RNA–Protein interactions for RNA: ENST00000597353.5

SNRPA-203, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-203ENST00000597353 DDX54Q8TDD1 881 aaKnown RBP29.5■■■□□ 2.31
SNRPA-203ENST00000597353 NPC1L1Q9UHC9 1359 aa29.5■■■□□ 2.31
SNRPA-203ENST00000597353 RREB1Q92766 1687 aa29.5■■■□□ 2.31
SNRPA-203ENST00000597353 RAPGEF4Q8WZA2 1011 aa29.49■■■□□ 2.31
SNRPA-203ENST00000597353 ACSBG1Q96GR2 724 aa29.49■■■□□ 2.31
SNRPA-203ENST00000597353 NHSQ6T4R5 1651 aa29.49■■■□□ 2.31
SNRPA-203ENST00000597353 PLSCR1O15162 318 aa29.47■■■□□ 2.31
SNRPA-203ENST00000597353 TATP17735 454 aaPredicted RBP29.46■■■□□ 2.31
SNRPA-203ENST00000597353 CC2D1BQ5T0F9 858 aaKnown RBP29.46■■■□□ 2.31
SNRPA-203ENST00000597353 PROM2Q8N271 834 aa29.45■■■□□ 2.31
SNRPA-203ENST00000597353 RGPD3A6NKT7 1758 aaPredicted RBP29.44■■■□□ 2.3
SNRPA-203ENST00000597353 RGPD4Q7Z3J3 1758 aa29.44■■■□□ 2.3
SNRPA-203ENST00000597353 IGSF1Q8N6C5 1336 aa29.44■■■□□ 2.3
SNRPA-203ENST00000597353 NUP188Q5SRE5 1749 aa29.43■■■□□ 2.3
SNRPA-203ENST00000597353 PSDA5PKW4 1024 aaPredicted RBP29.41■■■□□ 2.3
SNRPA-203ENST00000597353 CYP27B1O15528 508 aa29.4■■■□□ 2.3
SNRPA-203ENST00000597353 PKD1L3Q7Z443 1732 aa29.4■■■□□ 2.3
SNRPA-203ENST00000597353 MTHFSP49914 203 aa29.38■■■□□ 2.29
SNRPA-203ENST00000597353 R3HDM1Q15032 1099 aaKnown RBP29.38■■■□□ 2.29
SNRPA-203ENST00000597353 PCDH11XQ9BZA7 1347 aa29.38■■■□□ 2.29
SNRPA-203ENST00000597353 PCDH11YQ9BZA8 1340 aa29.38■■■□□ 2.29
SNRPA-203ENST00000597353 IL13P35225 146 aa29.37■■■□□ 2.29
SNRPA-203ENST00000597353 DOT1LQ8TEK3 1739 aa29.35■■■□□ 2.29
SNRPA-203ENST00000597353 PRIM1P49642 420 aaKnown RBP29.35■■■□□ 2.29
SNRPA-203ENST00000597353 ANO8Q9HCE9 1232 aaPredicted RBP29.35■■■□□ 2.29
SNRPA-203ENST00000597353 BTAF1O14981 1849 aa29.35■■■□□ 2.29
SNRPA-203ENST00000597353 TXNRD1Q16881 649 aa29.34■■■□□ 2.29
SNRPA-203ENST00000597353 AEBP1Q8IUX7 1158 aa29.34■■■□□ 2.29
SNRPA-203ENST00000597353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.33■■■□□ 2.29
SNRPA-203ENST00000597353 PLEKHG2Q9H7P9 1386 aa29.32■■■□□ 2.28
SNRPA-203ENST00000597353 CNGB1Q14028 1251 aaPredicted RBP29.32■■■□□ 2.28
SNRPA-203ENST00000597353 COL3A1P02461 1466 aaPredicted RBP29.3■■■□□ 2.28
SNRPA-203ENST00000597353 KDRP35968 1356 aa29.3■■■□□ 2.28
SNRPA-203ENST00000597353 NKX1-1Q15270 411 aaPredicted RBP29.3■■■□□ 2.28
SNRPA-203ENST00000597353 SPG7Q9UQ90 795 aa29.29■■■□□ 2.28
SNRPA-203ENST00000597353 TOGARAM1Q9Y4F4 1720 aa29.28■■■□□ 2.28
SNRPA-203ENST00000597353 SYTL4Q96C24 671 aaPredicted RBP29.28■■■□□ 2.28
SNRPA-203ENST00000597353 PHKG2P15735 406 aa29.26■■■□□ 2.27
SNRPA-203ENST00000597353 NBPF14Q5TI25 921 aa29.26■■■□□ 2.27
SNRPA-203ENST00000597353 LRRC4BQ9NT99 713 aa29.26■■■□□ 2.27
SNRPA-203ENST00000597353 SULT6B1Q6IMI4 303 aa29.25■■■□□ 2.27
SNRPA-203ENST00000597353 PAPPAQ13219 1627 aa29.24■■■□□ 2.27
SNRPA-203ENST00000597353 KAT6BQ8WYB5 2073 aa29.21■■■□□ 2.27
SNRPA-203ENST00000597353 IFNL2Q8IZJ0 200 aa29.21■■■□□ 2.27
SNRPA-203ENST00000597353 DIAPH1O60610 1272 aaKnown RBP29.2■■■□□ 2.26
SNRPA-203ENST00000597353 PPP2R1AP30153 589 aa29.18■■■□□ 2.26
SNRPA-203ENST00000597353 LRP5O75197 1615 aa29.18■■■□□ 2.26
SNRPA-203ENST00000597353 KCNQ4P56696 695 aa29.17■■■□□ 2.26
SNRPA-203ENST00000597353 PLEKHO1Q53GL0 409 aaPredicted RBP29.17■■■□□ 2.26
SNRPA-203ENST00000597353 MPRIPQ6WCQ1 1025 aa29.17■■■□□ 2.26
SNRPA-203ENST00000597353 PIGBQ92521 554 aa29.17■■■□□ 2.26
SNRPA-203ENST00000597353 PDGFDQ9GZP0 370 aaPredicted RBP29.17■■■□□ 2.26
SNRPA-203ENST00000597353 HMOX1P09601 288 aa29.16■■■□□ 2.26
SNRPA-203ENST00000597353 SLC15A2Q16348 729 aa29.16■■■□□ 2.26
SNRPA-203ENST00000597353 ZNF827Q17R98 1081 aa29.16■■■□□ 2.26
SNRPA-203ENST00000597353 AMOTQ4VCS5 1084 aa29.16■■■□□ 2.26
SNRPA-203ENST00000597353 SLC27A3Q5K4L6 730 aa29.16■■■□□ 2.26
SNRPA-203ENST00000597353 LY75O60449 1722 aa29.16■■■□□ 2.26
SNRPA-203ENST00000597353 KDM6AO15550 1401 aaPredicted RBP29.15■■■□□ 2.26
SNRPA-203ENST00000597353 ZNF530Q6P9A1 599 aaPredicted RBP29.15■■■□□ 2.26
SNRPA-203ENST00000597353 STK32BQ9NY57 414 aa29.13■■■□□ 2.25
SNRPA-203ENST00000597353 CASZ1Q86V15 1759 aa29.13■■■□□ 2.25
SNRPA-203ENST00000597353 AKT1S1Q96B36 256 aa29.12■■■□□ 2.25
SNRPA-203ENST00000597353 ITGB4P16144 1822 aa29.12■■■□□ 2.25
SNRPA-203ENST00000597353 PALLDQ8WX93 1383 aa29.12■■■□□ 2.25
SNRPA-203ENST00000597353 ZEB1P37275 1124 aaPredicted RBP29.09■■■□□ 2.25
SNRPA-203ENST00000597353 DDX10Q13206 875 aaKnown RBP29.09■■■□□ 2.25
SNRPA-203ENST00000597353 DCAF5Q96JK2 942 aa29.09■■■□□ 2.25
SNRPA-203ENST00000597353 CCNL1Q9UK58 526 aaPredicted RBP29.09■■■□□ 2.25
SNRPA-203ENST00000597353 HSP90AB1P08238 724 aaKnown RBP29.07■■■□□ 2.24
SNRPA-203ENST00000597353 TMOD3Q9NYL9 352 aa29.07■■■□□ 2.24
SNRPA-203ENST00000597353 ERVV-2B6SEH9 535 aa29.06■■■□□ 2.24
SNRPA-203ENST00000597353 U2SURPO15042 1029 aaKnown RBP29.06■■■□□ 2.24
SNRPA-203ENST00000597353 ASAP1Q9ULH1 1129 aa29.06■■■□□ 2.24
SNRPA-203ENST00000597353 MTHFSDQ2M296 383 aaKnown RBP29.04■■■□□ 2.24
SNRPA-203ENST00000597353 C1orf141Q5JVX7 400 aa29.04■■■□□ 2.24
SNRPA-203ENST00000597353 SMARCC1Q92922 1105 aaPredicted RBP29.04■■■□□ 2.24
SNRPA-203ENST00000597353 CFAP53Q96M91 514 aa29.04■■■□□ 2.24
SNRPA-203ENST00000597353 ATG3Q9NT62 314 aa29.04■■■□□ 2.24
SNRPA-203ENST00000597353 AKAP4Q5JQC9 854 aa29.02■■■□□ 2.24
SNRPA-203ENST00000597353 RSPH6AQ9H0K4 717 aa29.01■■■□□ 2.23
SNRPA-203ENST00000597353 PNPLA7Q6ZV29 1317 aa28.99■■■□□ 2.23
SNRPA-203ENST00000597353 ZBTB7AO95365 584 aa28.99■■■□□ 2.23
SNRPA-203ENST00000597353 LOC102724428A0A0B4J2F2 783 aa28.98■■■□□ 2.23
SNRPA-203ENST00000597353 SIK1P57059 783 aa28.98■■■□□ 2.23
SNRPA-203ENST00000597353 LGR6Q9HBX8 967 aa28.98■■■□□ 2.23
SNRPA-203ENST00000597353 SPON1Q9HCB6 807 aa28.98■■■□□ 2.23
SNRPA-203ENST00000597353 CABP4P57796 275 aa28.97■■■□□ 2.23
SNRPA-203ENST00000597353 SLC4A9Q96Q91 983 aa28.97■■■□□ 2.23
SNRPA-203ENST00000597353 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
SNRPA-203ENST00000597353 PTGER2P43116 358 aa28.96■■■□□ 2.23
SNRPA-203ENST00000597353 TUBGCP6Q96RT7 1819 aa28.96■■■□□ 2.23
SNRPA-203ENST00000597353 MRC1P22897 1456 aa28.96■■■□□ 2.23
SNRPA-203ENST00000597353 C5P01031 1676 aa28.96■■■□□ 2.23
SNRPA-203ENST00000597353 QSER1Q2KHR3 1735 aa28.95■■■□□ 2.23
SNRPA-203ENST00000597353 ITPK1Q13572 414 aa28.95■■■□□ 2.22
SNRPA-203ENST00000597353 NFATC2IPQ8NCF5 419 aa28.95■■■□□ 2.22
SNRPA-203ENST00000597353 PHACTR3Q96KR7 559 aa28.95■■■□□ 2.22
SNRPA-203ENST00000597353 RNMTO43148 476 aaKnown RBP28.94■■■□□ 2.22
SNRPA-203ENST00000597353 PRKAR2BP31323 418 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms