RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 ADCY9O60503 1353 aa12.15□□□□□ -0.46
FARP1-217ENST00000596467 SLC27A3Q5K4L6 730 aa12.14□□□□□ -0.47
FARP1-217ENST00000596467 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
FARP1-217ENST00000596467 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
FARP1-217ENST00000596467 NFAT5O94916 1531 aa12.14□□□□□ -0.47
FARP1-217ENST00000596467 PCNTO95613 3336 aa12.14□□□□□ -0.47
FARP1-217ENST00000596467 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
FARP1-217ENST00000596467 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
FARP1-217ENST00000596467 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
FARP1-217ENST00000596467 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
FARP1-217ENST00000596467 SRPK2P78362 688 aaKnown RBP12.12□□□□□ -0.47
FARP1-217ENST00000596467 ACSBG1Q96GR2 724 aa12.12□□□□□ -0.47
FARP1-217ENST00000596467 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
FARP1-217ENST00000596467 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
FARP1-217ENST00000596467 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
FARP1-217ENST00000596467 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
FARP1-217ENST00000596467 MON2Q7Z3U7 1717 aa12.09□□□□□ -0.47
FARP1-217ENST00000596467 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
FARP1-217ENST00000596467 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
FARP1-217ENST00000596467 CABP1Q9NZU7 370 aa12.09□□□□□ -0.47
FARP1-217ENST00000596467 WDR90Q96KV7 1748 aa12.08□□□□□ -0.47
FARP1-217ENST00000596467 IL2RBP14784 551 aa12.08□□□□□ -0.48
FARP1-217ENST00000596467 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
FARP1-217ENST00000596467 TFCP2L1Q9NZI6 479 aa12.08□□□□□ -0.48
FARP1-217ENST00000596467 ERBB3P21860 1342 aa12.08□□□□□ -0.48
FARP1-217ENST00000596467 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.48
FARP1-217ENST00000596467 C5P01031 1676 aa12.07□□□□□ -0.48
FARP1-217ENST00000596467 APLP1P51693 650 aa12.07□□□□□ -0.48
FARP1-217ENST00000596467 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
FARP1-217ENST00000596467 TTC21BQ7Z4L5 1316 aa12.07□□□□□ -0.48
FARP1-217ENST00000596467 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
FARP1-217ENST00000596467 DNAJC5GQ8N7S2 189 aa12.06□□□□□ -0.48
FARP1-217ENST00000596467 CICQ96RK0 1608 aaPredicted RBP12.05□□□□□ -0.48
FARP1-217ENST00000596467 KIF3CO14782 793 aa12.05□□□□□ -0.48
FARP1-217ENST00000596467 REM2Q8IYK8 340 aaPredicted RBP12.05□□□□□ -0.48
FARP1-217ENST00000596467 NLRP2Q9NX02 1062 aa12.03□□□□□ -0.48
FARP1-217ENST00000596467 UBR3Q6ZT12 1888 aa12.03□□□□□ -0.48
FARP1-217ENST00000596467 ANKRD36BQ8N2N9 1353 aa12.03□□□□□ -0.48
FARP1-217ENST00000596467 RAB3GAP2Q9H2M9 1393 aa12.03□□□□□ -0.48
FARP1-217ENST00000596467 KIF13BQ9NQT8 1826 aa12.02□□□□□ -0.48
FARP1-217ENST00000596467 HMGB2P26583 209 aaKnown RBP12.02□□□□□ -0.49
FARP1-217ENST00000596467 NBPF1Q3BBV0 1214 aa12.02□□□□□ -0.49
FARP1-217ENST00000596467 COL23A1Q86Y22 540 aaPredicted RBP12.02□□□□□ -0.49
FARP1-217ENST00000596467 ZNF526Q8TF50 670 aaPredicted RBP12.02□□□□□ -0.49
FARP1-217ENST00000596467 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
FARP1-217ENST00000596467 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
FARP1-217ENST00000596467 SOX12O15370 315 aa12.01□□□□□ -0.49
FARP1-217ENST00000596467 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
FARP1-217ENST00000596467 NSD2O96028 1365 aa12.01□□□□□ -0.49
FARP1-217ENST00000596467 TOMM70O94826 608 aa12□□□□□ -0.49
FARP1-217ENST00000596467 KCNQ4P56696 695 aa11.99□□□□□ -0.49
FARP1-217ENST00000596467 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
FARP1-217ENST00000596467 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
FARP1-217ENST00000596467 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
FARP1-217ENST00000596467 TOGARAM1Q9Y4F4 1720 aa11.99□□□□□ -0.49
FARP1-217ENST00000596467 BRCA1P38398 1863 aaKnown RBP11.99□□□□□ -0.49
FARP1-217ENST00000596467 ITGB4P16144 1822 aa11.98□□□□□ -0.49
FARP1-217ENST00000596467 KTN1Q86UP2 1357 aaKnown RBP11.98□□□□□ -0.49
FARP1-217ENST00000596467 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
FARP1-217ENST00000596467 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
FARP1-217ENST00000596467 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
FARP1-217ENST00000596467 SPDYE2Q495Y8 402 aa11.98□□□□□ -0.49
FARP1-217ENST00000596467 JMYQ8N9B5 988 aa11.98□□□□□ -0.49
FARP1-217ENST00000596467 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
FARP1-217ENST00000596467 C4BP0C0L5 1744 aa11.97□□□□□ -0.49
FARP1-217ENST00000596467 KIAA1551Q9HCM1 1747 aa11.97□□□□□ -0.49
FARP1-217ENST00000596467 PRELPP51888 382 aa11.97□□□□□ -0.49
FARP1-217ENST00000596467 COL13A1Q5TAT6 717 aaPredicted RBP11.97□□□□□ -0.49
FARP1-217ENST00000596467 DDX54Q8TDD1 881 aaKnown RBP11.97□□□□□ -0.49
FARP1-217ENST00000596467 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
FARP1-217ENST00000596467 USP47Q96K76 1375 aa11.96□□□□□ -0.49
FARP1-217ENST00000596467 IGSF1Q8N6C5 1336 aa11.96□□□□□ -0.49
FARP1-217ENST00000596467 MSL1Q68DK7 614 aa11.96□□□□□ -0.49
FARP1-217ENST00000596467 SYTL4Q96C24 671 aaPredicted RBP11.96□□□□□ -0.49
FARP1-217ENST00000596467 N4BP2Q86UW6 1770 aaPredicted RBP11.96□□□□□ -0.49
FARP1-217ENST00000596467 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
FARP1-217ENST00000596467 KLRG1Q96E93 195 aa11.95□□□□□ -0.5
FARP1-217ENST00000596467 PKD1L3Q7Z443 1732 aa11.94□□□□□ -0.5
FARP1-217ENST00000596467 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
FARP1-217ENST00000596467 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
FARP1-217ENST00000596467 SBF1O95248 1867 aa11.93□□□□□ -0.5
FARP1-217ENST00000596467 TNS4Q8IZW8 715 aa11.93□□□□□ -0.5
FARP1-217ENST00000596467 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
FARP1-217ENST00000596467 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
FARP1-217ENST00000596467 NSD3Q9BZ95 1437 aa11.93□□□□□ -0.5
FARP1-217ENST00000596467 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
FARP1-217ENST00000596467 CD163L1Q9NR16 1453 aa11.92□□□□□ -0.5
FARP1-217ENST00000596467 ZCRB1Q8TBF4 217 aaKnown RBP11.92□□□□□ -0.5
FARP1-217ENST00000596467 IP6K1Q92551 441 aa11.92□□□□□ -0.5
FARP1-217ENST00000596467 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
FARP1-217ENST00000596467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.91□□□□□ -0.53e-6■□□□□ 9.4
FARP1-217ENST00000596467 CGNL1Q0VF96 1302 aa11.9□□□□□ -0.5
FARP1-217ENST00000596467 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
FARP1-217ENST00000596467 FSTL1Q12841 308 aa11.9□□□□□ -0.5
FARP1-217ENST00000596467 EDC4Q6P2E9 1401 aaKnown RBP11.9□□□□□ -0.5
FARP1-217ENST00000596467 MEGF6O75095 1541 aa11.9□□□□□ -0.5
FARP1-217ENST00000596467 C10orf71Q711Q0 1435 aa11.89□□□□□ -0.51
FARP1-217ENST00000596467 NME9Q86XW9 330 aa11.89□□□□□ -0.51
FARP1-217ENST00000596467 MIER1Q8N108 512 aa11.89□□□□□ -0.51
FARP1-217ENST00000596467 NMRK2Q9NPI5 230 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms