RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 TRIM37O94972 964 aa18.65■□□□□ 0.58
SHKBP1-207ENST00000595631 IL13P35225 146 aa18.65■□□□□ 0.58
SHKBP1-207ENST00000595631 TOGARAM1Q9Y4F4 1720 aa18.64■□□□□ 0.57
SHKBP1-207ENST00000595631 TATP17735 454 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-207ENST00000595631 AEBP1Q8IUX7 1158 aa18.64■□□□□ 0.57
SHKBP1-207ENST00000595631 DDX54Q8TDD1 881 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-207ENST00000595631 BTAF1O14981 1849 aa18.63■□□□□ 0.57
SHKBP1-207ENST00000595631 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-207ENST00000595631 PTF1AQ7RTS3 328 aa18.63■□□□□ 0.57
SHKBP1-207ENST00000595631 DEFB132Q7Z7B7 95 aa18.63■□□□□ 0.57
SHKBP1-207ENST00000595631 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-207ENST00000595631 ITGB4P16144 1822 aa18.62■□□□□ 0.57
SHKBP1-207ENST00000595631 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-207ENST00000595631 CCDC125Q86Z20 511 aa18.61■□□□□ 0.57
SHKBP1-207ENST00000595631 BCL9O00512 1426 aa18.6■□□□□ 0.57
SHKBP1-207ENST00000595631 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-207ENST00000595631 ACSBG1Q96GR2 724 aa18.6■□□□□ 0.57
SHKBP1-207ENST00000595631 SULT6B1Q6IMI4 303 aa18.59■□□□□ 0.57
SHKBP1-207ENST00000595631 RREB1Q92766 1687 aa18.59■□□□□ 0.57
SHKBP1-207ENST00000595631 KDRP35968 1356 aa18.58■□□□□ 0.57
SHKBP1-207ENST00000595631 KCNQ2O43526 872 aa18.58■□□□□ 0.56
SHKBP1-207ENST00000595631 HMOX1P09601 288 aa18.58■□□□□ 0.56
SHKBP1-207ENST00000595631 RGPD3A6NKT7 1758 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-207ENST00000595631 RGPD4Q7Z3J3 1758 aa18.58■□□□□ 0.56
SHKBP1-207ENST00000595631 CYP27B1O15528 508 aa18.57■□□□□ 0.56
SHKBP1-207ENST00000595631 EN1Q05925 392 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-207ENST00000595631 NUP188Q5SRE5 1749 aa18.57■□□□□ 0.56
SHKBP1-207ENST00000595631 PCDH11XQ9BZA7 1347 aa18.56■□□□□ 0.56
SHKBP1-207ENST00000595631 PCDH11YQ9BZA8 1340 aa18.56■□□□□ 0.56
SHKBP1-207ENST00000595631 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-207ENST00000595631 APBA3O96018 575 aa18.56■□□□□ 0.56
SHKBP1-207ENST00000595631 CFAP53Q96M91 514 aa18.56■□□□□ 0.56
SHKBP1-207ENST00000595631 BAG6P46379 1132 aa18.55■□□□□ 0.56
SHKBP1-207ENST00000595631 RALBP1Q15311 655 aa18.54■□□□□ 0.56
SHKBP1-207ENST00000595631 BCL11BQ9C0K0 894 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-207ENST00000595631 SPG7Q9UQ90 795 aa18.54■□□□□ 0.56
SHKBP1-207ENST00000595631 SCN11AQ9UI33 1791 aa18.53■□□□□ 0.56
SHKBP1-207ENST00000595631 EZH2Q15910 746 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-207ENST00000595631 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-207ENST00000595631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.55
SHKBP1-207ENST00000595631 LY75O60449 1722 aa18.51■□□□□ 0.55
SHKBP1-207ENST00000595631 MYBBP1AQ9BQG0 1328 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-207ENST00000595631 PHKG2P15735 406 aa18.5■□□□□ 0.55
SHKBP1-207ENST00000595631 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-207ENST00000595631 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-207ENST00000595631 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-207ENST00000595631 CAMKK2Q96RR4 588 aa18.5■□□□□ 0.55
SHKBP1-207ENST00000595631 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
SHKBP1-207ENST00000595631 ZNF530Q6P9A1 599 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-207ENST00000595631 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
SHKBP1-207ENST00000595631 DLG5Q8TDM6 1919 aa18.48■□□□□ 0.55
SHKBP1-207ENST00000595631 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-207ENST00000595631 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHKBP1-207ENST00000595631 NKX1-1Q15270 411 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-207ENST00000595631 AMOTQ4VCS5 1084 aa18.47■□□□□ 0.55
SHKBP1-207ENST00000595631 NUDCQ9Y266 331 aa18.47■□□□□ 0.55
SHKBP1-207ENST00000595631 KDM6AO15550 1401 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-207ENST00000595631 RSPH6AQ9H0K4 717 aa18.46■□□□□ 0.55
SHKBP1-207ENST00000595631 ADAMTS7Q9UKP4 1686 aa18.45■□□□□ 0.54
SHKBP1-207ENST00000595631 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
SHKBP1-207ENST00000595631 MTHFSDQ2M296 383 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-207ENST00000595631 PLSCR1O15162 318 aa18.44■□□□□ 0.54
SHKBP1-207ENST00000595631 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
SHKBP1-207ENST00000595631 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
SHKBP1-207ENST00000595631 PROM2Q8N271 834 aa18.43■□□□□ 0.54
SHKBP1-207ENST00000595631 PHACTR3Q96KR7 559 aa18.43■□□□□ 0.54
SHKBP1-207ENST00000595631 TAF1LQ8IZX4 1826 aa18.43■□□□□ 0.54
SHKBP1-207ENST00000595631 PAPPAQ13219 1627 aa18.41■□□□□ 0.54
SHKBP1-207ENST00000595631 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-207ENST00000595631 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
SHKBP1-207ENST00000595631 TUBGCP6Q96RT7 1819 aa18.41■□□□□ 0.54
SHKBP1-207ENST00000595631 C5P01031 1676 aa18.41■□□□□ 0.54
SHKBP1-207ENST00000595631 AKAP4Q5JQC9 854 aa18.4■□□□□ 0.54
SHKBP1-207ENST00000595631 PIGBQ92521 554 aa18.4■□□□□ 0.54
SHKBP1-207ENST00000595631 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-207ENST00000595631 KCNQ4P56696 695 aa18.39■□□□□ 0.53
SHKBP1-207ENST00000595631 CCDC184Q52MB2 194 aa18.39■□□□□ 0.53
SHKBP1-207ENST00000595631 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
SHKBP1-207ENST00000595631 TMOD3Q9NYL9 352 aa18.39■□□□□ 0.53
SHKBP1-207ENST00000595631 PSDA5PKW4 1024 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-207ENST00000595631 FCHSD2O94868 740 aa18.38■□□□□ 0.53
SHKBP1-207ENST00000595631 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
SHKBP1-207ENST00000595631 LRRC4BQ9NT99 713 aa18.37■□□□□ 0.53
SHKBP1-207ENST00000595631 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
SHKBP1-207ENST00000595631 MRC1P22897 1456 aa18.37■□□□□ 0.53
SHKBP1-207ENST00000595631 ERVV-2B6SEH9 535 aa18.36■□□□□ 0.53
SHKBP1-207ENST00000595631 ANP32CO43423 234 aa18.36■□□□□ 0.53
SHKBP1-207ENST00000595631 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
SHKBP1-207ENST00000595631 PALLDQ8WX93 1383 aa18.36■□□□□ 0.53
SHKBP1-207ENST00000595631 ANO8Q9HCE9 1232 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-207ENST00000595631 RNMTO43148 476 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-207ENST00000595631 CABP4P57796 275 aa18.35■□□□□ 0.53
SHKBP1-207ENST00000595631 R3HDM1Q15032 1099 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-207ENST00000595631 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
SHKBP1-207ENST00000595631 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
SHKBP1-207ENST00000595631 CASZ1Q86V15 1759 aa18.33■□□□□ 0.53
SHKBP1-207ENST00000595631 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.53
SHKBP1-207ENST00000595631 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.52
SHKBP1-207ENST00000595631 NFATC2IPQ8NCF5 419 aa18.33■□□□□ 0.52
SHKBP1-207ENST00000595631 ATG3Q9NT62 314 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms