNF544-215ENST00000599953 SDSP20132 328 aa13.29□□□□□ -0.28
ZNF544-215ENST00000599953 GOLGA6L22H0YM25 854 aa13.29□□□□□ -0.28
ZNF544-215ENST00000599953 HOXC9P31274 260 aa13.29□□□□□ -0.28
ZNF544-215ENST00000599953 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
ZNF544-215ENST00000599953 OSBPL3Q9H4L5 887 aa13.29□□□□□ -0.28
ZNF544-215ENST00000599953 MAP3K5Q99683 1374 aa13.28□□□□□ -0.28
ZNF544-215ENST00000599953 GZF1Q9H116 711 aaPredicted RBP13.28□□□□□ -0.28
ZNF544-215ENST00000599953 APBB1O00213 710 aa13.28□□□□□ -0.28
ZNF544-215ENST00000599953 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
ZNF544-215ENST00000599953 FLIIQ13045 1269 aa13.28□□□□□ -0.28
ZNF544-215ENST00000599953 G2E3Q7L622 706 aa13.28□□□□□ -0.28
ZNF544-215ENST00000599953 F6X3S4 739 aa13.27□□□□□ -0.28
ZNF544-215ENST00000599953 SMARCA5O60264 1052 aaPredicted RBP13.27□□□□□ -0.28
ZNF544-215ENST00000599953 ST18O60284 1047 aa13.27□□□□□ -0.28
ZNF544-215ENST00000599953 MRE11P49959 708 aa13.27□□□□□ -0.28
ZNF544-215ENST00000599953 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.28
ZNF544-215ENST00000599953 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.28
ZNF544-215ENST00000599953 FAM208AQ9UK61 1670 aaKnown RBP13.27□□□□□ -0.29
ZNF544-215ENST00000599953 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
ZNF544-215ENST00000599953 OTUD7AQ8TE49 926 aaPredicted RBP13.27□□□□□ -0.29
ZNF544-215ENST00000599953 CACNA1FO60840 1977 aa13.26□□□□□ -0.29
ZNF544-215ENST00000599953 ERC2O15083 957 aa13.26□□□□□ -0.29
ZNF544-215ENST00000599953 TAF7Q15545 349 aaPredicted RBP13.26□□□□□ -0.29
ZNF544-215ENST00000599953 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
ZNF544-215ENST00000599953 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms