RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 ESPNB1AK53 854 aa15.13■□□□□ 0.01
USHBP1-207ENST00000597928 ABCA6Q8N139 1617 aa15.12■□□□□ 0.01
USHBP1-207ENST00000597928 FBXW7Q969H0 707 aa15.12■□□□□ 0.01
USHBP1-207ENST00000597928 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
USHBP1-207ENST00000597928 IL16Q14005 1332 aa15.12■□□□□ 0.01
USHBP1-207ENST00000597928 FIBPO43427 364 aa15.12■□□□□ 0.01
USHBP1-207ENST00000597928 MYL6BP14649 208 aa15.12■□□□□ 0.01
USHBP1-207ENST00000597928 FLIIQ13045 1269 aa15.12■□□□□ 0.01
USHBP1-207ENST00000597928 POGZQ7Z3K3 1410 aa15.12■□□□□ 0.01
USHBP1-207ENST00000597928 TCEANC2Q96MN5 208 aa15.11■□□□□ 0.01
USHBP1-207ENST00000597928 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
USHBP1-207ENST00000597928 KDM4AO75164 1064 aa15.11■□□□□ 0.01
USHBP1-207ENST00000597928 ZC3H6P61129 1189 aaKnown RBP15.11■□□□□ 0.01
USHBP1-207ENST00000597928 TAF7Q15545 349 aaPredicted RBP15.11■□□□□ 0.01
USHBP1-207ENST00000597928 R3HCC1Q9Y3T6 440 aaKnown RBP15.11■□□□□ 0.01
USHBP1-207ENST00000597928 METP08581 1390 aa15.11■□□□□ 0.01
USHBP1-207ENST00000597928 FAM13BQ9NYF5 915 aa15.11■□□□□ 0.01
USHBP1-207ENST00000597928 MSH6P52701 1360 aa15.11■□□□□ 0.01
USHBP1-207ENST00000597928 PNMA6EA0A0J9YXQ4 647 aa15.1■□□□□ 0.01
USHBP1-207ENST00000597928 CCDC30Q5VVM6 783 aa15.1■□□□□ 0.01
USHBP1-207ENST00000597928 LRRC59Q96AG4 307 aaKnown RBP15.1■□□□□ 0.01
USHBP1-207ENST00000597928 EYA1Q99502 592 aa15.1■□□□□ 0.01
USHBP1-207ENST00000597928 DIAPH3Q9NSV4 1193 aa15.1■□□□□ 0.01
USHBP1-207ENST00000597928 SKOR2Q2VWA4 1001 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-207ENST00000597928 RPAP2Q8IXW5 612 aaPredicted RBP15.1■□□□□ 0.01
USHBP1-207ENST00000597928 MAP3K19Q56UN5 1328 aa15.1■□□□□ 0.01
USHBP1-207ENST00000597928 STK3Q13188 491 aa15.1■□□□□ 0.01
USHBP1-207ENST00000597928 ANKRD44Q8N8A2 993 aa15.1■□□□□ 0.01
USHBP1-207ENST00000597928 RIMS2Q9UQ26 1411 aa15.09■□□□□ 0.01
USHBP1-207ENST00000597928 NUCB2P80303 420 aa15.09■□□□□ 0.01
USHBP1-207ENST00000597928 MAP3K4Q9Y6R4 1608 aa15.09■□□□□ 0.01
USHBP1-207ENST00000597928 MX1P20591 662 aa15.09■□□□□ 0.01
USHBP1-207ENST00000597928 FERMT3Q86UX7 667 aa15.09■□□□□ 0.01
USHBP1-207ENST00000597928 DCTPP1Q9H773 170 aa15.09■□□□□ 0.01
USHBP1-207ENST00000597928 SPHKAPQ2M3C7 1700 aa15.09■□□□□ 0.01
USHBP1-207ENST00000597928 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
USHBP1-207ENST00000597928 HSP90AA2PQ14568 343 aaPredicted RBP15.08■□□□□ 0.01
USHBP1-207ENST00000597928 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
USHBP1-207ENST00000597928 PDE1AP54750 535 aa15.08■□□□□ 0
USHBP1-207ENST00000597928 SBNO2Q9Y2G9 1366 aa15.08■□□□□ 0
USHBP1-207ENST00000597928 ZNF530Q6P9A1 599 aaPredicted RBP15.08■□□□□ 0
USHBP1-207ENST00000597928 IFIT2P09913 472 aaKnown RBP15.07■□□□□ 0
USHBP1-207ENST00000597928 LTKP29376 864 aa15.07■□□□□ 0
USHBP1-207ENST00000597928 PRR36Q9H6K5 1346 aa15.07■□□□□ 0
USHBP1-207ENST00000597928 GNAT3A8MTJ3 354 aa15.07■□□□□ 0
USHBP1-207ENST00000597928 PA2G4Q9UQ80 394 aaKnown RBP15.07■□□□□ 0
USHBP1-207ENST00000597928 PI4KAP2A4QPH2 592 aa15.06■□□□□ 0
USHBP1-207ENST00000597928 C1orf141Q5JVX7 400 aa15.06■□□□□ 0
USHBP1-207ENST00000597928 PI4KAP1Q8N8J0 262 aa15.06■□□□□ 0
USHBP1-207ENST00000597928 USP26Q9BXU7 913 aa15.06■□□□□ 0
USHBP1-207ENST00000597928 NLRP2Q9NX02 1062 aa15.06■□□□□ 0
USHBP1-207ENST00000597928 GNAI3P08754 354 aa15.06■□□□□ 0
USHBP1-207ENST00000597928 RBM25P49756 843 aaKnown RBP15.06■□□□□ 0
USHBP1-207ENST00000597928 PPP1R42Q7Z4L9 355 aa15.06■□□□□ 0
USHBP1-207ENST00000597928 CEBPZQ03701 1054 aaKnown RBP15.06■□□□□ 0
USHBP1-207ENST00000597928 CCDC8Q9H0W5 538 aaPredicted RBP15.06■□□□□ 0
USHBP1-207ENST00000597928 CCT4P50991 539 aaKnown RBP15.05■□□□□ 0
USHBP1-207ENST00000597928 RAB3GAP1Q15042 981 aa15.05■□□□□ 0
USHBP1-207ENST00000597928 HSP90B1P14625 803 aaKnown RBP15.05■□□□□ -0
USHBP1-207ENST00000597928 DRC7Q8IY82 874 aa15.05■□□□□ -0
USHBP1-207ENST00000597928 CCDC85AQ96PX6 553 aaPredicted RBP15.05■□□□□ -0
USHBP1-207ENST00000597928 SRCIN1Q9C0H9 1055 aa15.05■□□□□ -0
USHBP1-207ENST00000597928 PALD1Q9ULE6 856 aa15.05■□□□□ -0
USHBP1-207ENST00000597928 RNF17Q9BXT8 1623 aaKnown RBP15.05■□□□□ -0
USHBP1-207ENST00000597928 KIF1BO60333 1816 aa15.05■□□□□ -0
USHBP1-207ENST00000597928 KCNQ3O43525 872 aa15.05■□□□□ -0
USHBP1-207ENST00000597928 TMX3Q96JJ7 454 aa15.05■□□□□ -0
USHBP1-207ENST00000597928 ZNF830Q96NB3 372 aaPredicted RBP15.05■□□□□ -0
USHBP1-207ENST00000597928 MYOM2P54296 1465 aa15.04■□□□□ -0
USHBP1-207ENST00000597928 PRIM1P49642 420 aaKnown RBP15.04■□□□□ -0
USHBP1-207ENST00000597928 ARHGAP45Q92619 1136 aa15.04■□□□□ -0
USHBP1-207ENST00000597928 LGR6Q9HBX8 967 aa15.04■□□□□ -0
USHBP1-207ENST00000597928 UNC5CLQ8IV45 518 aa15.04■□□□□ -0
USHBP1-207ENST00000597928 CHPF2Q9P2E5 772 aa15.04■□□□□ -0
USHBP1-207ENST00000597928 EFCAB6Q5THR3 1501 aa15.04■□□□□ -0
USHBP1-207ENST00000597928 CEP152O94986 1710 aa15.04■□□□□ -0
USHBP1-207ENST00000597928 TET3O43151 1660 aa15.03■□□□□ -0
USHBP1-207ENST00000597928 SLC39A6Q13433 755 aa15.03■□□□□ -0
USHBP1-207ENST00000597928 SMC3Q9UQE7 1217 aa15.03■□□□□ -0
USHBP1-207ENST00000597928 BTBD11A6QL63 1104 aa15.03■□□□□ -0
USHBP1-207ENST00000597928 RIC3Q7Z5B4 369 aa15.03■□□□□ -0
USHBP1-207ENST00000597928 TULP4Q9NRJ4 1543 aa15.02■□□□□ -0
USHBP1-207ENST00000597928 CHL1O00533 1208 aa15.02■□□□□ -0
USHBP1-207ENST00000597928 CCDC83Q8IWF9 413 aa15.02■□□□□ -0
USHBP1-207ENST00000597928 NDUFB9Q9Y6M9 179 aa15.02■□□□□ -0
USHBP1-207ENST00000597928 SPC24Q8NBT2 197 aa15.02□□□□□ -0.01
USHBP1-207ENST00000597928 KLHDC4Q8TBB5 520 aa15.02□□□□□ -0.01
USHBP1-207ENST00000597928 BOLA2Q9H3K6 86 aa15.02□□□□□ -0.01
USHBP1-207ENST00000597928 CWF19L2Q2TBE0 894 aaKnown RBP15.01□□□□□ -0.01
USHBP1-207ENST00000597928 ZSCAN23Q3MJ62 389 aa15.01□□□□□ -0.01
USHBP1-207ENST00000597928 DNAJC2Q99543 621 aaKnown RBP15.01□□□□□ -0.01
USHBP1-207ENST00000597928 CASTP20810 708 aaKnown RBP15.01□□□□□ -0.01
USHBP1-207ENST00000597928 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
USHBP1-207ENST00000597928 NECAB1Q8N987 351 aa15.01□□□□□ -0.01
USHBP1-207ENST00000597928 KIF2CQ99661 725 aa15.01□□□□□ -0.01
USHBP1-207ENST00000597928 GLIPR1L2Q4G1C9 344 aa15.01□□□□□ -0.01
USHBP1-207ENST00000597928 AACSQ86V21 672 aa15.01□□□□□ -0.01
USHBP1-207ENST00000597928 SNX21Q969T3 373 aa15.01□□□□□ -0.01
USHBP1-207ENST00000597928 JAKMIP1Q96N16 626 aaKnown RBP15.01□□□□□ -0.01
USHBP1-207ENST00000597928 NEUROD6Q96NK8 337 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms